Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02355:02353
Extra
PDB:
ATOM 1 O3' A A2354 69.780 107.790 151.547 1.00 68.20 O
ATOM 2 P U A2355 69.626 107.311 150.022 1.00 67.10 P
ATOM 3 OP1 U A2355 68.901 108.375 149.280 1.00 66.06 O
ATOM 4 OP2 U A2355 69.083 105.924 150.047 1.00 66.27 O
ATOM 5 O5' U A2355 71.120 107.253 149.473 1.00 64.18 O
ATOM 6 C5' U A2355 71.947 108.431 149.440 1.00 63.31 C
ATOM 7 C4' U A2355 73.371 108.056 149.107 1.00 63.24 C
ATOM 8 O4' U A2355 73.914 107.216 150.160 1.00 62.17 O
ATOM 9 C3' U A2355 73.536 107.212 147.857 1.00 64.23 C
ATOM 10 O3' U A2355 73.512 108.001 146.675 1.00 66.20 O
ATOM 11 C2' U A2355 74.877 106.536 148.101 1.00 63.47 C
ATOM 12 O2' U A2355 75.976 107.395 147.872 1.00 65.82 O
ATOM 13 C1' U A2355 74.787 106.248 149.598 1.00 62.00 C
ATOM 14 N1 U A2355 74.264 104.905 149.900 1.00 61.48 N
ATOM 15 C2 U A2355 75.165 103.849 149.907 1.00 62.50 C
ATOM 16 O2 U A2355 76.355 103.984 149.647 1.00 63.58 O
ATOM 17 N3 U A2355 74.621 102.626 150.223 1.00 61.54 N
ATOM 18 C4 U A2355 73.299 102.353 150.518 1.00 61.53 C
ATOM 19 O4 U A2355 72.972 101.205 150.829 1.00 60.71 O
ATOM 20 C5 U A2355 72.432 103.489 150.472 1.00 60.74 C
ATOM 21 C6 U A2355 72.929 104.694 150.174 1.00 60.82 C
ATOM 22 P C A2356 72.969 107.358 145.307 1.00 66.58 P
ATOM 23 OP1 C A2356 73.000 108.438 144.286 1.00 65.92 O
ATOM 24 OP2 C A2356 71.692 106.649 145.590 1.00 65.31 O
ATOM 25 O5' C A2356 74.076 106.271 144.936 1.00 67.57 O
TER
ATOM 1 O3' A B2352 72.215 97.171 153.352 1.00 95.56 O
ATOM 2 P U B2353 71.246 97.919 154.404 1.00 93.63 P
ATOM 3 OP1 U B2353 72.084 98.741 155.309 1.00 93.61 O
ATOM 4 OP2 U B2353 70.332 96.902 154.978 1.00 93.92 O
ATOM 5 O5' U B2353 70.378 98.914 153.513 1.00 93.73 O
ATOM 6 C5' U B2353 71.006 99.842 152.603 1.00 93.45 C
ATOM 7 C4' U B2353 70.011 100.319 151.567 1.00 93.20 C
ATOM 8 O4' U B2353 69.479 99.179 150.845 1.00 94.26 O
ATOM 9 C3' U B2353 68.785 101.044 152.105 1.00 92.08 C
ATOM 10 O3' U B2353 69.087 102.425 152.257 1.00 89.34 O
ATOM 11 C2' U B2353 67.756 100.821 151.002 1.00 93.07 C
ATOM 12 O2' U B2353 67.919 101.715 149.916 1.00 92.12 O
ATOM 13 C1' U B2353 68.113 99.407 150.532 1.00 94.47 C
ATOM 14 N1 U B2353 67.311 98.321 151.119 1.00 95.72 N
ATOM 15 C2 U B2353 66.105 98.000 150.510 1.00 96.64 C
ATOM 16 O2 U B2353 65.662 98.603 149.539 1.00 96.63 O
ATOM 17 N3 U B2353 65.435 96.944 151.079 1.00 97.03 N
ATOM 18 C4 U B2353 65.832 96.194 152.167 1.00 97.06 C
ATOM 19 O4 U B2353 65.156 95.223 152.510 1.00 98.75 O
ATOM 20 C5 U B2353 67.069 96.602 152.754 1.00 96.54 C
ATOM 21 C6 U B2353 67.748 97.624 152.228 1.00 95.80 C
