Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y27:X8:X33
Extra
PDB:
ATOM 1 O3' A A 7 3.686 -2.816 13.484 1.00 51.06 O
ATOM 2 P U A 8 4.179 -1.557 14.341 1.00 51.80 P
ATOM 3 OP1 U A 8 3.115 -1.264 15.329 1.00 52.60 O
ATOM 4 OP2 U A 8 4.619 -0.503 13.405 1.00 53.78 O
ATOM 5 O5' U A 8 5.486 -2.092 15.075 1.00 51.92 O
ATOM 6 C5' U A 8 5.987 -1.591 16.311 1.00 51.19 C
ATOM 7 C4' U A 8 6.879 -2.668 16.919 1.00 50.54 C
ATOM 8 O4' U A 8 6.085 -3.508 17.802 1.00 49.87 O
ATOM 9 C3' U A 8 7.528 -3.610 15.901 1.00 50.18 C
ATOM 10 O3' U A 8 8.841 -4.010 16.296 1.00 50.74 O
ATOM 11 C2' U A 8 6.571 -4.801 15.910 1.00 49.88 C
ATOM 12 O2' U A 8 7.179 -6.015 15.523 1.00 50.30 O
ATOM 13 C1' U A 8 6.142 -4.856 17.374 1.00 49.31 C
ATOM 14 N1 U A 8 4.810 -5.528 17.606 1.00 48.69 N
ATOM 15 C2 U A 8 4.761 -6.733 18.298 1.00 48.37 C
ATOM 16 O2 U A 8 5.739 -7.303 18.751 1.00 48.30 O
ATOM 17 N3 U A 8 3.503 -7.270 18.451 1.00 48.26 N
ATOM 18 C4 U A 8 2.310 -6.730 17.998 1.00 48.82 C
ATOM 19 O4 U A 8 1.260 -7.321 18.216 1.00 48.52 O
ATOM 20 C5 U A 8 2.436 -5.476 17.289 1.00 48.77 C
ATOM 21 C6 U A 8 3.654 -4.937 17.122 1.00 48.33 C
ATOM 22 P A A 9 10.175 -3.136 16.115 1.00 50.23 P
ATOM 23 OP1 A A 9 10.011 -2.092 15.086 1.00 50.23 O
ATOM 24 OP2 A A 9 11.282 -4.109 15.975 1.00 50.55 O
ATOM 25 O5' A A 9 10.282 -2.385 17.519 1.00 50.12 O
TER
ATOM 1 O3' G B 32 -1.592 -1.597 17.159 1.00 51.97 O
ATOM 2 P U B 33 -2.403 -1.781 15.787 1.00 51.78 P
ATOM 3 OP1 U B 33 -2.438 -0.468 15.108 1.00 52.54 O
ATOM 4 OP2 U B 33 -3.658 -2.521 16.033 1.00 52.05 O
ATOM 5 O5' U B 33 -1.447 -2.748 14.960 1.00 51.31 O
ATOM 6 C5' U B 33 -0.197 -2.320 14.450 1.00 50.40 C
ATOM 7 C4' U B 33 0.445 -3.500 13.749 1.00 49.83 C
ATOM 8 O4' U B 33 0.561 -4.605 14.684 1.00 48.97 O
ATOM 9 C3' U B 33 -0.345 -4.026 12.553 1.00 49.85 C
ATOM 10 O3' U B 33 0.532 -4.216 11.433 1.00 50.21 O
ATOM 11 C2' U B 33 -0.966 -5.327 13.069 1.00 49.26 C
ATOM 12 O2' U B 33 -1.168 -6.306 12.069 1.00 48.45 O
ATOM 13 C1' U B 33 0.109 -5.782 14.053 1.00 48.46 C
ATOM 14 N1 U B 33 -0.375 -6.775 15.067 1.00 48.24 N
ATOM 15 C2 U B 33 0.253 -8.006 15.158 1.00 47.55 C
ATOM 16 O2 U B 33 1.198 -8.339 14.465 1.00 47.14 O
ATOM 17 N3 U B 33 -0.272 -8.850 16.106 1.00 47.21 N
ATOM 18 C4 U B 33 -1.333 -8.598 16.954 1.00 47.42 C
ATOM 19 O4 U B 33 -1.684 -9.453 17.760 1.00 47.77 O
ATOM 20 C5 U B 33 -1.932 -7.295 16.804 1.00 47.86 C
ATOM 21 C6 U B 33 -1.444 -6.451 15.885 1.00 47.96 C
