Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y27:X35:X33
Extra
PDB:
ATOM 1 O3' U A 34 -4.281 -6.379 8.510 1.00 49.03 O
ATOM 2 P U A 35 -4.715 -6.649 10.022 1.00 50.03 P
ATOM 3 OP1 U A 35 -6.172 -6.935 10.014 1.00 49.92 O
ATOM 4 OP2 U A 35 -4.181 -5.574 10.888 1.00 49.55 O
ATOM 5 O5' U A 35 -3.947 -7.997 10.373 1.00 48.90 O
ATOM 6 C5' U A 35 -4.221 -9.231 9.724 1.00 47.48 C
ATOM 7 C4' U A 35 -3.112 -10.179 10.132 1.00 47.41 C
ATOM 8 O4' U A 35 -1.857 -9.719 9.574 1.00 47.11 O
ATOM 9 C3' U A 35 -2.882 -10.220 11.639 1.00 47.28 C
ATOM 10 O3' U A 35 -2.994 -11.547 12.094 1.00 46.70 O
ATOM 11 C2' U A 35 -1.489 -9.630 11.851 1.00 47.26 C
ATOM 12 O2' U A 35 -0.784 -10.194 12.938 1.00 47.06 O
ATOM 13 C1' U A 35 -0.863 -10.026 10.522 1.00 48.30 C
ATOM 14 N1 U A 35 0.414 -9.345 10.156 1.00 48.29 N
ATOM 15 C2 U A 35 1.448 -10.127 9.687 1.00 48.50 C
ATOM 16 O2 U A 35 1.355 -11.336 9.560 1.00 49.15 O
ATOM 17 N3 U A 35 2.594 -9.435 9.365 1.00 48.75 N
ATOM 18 C4 U A 35 2.788 -8.064 9.468 1.00 48.76 C
ATOM 19 O4 U A 35 3.859 -7.572 9.145 1.00 49.37 O
ATOM 20 C5 U A 35 1.664 -7.316 9.967 1.00 49.16 C
ATOM 21 C6 U A 35 0.539 -7.973 10.280 1.00 48.72 C
ATOM 22 P C A 36 -3.700 -11.762 13.504 1.00 46.49 P
ATOM 23 OP1 C A 36 -5.019 -11.085 13.530 1.00 45.80 O
ATOM 24 OP2 C A 36 -2.675 -11.471 14.531 1.00 45.28 O
ATOM 25 O5' C A 36 -4.040 -13.311 13.469 1.00 46.83 O
TER
ATOM 1 O3' G B 32 -1.592 -1.597 17.159 1.00 51.97 O
ATOM 2 P U B 33 -2.403 -1.781 15.787 1.00 51.78 P
ATOM 3 OP1 U B 33 -2.438 -0.468 15.108 1.00 52.54 O
ATOM 4 OP2 U B 33 -3.658 -2.521 16.033 1.00 52.05 O
ATOM 5 O5' U B 33 -1.447 -2.748 14.960 1.00 51.31 O
ATOM 6 C5' U B 33 -0.197 -2.320 14.450 1.00 50.40 C
ATOM 7 C4' U B 33 0.445 -3.500 13.749 1.00 49.83 C
ATOM 8 O4' U B 33 0.561 -4.605 14.684 1.00 48.97 O
ATOM 9 C3' U B 33 -0.345 -4.026 12.553 1.00 49.85 C
ATOM 10 O3' U B 33 0.532 -4.216 11.433 1.00 50.21 O
ATOM 11 C2' U B 33 -0.966 -5.327 13.069 1.00 49.26 C
ATOM 12 O2' U B 33 -1.168 -6.306 12.069 1.00 48.45 O
ATOM 13 C1' U B 33 0.109 -5.782 14.053 1.00 48.46 C
ATOM 14 N1 U B 33 -0.375 -6.775 15.067 1.00 48.24 N
ATOM 15 C2 U B 33 0.253 -8.006 15.158 1.00 47.55 C
ATOM 16 O2 U B 33 1.198 -8.339 14.465 1.00 47.14 O
ATOM 17 N3 U B 33 -0.272 -8.850 16.106 1.00 47.21 N
ATOM 18 C4 U B 33 -1.333 -8.598 16.954 1.00 47.42 C
ATOM 19 O4 U B 33 -1.684 -9.453 17.760 1.00 47.77 O
ATOM 20 C5 U B 33 -1.932 -7.295 16.804 1.00 47.86 C
ATOM 21 C6 U B 33 -1.444 -6.451 15.885 1.00 47.96 C
