Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0891:0890
Extra
PDB:
ATOM 1 O3' U A 890 39.696 114.095 72.823 1.00 24.10 O
ATOM 2 P U A 891 38.581 113.281 73.648 1.00 25.67 P
ATOM 3 OP1 U A 891 38.952 113.226 75.080 1.00 25.41 O
ATOM 4 OP2 U A 891 38.286 112.024 72.930 1.00 26.12 O
ATOM 5 O5' U A 891 37.292 114.193 73.507 1.00 24.68 O
ATOM 6 C5' U A 891 37.109 115.365 74.305 1.00 24.10 C
ATOM 7 C4' U A 891 36.134 116.286 73.623 1.00 26.39 C
ATOM 8 O4' U A 891 36.820 117.025 72.577 1.00 27.16 O
ATOM 9 C3' U A 891 34.960 115.575 72.949 1.00 26.15 C
ATOM 10 O3' U A 891 33.790 116.356 73.027 1.00 26.07 O
ATOM 11 C2' U A 891 35.411 115.484 71.501 1.00 25.88 C
ATOM 12 O2' U A 891 34.320 115.394 70.610 1.00 23.95 O
ATOM 13 C1' U A 891 36.174 116.798 71.343 1.00 27.80 C
ATOM 14 N1 U A 891 37.190 116.738 70.285 1.00 29.06 N
ATOM 15 C2 U A 891 36.887 117.340 69.080 1.00 29.20 C
ATOM 16 O2 U A 891 35.861 117.959 68.892 1.00 29.87 O
ATOM 17 N3 U A 891 37.838 117.198 68.105 1.00 29.96 N
ATOM 18 C4 U A 891 39.045 116.547 68.215 1.00 30.34 C
ATOM 19 O4 U A 891 39.779 116.473 67.232 1.00 31.99 O
ATOM 20 C5 U A 891 39.303 115.978 69.504 1.00 31.26 C
ATOM 21 C6 U A 891 38.388 116.089 70.472 1.00 29.68 C
ATOM 22 P C A 892 32.699 116.014 74.140 1.00 29.68 P
ATOM 23 OP1 C A 892 31.603 117.003 74.014 1.00 28.60 O
ATOM 24 OP2 C A 892 33.413 115.873 75.425 1.00 27.62 O
ATOM 25 O5' C A 892 32.172 114.566 73.739 1.00 30.32 O
TER
ATOM 1 O3' G B 889 43.361 116.565 77.200 1.00 26.34 O
ATOM 2 P U B 890 42.177 115.512 76.938 1.00 23.95 P
ATOM 3 OP1 U B 890 40.899 116.257 77.092 1.00 22.39 O
ATOM 4 OP2 U B 890 42.427 114.318 77.753 1.00 22.42 O
ATOM 5 O5' U B 890 42.369 115.078 75.415 1.00 21.86 O
ATOM 6 C5' U B 890 41.924 115.919 74.329 1.00 21.18 C
ATOM 7 C4' U B 890 41.897 115.131 73.040 1.00 23.84 C
ATOM 8 O4' U B 890 43.240 114.681 72.727 1.00 26.38 O
ATOM 9 C3' U B 890 41.078 113.843 73.054 1.00 25.11 C
ATOM 10 O3' U B 890 39.696 114.095 72.823 1.00 24.10 O
ATOM 11 C2' U B 890 41.704 113.049 71.917 1.00 24.95 C
ATOM 12 O2' U B 890 41.275 113.472 70.649 1.00 26.98 O
ATOM 13 C1' U B 890 43.179 113.421 72.069 1.00 25.36 C
ATOM 14 N1 U B 890 43.896 112.419 72.867 1.00 22.98 N
ATOM 15 C2 U B 890 44.269 111.271 72.221 1.00 25.75 C
ATOM 16 O2 U B 890 44.081 111.097 71.029 1.00 29.79 O
ATOM 17 N3 U B 890 44.865 110.327 73.014 1.00 25.84 N
ATOM 18 C4 U B 890 45.121 110.421 74.361 1.00 25.57 C
ATOM 19 O4 U B 890 45.507 109.425 74.968 1.00 25.66 O
ATOM 20 C5 U B 890 44.745 111.663 74.948 1.00 24.36 C
ATOM 21 C6 U B 890 44.161 112.596 74.197 1.00 23.61 C