ATOM 22 P U B 34 0.497 -3.145 10.248 1.00 50.17 P
ATOM 23 OP1 U B 34 1.540 -3.501 9.265 1.00 50.91 O
ATOM 24 OP2 U B 34 0.507 -1.799 10.859 1.00 51.41 O
ATOM 25 O5' U B 34 -0.939 -3.401 9.584 1.00 49.73 O
TER
ATOM 2 P U A 8 4.179 -1.557 14.341 1.00 51.80 P
ATOM 3 OP1 U A 8 3.115 -1.264 15.329 1.00 52.60 O
ATOM 4 OP2 U A 8 4.619 -0.503 13.405 1.00 53.78 O
ATOM 5 O5' U A 8 5.486 -2.092 15.075 1.00 51.92 O
ATOM 6 C5' U A 8 5.987 -1.591 16.311 1.00 51.19 C
ATOM 7 C4' U A 8 6.879 -2.668 16.919 1.00 50.54 C
ATOM 8 O4' U A 8 6.085 -3.508 17.802 1.00 49.87 O
ATOM 9 C3' U A 8 7.528 -3.610 15.901 1.00 50.18 C
ATOM 10 O3' U A 8 8.841 -4.010 16.296 1.00 50.74 O
ATOM 11 C2' U A 8 6.571 -4.801 15.910 1.00 49.88 C
ATOM 12 O2' U A 8 7.179 -6.015 15.523 1.00 50.30 O
ATOM 13 C1' U A 8 6.142 -4.856 17.374 1.00 49.31 C
ATOM 14 N1 U A 8 4.810 -5.528 17.606 1.00 48.69 N
ATOM 15 C2 U A 8 4.761 -6.733 18.298 1.00 48.37 C
ATOM 16 O2 U A 8 5.739 -7.303 18.751 1.00 48.30 O
ATOM 17 N3 U A 8 3.503 -7.270 18.451 1.00 48.26 N
ATOM 18 C4 U A 8 2.310 -6.730 17.998 1.00 48.82 C
ATOM 19 O4 U A 8 1.260 -7.321 18.216 1.00 48.52 O
ATOM 20 C5 U A 8 2.436 -5.476 17.289 1.00 48.77 C
ATOM 21 C6 U A 8 3.654 -4.937 17.122 1.00 48.33 C
ATOM 22 P A A 9 10.175 -3.136 16.115 1.00 50.23 P
ATOM 23 OP1 A A 9 10.011 -2.092 15.086 1.00 50.23 O
ATOM 24 OP2 A A 9 11.282 -4.109 15.975 1.00 50.55 O
ATOM 25 O5' A A 9 10.282 -2.385 17.519 1.00 50.12 O
TER
ATOM 1 O3' G B 32 -1.592 -1.597 17.159 1.00 51.97 O
ATOM 2 P U B 33 -2.403 -1.781 15.787 1.00 51.78 P
ATOM 3 OP1 U B 33 -2.438 -0.468 15.108 1.00 52.54 O
ATOM 4 OP2 U B 33 -3.658 -2.521 16.033 1.00 52.05 O
ATOM 5 O5' U B 33 -1.447 -2.748 14.960 1.00 51.31 O
ATOM 6 C5' U B 33 -0.197 -2.320 14.450 1.00 50.40 C
ATOM 7 C4' U B 33 0.445 -3.500 13.749 1.00 49.83 C
ATOM 8 O4' U B 33 0.561 -4.605 14.684 1.00 48.97 O
ATOM 9 C3' U B 33 -0.345 -4.026 12.553 1.00 49.85 C
ATOM 10 O3' U B 33 0.532 -4.216 11.433 1.00 50.21 O
ATOM 11 C2' U B 33 -0.966 -5.327 13.069 1.00 49.26 C
ATOM 12 O2' U B 33 -1.168 -6.306 12.069 1.00 48.45 O
ATOM 13 C1' U B 33 0.109 -5.782 14.053 1.00 48.46 C
ATOM 14 N1 U B 33 -0.375 -6.775 15.067 1.00 48.24 N
ATOM 15 C2 U B 33 0.253 -8.006 15.158 1.00 47.55 C
ATOM 16 O2 U B 33 1.198 -8.339 14.465 1.00 47.14 O
ATOM 17 N3 U B 33 -0.272 -8.850 16.106 1.00 47.21 N
ATOM 18 C4 U B 33 -1.333 -8.598 16.954 1.00 47.42 C
ATOM 19 O4 U B 33 -1.684 -9.453 17.760 1.00 47.77 O