ATOM 22 P A B2354 68.488 103.255 153.493 1.00 86.47 P
ATOM 23 OP1 A B2354 68.754 102.484 154.735 1.00 86.28 O
ATOM 24 OP2 A B2354 67.094 103.647 153.156 1.00 86.27 O
ATOM 25 O5' A B2354 69.410 104.556 153.513 1.00 81.92 O
TER
ATOM 2 P U A2355 69.626 107.311 150.022 1.00 67.10 P
ATOM 3 OP1 U A2355 68.901 108.375 149.280 1.00 66.06 O
ATOM 4 OP2 U A2355 69.083 105.924 150.047 1.00 66.27 O
ATOM 5 O5' U A2355 71.120 107.253 149.473 1.00 64.18 O
ATOM 6 C5' U A2355 71.947 108.431 149.440 1.00 63.31 C
ATOM 7 C4' U A2355 73.371 108.056 149.107 1.00 63.24 C
ATOM 8 O4' U A2355 73.914 107.216 150.160 1.00 62.17 O
ATOM 9 C3' U A2355 73.536 107.212 147.857 1.00 64.23 C
ATOM 10 O3' U A2355 73.512 108.001 146.675 1.00 66.20 O
ATOM 11 C2' U A2355 74.877 106.536 148.101 1.00 63.47 C
ATOM 12 O2' U A2355 75.976 107.395 147.872 1.00 65.82 O
ATOM 13 C1' U A2355 74.787 106.248 149.598 1.00 62.00 C
ATOM 14 N1 U A2355 74.264 104.905 149.900 1.00 61.48 N
ATOM 15 C2 U A2355 75.165 103.849 149.907 1.00 62.50 C
ATOM 16 O2 U A2355 76.355 103.984 149.647 1.00 63.58 O
ATOM 17 N3 U A2355 74.621 102.626 150.223 1.00 61.54 N
ATOM 18 C4 U A2355 73.299 102.353 150.518 1.00 61.53 C
ATOM 19 O4 U A2355 72.972 101.205 150.829 1.00 60.71 O
ATOM 20 C5 U A2355 72.432 103.489 150.472 1.00 60.74 C
ATOM 21 C6 U A2355 72.929 104.694 150.174 1.00 60.82 C
ATOM 22 P C A2356 72.969 107.358 145.307 1.00 66.58 P
ATOM 23 OP1 C A2356 73.000 108.438 144.286 1.00 65.92 O
ATOM 24 OP2 C A2356 71.692 106.649 145.590 1.00 65.31 O
ATOM 25 O5' C A2356 74.076 106.271 144.936 1.00 67.57 O
TER
ATOM 1 O3' A B2352 72.215 97.171 153.352 1.00 95.56 O
ATOM 2 P U B2353 71.246 97.919 154.404 1.00 93.63 P
ATOM 3 OP1 U B2353 72.084 98.741 155.309 1.00 93.61 O
ATOM 4 OP2 U B2353 70.332 96.902 154.978 1.00 93.92 O
ATOM 5 O5' U B2353 70.378 98.914 153.513 1.00 93.73 O
ATOM 6 C5' U B2353 71.006 99.842 152.603 1.00 93.45 C
ATOM 7 C4' U B2353 70.011 100.319 151.567 1.00 93.20 C
ATOM 8 O4' U B2353 69.479 99.179 150.845 1.00 94.26 O
ATOM 9 C3' U B2353 68.785 101.044 152.105 1.00 92.08 C
ATOM 10 O3' U B2353 69.087 102.425 152.257 1.00 89.34 O
ATOM 11 C2' U B2353 67.756 100.821 151.002 1.00 93.07 C
ATOM 12 O2' U B2353 67.919 101.715 149.916 1.00 92.12 O
ATOM 13 C1' U B2353 68.113 99.407 150.532 1.00 94.47 C
ATOM 14 N1 U B2353 67.311 98.321 151.119 1.00 95.72 N
ATOM 15 C2 U B2353 66.105 98.000 150.510 1.00 96.64 C
ATOM 16 O2 U B2353 65.662 98.603 149.539 1.00 96.63 O
ATOM 17 N3 U B2353 65.435 96.944 151.079 1.00 97.03 N
ATOM 18 C4 U B2353 65.832 96.194 152.167 1.00 97.06 C
ATOM 19 O4 U B2353 65.156 95.223 152.510 1.00 98.75 O
ATOM 20 C5 U B2353 67.069 96.602 152.754 1.00 96.54 C