ATOM 22 P U B 891 38.581 113.281 73.648 1.00 25.67 P
ATOM 23 OP1 U B 891 38.952 113.226 75.080 1.00 25.41 O
ATOM 24 OP2 U B 891 38.286 112.024 72.930 1.00 26.12 O
ATOM 25 O5' U B 891 37.292 114.193 73.507 1.00 24.68 O
TER
ATOM 2 P U A 891 38.581 113.281 73.648 1.00 25.67 P
ATOM 3 OP1 U A 891 38.952 113.226 75.080 1.00 25.41 O
ATOM 4 OP2 U A 891 38.286 112.024 72.930 1.00 26.12 O
ATOM 5 O5' U A 891 37.292 114.193 73.507 1.00 24.68 O
ATOM 6 C5' U A 891 37.109 115.365 74.305 1.00 24.10 C
ATOM 7 C4' U A 891 36.134 116.286 73.623 1.00 26.39 C
ATOM 8 O4' U A 891 36.820 117.025 72.577 1.00 27.16 O
ATOM 9 C3' U A 891 34.960 115.575 72.949 1.00 26.15 C
ATOM 10 O3' U A 891 33.790 116.356 73.027 1.00 26.07 O
ATOM 11 C2' U A 891 35.411 115.484 71.501 1.00 25.88 C
ATOM 12 O2' U A 891 34.320 115.394 70.610 1.00 23.95 O
ATOM 13 C1' U A 891 36.174 116.798 71.343 1.00 27.80 C
ATOM 14 N1 U A 891 37.190 116.738 70.285 1.00 29.06 N
ATOM 15 C2 U A 891 36.887 117.340 69.080 1.00 29.20 C
ATOM 16 O2 U A 891 35.861 117.959 68.892 1.00 29.87 O
ATOM 17 N3 U A 891 37.838 117.198 68.105 1.00 29.96 N
ATOM 18 C4 U A 891 39.045 116.547 68.215 1.00 30.34 C
ATOM 19 O4 U A 891 39.779 116.473 67.232 1.00 31.99 O
ATOM 20 C5 U A 891 39.303 115.978 69.504 1.00 31.26 C
ATOM 21 C6 U A 891 38.388 116.089 70.472 1.00 29.68 C
ATOM 22 P C A 892 32.699 116.014 74.140 1.00 29.68 P
ATOM 23 OP1 C A 892 31.603 117.003 74.014 1.00 28.60 O
ATOM 24 OP2 C A 892 33.413 115.873 75.425 1.00 27.62 O
ATOM 25 O5' C A 892 32.172 114.566 73.739 1.00 30.32 O
TER
ATOM 1 O3' G B 889 43.361 116.565 77.200 1.00 26.34 O
ATOM 2 P U B 890 42.177 115.512 76.938 1.00 23.95 P
ATOM 3 OP1 U B 890 40.899 116.257 77.092 1.00 22.39 O
ATOM 4 OP2 U B 890 42.427 114.318 77.753 1.00 22.42 O
ATOM 5 O5' U B 890 42.369 115.078 75.415 1.00 21.86 O
ATOM 6 C5' U B 890 41.924 115.919 74.329 1.00 21.18 C
ATOM 7 C4' U B 890 41.897 115.131 73.040 1.00 23.84 C
ATOM 8 O4' U B 890 43.240 114.681 72.727 1.00 26.38 O
ATOM 9 C3' U B 890 41.078 113.843 73.054 1.00 25.11 C
ATOM 10 O3' U B 890 39.696 114.095 72.823 1.00 24.10 O
ATOM 11 C2' U B 890 41.704 113.049 71.917 1.00 24.95 C
ATOM 12 O2' U B 890 41.275 113.472 70.649 1.00 26.98 O
ATOM 13 C1' U B 890 43.179 113.421 72.069 1.00 25.36 C
ATOM 14 N1 U B 890 43.896 112.419 72.867 1.00 22.98 N
ATOM 15 C2 U B 890 44.269 111.271 72.221 1.00 25.75 C
ATOM 16 O2 U B 890 44.081 111.097 71.029 1.00 29.79 O
ATOM 17 N3 U B 890 44.865 110.327 73.014 1.00 25.84 N
ATOM 18 C4 U B 890 45.121 110.421 74.361 1.00 25.57 C
ATOM 19 O4 U B 890 45.507 109.425 74.968 1.00 25.66 O