ATOM 20 C5 U B 33 -1.932 -7.295 16.804 1.00 47.86 C
ATOM 21 C6 U B 33 -1.444 -6.451 15.885 1.00 47.96 C
ATOM 22 P U B 34 0.497 -3.145 10.248 1.00 50.17 P
ATOM 23 OP1 U B 34 1.540 -3.501 9.265 1.00 50.91 O
ATOM 24 OP2 U B 34 0.507 -1.799 10.859 1.00 51.41 O
ATOM 25 O5' U B 34 -0.939 -3.401 9.584 1.00 49.73 O
TER
Atoms:
C4: (2.310,-6.730,17.998)
N3: (3.503,-7.270,18.451)
OP1: (3.115,-1.264,15.329)
OP2: (4.619,-0.503,13.405)
C2: (4.761,-6.733,18.298)
C1': (6.142,-4.856,17.374)
C3': (7.528,-3.610,15.901)
O5': (5.486,-2.092,15.075)
O4': (6.085,-3.508,17.802)
C5': (5.987,-1.591,16.311)
P: (4.179,-1.557,14.341)
C4': (6.879,-2.668,16.919)
C2': (6.571,-4.801,15.910)
O2': (7.179,-6.015,15.523)
N1: (4.810,-5.528,17.606)
O4: (1.260,-7.321,18.216)
O2: (5.739,-7.303,18.751)
C6: (3.654,-4.937,17.122)
C5: (2.436,-5.476,17.289)
O3': (8.841,-4.010,16.296)
N3: (3.503,-7.270,18.451)
OP1: (3.115,-1.264,15.329)
OP2: (4.619,-0.503,13.405)
C2: (4.761,-6.733,18.298)
C1': (6.142,-4.856,17.374)
C3': (7.528,-3.610,15.901)
O5': (5.486,-2.092,15.075)
O4': (6.085,-3.508,17.802)
C5': (5.987,-1.591,16.311)
P: (4.179,-1.557,14.341)
C4': (6.879,-2.668,16.919)
C2': (6.571,-4.801,15.910)
O2': (7.179,-6.015,15.523)
N1: (4.810,-5.528,17.606)
O4: (1.260,-7.321,18.216)
O2: (5.739,-7.303,18.751)
C6: (3.654,-4.937,17.122)
C5: (2.436,-5.476,17.289)
O3': (8.841,-4.010,16.296)
C4: (-1.333,-8.598,16.954)
N3: (-0.272,-8.850,16.106)
OP1: (-2.438,-0.468,15.108)
OP2: (-3.658,-2.521,16.033)
C2: (0.253,-8.006,15.158)
C1': (0.109,-5.782,14.053)
C3': (-0.345,-4.026,12.553)
O5': (-1.447,-2.748,14.960)
O4': (0.561,-4.605,14.684)
C5': (-0.197,-2.320,14.450)
P: (-2.403,-1.781,15.787)
C4': (0.445,-3.500,13.749)
C2': (-0.966,-5.327,13.069)
O2': (-1.168,-6.306,12.069)
N1: (-0.375,-6.775,15.067)
O4: (-1.684,-9.453,17.760)
O2: (1.198,-8.339,14.465)
C6: (-1.444,-6.451,15.885)
C5: (-1.932,-7.295,16.804)
O3': (0.532,-4.216,11.433)
N3: (-0.272,-8.850,16.106)
OP1: (-2.438,-0.468,15.108)
OP2: (-3.658,-2.521,16.033)
C2: (0.253,-8.006,15.158)
C1': (0.109,-5.782,14.053)
C3': (-0.345,-4.026,12.553)
O5': (-1.447,-2.748,14.960)
O4': (0.561,-4.605,14.684)
C5': (-0.197,-2.320,14.450)
P: (-2.403,-1.781,15.787)
C4': (0.445,-3.500,13.749)
C2': (-0.966,-5.327,13.069)
O2': (-1.168,-6.306,12.069)
N1: (-0.375,-6.775,15.067)
O4: (-1.684,-9.453,17.760)
O2: (1.198,-8.339,14.465)
C6: (-1.444,-6.451,15.885)
C5: (-1.932,-7.295,16.804)
O3': (0.532,-4.216,11.433)
Image (generated by PyMOL):