ATOM 21 C6 U B2353 67.748 97.624 152.228 1.00 95.80 C
ATOM 22 P A B2354 68.488 103.255 153.493 1.00 86.47 P
ATOM 23 OP1 A B2354 68.754 102.484 154.735 1.00 86.28 O
ATOM 24 OP2 A B2354 67.094 103.647 153.156 1.00 86.27 O
ATOM 25 O5' A B2354 69.410 104.556 153.513 1.00 81.92 O
TER
Atoms:
C4: (73.299,102.353,150.518)
N3: (74.621,102.626,150.223)
OP1: (68.901,108.375,149.280)
OP2: (69.083,105.924,150.047)
C2: (75.165,103.849,149.907)
C1': (74.787,106.248,149.598)
C3': (73.536,107.212,147.857)
O5': (71.120,107.253,149.473)
O4': (73.914,107.216,150.160)
C5': (71.947,108.431,149.440)
P: (69.626,107.311,150.022)
C4': (73.371,108.056,149.107)
C2': (74.877,106.536,148.101)
O2': (75.976,107.395,147.872)
N1: (74.264,104.905,149.900)
O4: (72.972,101.205,150.829)
O2: (76.355,103.984,149.647)
C6: (72.929,104.694,150.174)
C5: (72.432,103.489,150.472)
O3': (73.512,108.001,146.675)
N3: (74.621,102.626,150.223)
OP1: (68.901,108.375,149.280)
OP2: (69.083,105.924,150.047)
C2: (75.165,103.849,149.907)
C1': (74.787,106.248,149.598)
C3': (73.536,107.212,147.857)
O5': (71.120,107.253,149.473)
O4': (73.914,107.216,150.160)
C5': (71.947,108.431,149.440)
P: (69.626,107.311,150.022)
C4': (73.371,108.056,149.107)
C2': (74.877,106.536,148.101)
O2': (75.976,107.395,147.872)
N1: (74.264,104.905,149.900)
O4: (72.972,101.205,150.829)
O2: (76.355,103.984,149.647)
C6: (72.929,104.694,150.174)
C5: (72.432,103.489,150.472)
O3': (73.512,108.001,146.675)
C4: (65.832,96.194,152.167)
N3: (65.435,96.944,151.079)
OP1: (72.084,98.741,155.309)
OP2: (70.332,96.902,154.978)
C2: (66.105,98.000,150.510)
C1': (68.113,99.407,150.532)
C3': (68.785,101.044,152.105)
O5': (70.378,98.914,153.513)
O4': (69.479,99.179,150.845)
C5': (71.006,99.842,152.603)
P: (71.246,97.919,154.404)
C4': (70.011,100.319,151.567)
C2': (67.756,100.821,151.002)
O2': (67.919,101.715,149.916)
N1: (67.311,98.321,151.119)
O4: (65.156,95.223,152.510)
O2: (65.662,98.603,149.539)
C6: (67.748,97.624,152.228)
C5: (67.069,96.602,152.754)
O3': (69.087,102.425,152.257)
N3: (65.435,96.944,151.079)
OP1: (72.084,98.741,155.309)
OP2: (70.332,96.902,154.978)
C2: (66.105,98.000,150.510)
C1': (68.113,99.407,150.532)
C3': (68.785,101.044,152.105)
O5': (70.378,98.914,153.513)
O4': (69.479,99.179,150.845)
C5': (71.006,99.842,152.603)
P: (71.246,97.919,154.404)
C4': (70.011,100.319,151.567)
C2': (67.756,100.821,151.002)
O2': (67.919,101.715,149.916)
N1: (67.311,98.321,151.119)
O4: (65.156,95.223,152.510)
O2: (65.662,98.603,149.539)
C6: (67.748,97.624,152.228)
C5: (67.069,96.602,152.754)
O3': (69.087,102.425,152.257)
Image (generated by PyMOL):