ATOM 20 C5 U B 890 44.745 111.663 74.948 1.00 24.36 C
ATOM 21 C6 U B 890 44.161 112.596 74.197 1.00 23.61 C
ATOM 22 P U B 891 38.581 113.281 73.648 1.00 25.67 P
ATOM 23 OP1 U B 891 38.952 113.226 75.080 1.00 25.41 O
ATOM 24 OP2 U B 891 38.286 112.024 72.930 1.00 26.12 O
ATOM 25 O5' U B 891 37.292 114.193 73.507 1.00 24.68 O
TER
Atoms:
C4: (39.045,116.547,68.215)
N3: (37.838,117.198,68.105)
OP1: (38.952,113.226,75.080)
OP2: (38.286,112.024,72.930)
C2: (36.887,117.340,69.080)
C1': (36.174,116.798,71.343)
C3': (34.960,115.575,72.949)
O5': (37.292,114.193,73.507)
O4': (36.820,117.025,72.577)
C5': (37.109,115.365,74.305)
P: (38.581,113.281,73.648)
C4': (36.134,116.286,73.623)
C2': (35.411,115.484,71.501)
O2': (34.320,115.394,70.610)
N1: (37.190,116.738,70.285)
O4: (39.779,116.473,67.232)
O2: (35.861,117.959,68.892)
C6: (38.388,116.089,70.472)
C5: (39.303,115.978,69.504)
O3': (33.790,116.356,73.027)
N3: (37.838,117.198,68.105)
OP1: (38.952,113.226,75.080)
OP2: (38.286,112.024,72.930)
C2: (36.887,117.340,69.080)
C1': (36.174,116.798,71.343)
C3': (34.960,115.575,72.949)
O5': (37.292,114.193,73.507)
O4': (36.820,117.025,72.577)
C5': (37.109,115.365,74.305)
P: (38.581,113.281,73.648)
C4': (36.134,116.286,73.623)
C2': (35.411,115.484,71.501)
O2': (34.320,115.394,70.610)
N1: (37.190,116.738,70.285)
O4: (39.779,116.473,67.232)
O2: (35.861,117.959,68.892)
C6: (38.388,116.089,70.472)
C5: (39.303,115.978,69.504)
O3': (33.790,116.356,73.027)
C4: (45.121,110.421,74.361)
N3: (44.865,110.327,73.014)
OP1: (40.899,116.257,77.092)
OP2: (42.427,114.318,77.753)
C2: (44.269,111.271,72.221)
C1': (43.179,113.421,72.069)
C3': (41.078,113.843,73.054)
O5': (42.369,115.078,75.415)
O4': (43.240,114.681,72.727)
C5': (41.924,115.919,74.329)
P: (42.177,115.512,76.938)
C4': (41.897,115.131,73.040)
C2': (41.704,113.049,71.917)
O2': (41.275,113.472,70.649)
N1: (43.896,112.419,72.867)
O4: (45.507,109.425,74.968)
O2: (44.081,111.097,71.029)
C6: (44.161,112.596,74.197)
C5: (44.745,111.663,74.948)
O3': (39.696,114.095,72.823)
N3: (44.865,110.327,73.014)
OP1: (40.899,116.257,77.092)
OP2: (42.427,114.318,77.753)
C2: (44.269,111.271,72.221)
C1': (43.179,113.421,72.069)
C3': (41.078,113.843,73.054)
O5': (42.369,115.078,75.415)
O4': (43.240,114.681,72.727)
C5': (41.924,115.919,74.329)
P: (42.177,115.512,76.938)
C4': (41.897,115.131,73.040)
C2': (41.704,113.049,71.917)
O2': (41.275,113.472,70.649)
N1: (43.896,112.419,72.867)
O4: (45.507,109.425,74.968)
O2: (44.081,111.097,71.029)
C6: (44.161,112.596,74.197)
C5: (44.745,111.663,74.948)
O3': (39.696,114.095,72.823)
Image (generated by PyMOL):