ATOM 22 P U B 34 0.497 -3.145 10.248 1.00 50.17 P
ATOM 23 OP1 U B 34 1.540 -3.501 9.265 1.00 50.91 O
ATOM 24 OP2 U B 34 0.507 -1.799 10.859 1.00 51.41 O
ATOM 25 O5' U B 34 -0.939 -3.401 9.584 1.00 49.73 O
TER
ATOM 2 P U A 35 -4.715 -6.649 10.022 1.00 50.03 P
ATOM 3 OP1 U A 35 -6.172 -6.935 10.014 1.00 49.92 O
ATOM 4 OP2 U A 35 -4.181 -5.574 10.888 1.00 49.55 O
ATOM 5 O5' U A 35 -3.947 -7.997 10.373 1.00 48.90 O
ATOM 6 C5' U A 35 -4.221 -9.231 9.724 1.00 47.48 C
ATOM 7 C4' U A 35 -3.112 -10.179 10.132 1.00 47.41 C
ATOM 8 O4' U A 35 -1.857 -9.719 9.574 1.00 47.11 O
ATOM 9 C3' U A 35 -2.882 -10.220 11.639 1.00 47.28 C
ATOM 10 O3' U A 35 -2.994 -11.547 12.094 1.00 46.70 O
ATOM 11 C2' U A 35 -1.489 -9.630 11.851 1.00 47.26 C
ATOM 12 O2' U A 35 -0.784 -10.194 12.938 1.00 47.06 O
ATOM 13 C1' U A 35 -0.863 -10.026 10.522 1.00 48.30 C
ATOM 14 N1 U A 35 0.414 -9.345 10.156 1.00 48.29 N
ATOM 15 C2 U A 35 1.448 -10.127 9.687 1.00 48.50 C
ATOM 16 O2 U A 35 1.355 -11.336 9.560 1.00 49.15 O
ATOM 17 N3 U A 35 2.594 -9.435 9.365 1.00 48.75 N
ATOM 18 C4 U A 35 2.788 -8.064 9.468 1.00 48.76 C
ATOM 19 O4 U A 35 3.859 -7.572 9.145 1.00 49.37 O
ATOM 20 C5 U A 35 1.664 -7.316 9.967 1.00 49.16 C
ATOM 21 C6 U A 35 0.539 -7.973 10.280 1.00 48.72 C
ATOM 22 P C A 36 -3.700 -11.762 13.504 1.00 46.49 P
ATOM 23 OP1 C A 36 -5.019 -11.085 13.530 1.00 45.80 O
ATOM 24 OP2 C A 36 -2.675 -11.471 14.531 1.00 45.28 O
ATOM 25 O5' C A 36 -4.040 -13.311 13.469 1.00 46.83 O
TER
ATOM 1 O3' G B 32 -1.592 -1.597 17.159 1.00 51.97 O
ATOM 2 P U B 33 -2.403 -1.781 15.787 1.00 51.78 P
ATOM 3 OP1 U B 33 -2.438 -0.468 15.108 1.00 52.54 O
ATOM 4 OP2 U B 33 -3.658 -2.521 16.033 1.00 52.05 O
ATOM 5 O5' U B 33 -1.447 -2.748 14.960 1.00 51.31 O
ATOM 6 C5' U B 33 -0.197 -2.320 14.450 1.00 50.40 C
ATOM 7 C4' U B 33 0.445 -3.500 13.749 1.00 49.83 C
ATOM 8 O4' U B 33 0.561 -4.605 14.684 1.00 48.97 O
ATOM 9 C3' U B 33 -0.345 -4.026 12.553 1.00 49.85 C
ATOM 10 O3' U B 33 0.532 -4.216 11.433 1.00 50.21 O
ATOM 11 C2' U B 33 -0.966 -5.327 13.069 1.00 49.26 C
ATOM 12 O2' U B 33 -1.168 -6.306 12.069 1.00 48.45 O
ATOM 13 C1' U B 33 0.109 -5.782 14.053 1.00 48.46 C
ATOM 14 N1 U B 33 -0.375 -6.775 15.067 1.00 48.24 N
ATOM 15 C2 U B 33 0.253 -8.006 15.158 1.00 47.55 C
ATOM 16 O2 U B 33 1.198 -8.339 14.465 1.00 47.14 O
ATOM 17 N3 U B 33 -0.272 -8.850 16.106 1.00 47.21 N
ATOM 18 C4 U B 33 -1.333 -8.598 16.954 1.00 47.42 C
ATOM 19 O4 U B 33 -1.684 -9.453 17.760 1.00 47.77 O
ATOM 20 C5 U B 33 -1.932 -7.295 16.804 1.00 47.86 C
ATOM 21 C6 U B 33 -1.444 -6.451 15.885 1.00 47.96 C
ATOM 22 P U B 34 0.497 -3.145 10.248 1.00 50.17 P
ATOM 23 OP1 U B 34 1.540 -3.501 9.265 1.00 50.91 O
ATOM 24 OP2 U B 34 0.507 -1.799 10.859 1.00 51.41 O
ATOM 25 O5' U B 34 -0.939 -3.401 9.584 1.00 49.73 O
TER
Atoms:
C4: (2.788,-8.064,9.468)
N3: (2.594,-9.435,9.365)
OP1: (-6.172,-6.935,10.014)
OP2: (-4.181,-5.574,10.888)
C2: (1.448,-10.127,9.687)
C1': (-0.863,-10.026,10.522)
C3': (-2.882,-10.220,11.639)
O5': (-3.947,-7.997,10.373)
O4': (-1.857,-9.719,9.574)
C5': (-4.221,-9.231,9.724)
P: (-4.715,-6.649,10.022)
C4': (-3.112,-10.179,10.132)
C2': (-1.489,-9.630,11.851)
O2': (-0.784,-10.194,12.938)
N1: (0.414,-9.345,10.156)
O4: (3.859,-7.572,9.145)
O2: (1.355,-11.336,9.560)
C6: (0.539,-7.973,10.280)
C5: (1.664,-7.316,9.967)
O3': (-2.994,-11.547,12.094)
N3: (2.594,-9.435,9.365)
OP1: (-6.172,-6.935,10.014)
OP2: (-4.181,-5.574,10.888)
C2: (1.448,-10.127,9.687)
C1': (-0.863,-10.026,10.522)
C3': (-2.882,-10.220,11.639)
O5': (-3.947,-7.997,10.373)
O4': (-1.857,-9.719,9.574)
C5': (-4.221,-9.231,9.724)
P: (-4.715,-6.649,10.022)
C4': (-3.112,-10.179,10.132)
C2': (-1.489,-9.630,11.851)
O2': (-0.784,-10.194,12.938)
N1: (0.414,-9.345,10.156)
O4: (3.859,-7.572,9.145)
O2: (1.355,-11.336,9.560)
C6: (0.539,-7.973,10.280)
C5: (1.664,-7.316,9.967)
O3': (-2.994,-11.547,12.094)
C4: (-1.333,-8.598,16.954)
N3: (-0.272,-8.850,16.106)
OP1: (-2.438,-0.468,15.108)
OP2: (-3.658,-2.521,16.033)
C2: (0.253,-8.006,15.158)
C1': (0.109,-5.782,14.053)
C3': (-0.345,-4.026,12.553)
O5': (-1.447,-2.748,14.960)
O4': (0.561,-4.605,14.684)
C5': (-0.197,-2.320,14.450)
P: (-2.403,-1.781,15.787)
C4': (0.445,-3.500,13.749)
C2': (-0.966,-5.327,13.069)
O2': (-1.168,-6.306,12.069)
N1: (-0.375,-6.775,15.067)
O4: (-1.684,-9.453,17.760)
O2: (1.198,-8.339,14.465)
C6: (-1.444,-6.451,15.885)
C5: (-1.932,-7.295,16.804)
O3': (0.532,-4.216,11.433)
N3: (-0.272,-8.850,16.106)
OP1: (-2.438,-0.468,15.108)
OP2: (-3.658,-2.521,16.033)
C2: (0.253,-8.006,15.158)
C1': (0.109,-5.782,14.053)
C3': (-0.345,-4.026,12.553)
O5': (-1.447,-2.748,14.960)
O4': (0.561,-4.605,14.684)
C5': (-0.197,-2.320,14.450)
P: (-2.403,-1.781,15.787)
C4': (0.445,-3.500,13.749)
C2': (-0.966,-5.327,13.069)
O2': (-1.168,-6.306,12.069)
N1: (-0.375,-6.775,15.067)
O4: (-1.684,-9.453,17.760)
O2: (1.198,-8.339,14.465)
C6: (-1.444,-6.451,15.885)
C5: (-1.932,-7.295,16.804)
O3': (0.532,-4.216,11.433)
Image (generated by PyMOL):