Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0891:0890
Extra
PDB:
ATOM 1 O3' U A 890 40.013 114.272 73.054 1.00 32.43 O
ATOM 2 P U A 891 38.867 113.485 73.863 1.00 32.71 P
ATOM 3 OP1 U A 891 39.236 113.407 75.289 1.00 35.09 O
ATOM 4 OP2 U A 891 38.549 112.250 73.140 1.00 35.60 O
ATOM 5 O5' U A 891 37.597 114.423 73.706 1.00 33.90 O
ATOM 6 C5' U A 891 37.366 115.546 74.568 1.00 32.88 C
ATOM 7 C4' U A 891 36.356 116.470 73.931 1.00 35.10 C
ATOM 8 O4' U A 891 36.989 117.209 72.855 1.00 36.23 O
ATOM 9 C3' U A 891 35.153 115.772 73.307 1.00 34.71 C
ATOM 10 O3' U A 891 34.018 116.595 73.393 1.00 35.50 O
ATOM 11 C2' U A 891 35.555 115.645 71.852 1.00 35.09 C
ATOM 12 O2' U A 891 34.429 115.547 71.013 1.00 34.72 O
ATOM 13 C1' U A 891 36.322 116.948 71.640 1.00 36.56 C
ATOM 14 N1 U A 891 37.342 116.866 70.586 1.00 38.83 N
ATOM 15 C2 U A 891 37.145 117.599 69.435 1.00 40.02 C
ATOM 16 O2 U A 891 36.188 118.321 69.263 1.00 41.30 O
ATOM 17 N3 U A 891 38.124 117.465 68.490 1.00 40.53 N
ATOM 18 C4 U A 891 39.262 116.704 68.582 1.00 41.07 C
ATOM 19 O4 U A 891 40.058 116.692 67.646 1.00 42.38 O
ATOM 20 C5 U A 891 39.401 115.986 69.808 1.00 42.08 C
ATOM 21 C6 U A 891 38.457 116.086 70.743 1.00 39.49 C
ATOM 22 P C A 892 32.887 116.256 74.468 1.00 38.53 P
ATOM 23 OP1 C A 892 31.760 117.187 74.240 1.00 37.42 O
ATOM 24 OP2 C A 892 33.537 116.210 75.790 1.00 39.46 O
ATOM 25 O5' C A 892 32.441 114.770 74.113 1.00 37.82 O
TER
ATOM 1 O3' G B 889 43.650 116.772 77.498 1.00 33.97 O
ATOM 2 P U B 890 42.422 115.764 77.239 1.00 32.57 P
ATOM 3 OP1 U B 890 41.198 116.581 77.280 1.00 32.88 O
ATOM 4 OP2 U B 890 42.537 114.596 78.121 1.00 29.56 O
ATOM 5 O5' U B 890 42.617 115.268 75.736 1.00 32.92 O
ATOM 6 C5' U B 890 42.224 116.095 74.615 1.00 32.05 C
ATOM 7 C4' U B 890 42.226 115.285 73.329 1.00 33.36 C
ATOM 8 O4' U B 890 43.576 114.834 73.029 1.00 32.57 O
ATOM 9 C3' U B 890 41.393 114.003 73.321 1.00 32.97 C
ATOM 10 O3' U B 890 40.013 114.272 73.054 1.00 32.43 O
ATOM 11 C2' U B 890 42.045 113.198 72.201 1.00 31.54 C
ATOM 12 O2' U B 890 41.637 113.599 70.909 1.00 32.74 O
ATOM 13 C1' U B 890 43.517 113.573 72.378 1.00 30.60 C
ATOM 14 N1 U B 890 44.233 112.582 73.186 1.00 27.75 N
ATOM 15 C2 U B 890 44.566 111.415 72.569 1.00 29.10 C
ATOM 16 O2 U B 890 44.342 111.206 71.391 1.00 32.81 O
ATOM 17 N3 U B 890 45.173 110.492 73.372 1.00 28.82 N
ATOM 18 C4 U B 890 45.477 110.626 74.700 1.00 28.03 C
ATOM 19 O4 U B 890 45.879 109.644 75.322 1.00 30.40 O
ATOM 20 C5 U B 890 45.139 111.888 75.259 1.00 25.35 C
ATOM 21 C6 U B 890 44.542 112.800 74.503 1.00 27.07 C
ATOM 22 P U B 891 38.867 113.485 73.863 1.00 32.71 P
ATOM 23 OP1 U B 891 39.236 113.407 75.289 1.00 35.09 O
ATOM 24 OP2 U B 891 38.549 112.250 73.140 1.00 35.60 O
ATOM 25 O5' U B 891 37.597 114.423 73.706 1.00 33.90 O
TER
ATOM 2 P U A 891 38.867 113.485 73.863 1.00 32.71 P
ATOM 3 OP1 U A 891 39.236 113.407 75.289 1.00 35.09 O
ATOM 4 OP2 U A 891 38.549 112.250 73.140 1.00 35.60 O
ATOM 5 O5' U A 891 37.597 114.423 73.706 1.00 33.90 O
ATOM 6 C5' U A 891 37.366 115.546 74.568 1.00 32.88 C
ATOM 7 C4' U A 891 36.356 116.470 73.931 1.00 35.10 C
ATOM 8 O4' U A 891 36.989 117.209 72.855 1.00 36.23 O
ATOM 9 C3' U A 891 35.153 115.772 73.307 1.00 34.71 C
ATOM 10 O3' U A 891 34.018 116.595 73.393 1.00 35.50 O
ATOM 11 C2' U A 891 35.555 115.645 71.852 1.00 35.09 C
ATOM 12 O2' U A 891 34.429 115.547 71.013 1.00 34.72 O
ATOM 13 C1' U A 891 36.322 116.948 71.640 1.00 36.56 C
ATOM 14 N1 U A 891 37.342 116.866 70.586 1.00 38.83 N
ATOM 15 C2 U A 891 37.145 117.599 69.435 1.00 40.02 C
ATOM 16 O2 U A 891 36.188 118.321 69.263 1.00 41.30 O
ATOM 17 N3 U A 891 38.124 117.465 68.490 1.00 40.53 N
ATOM 18 C4 U A 891 39.262 116.704 68.582 1.00 41.07 C
ATOM 19 O4 U A 891 40.058 116.692 67.646 1.00 42.38 O
ATOM 20 C5 U A 891 39.401 115.986 69.808 1.00 42.08 C
ATOM 21 C6 U A 891 38.457 116.086 70.743 1.00 39.49 C
ATOM 22 P C A 892 32.887 116.256 74.468 1.00 38.53 P
ATOM 23 OP1 C A 892 31.760 117.187 74.240 1.00 37.42 O
ATOM 24 OP2 C A 892 33.537 116.210 75.790 1.00 39.46 O
ATOM 25 O5' C A 892 32.441 114.770 74.113 1.00 37.82 O
TER
ATOM 1 O3' G B 889 43.650 116.772 77.498 1.00 33.97 O
ATOM 2 P U B 890 42.422 115.764 77.239 1.00 32.57 P
ATOM 3 OP1 U B 890 41.198 116.581 77.280 1.00 32.88 O
ATOM 4 OP2 U B 890 42.537 114.596 78.121 1.00 29.56 O
ATOM 5 O5' U B 890 42.617 115.268 75.736 1.00 32.92 O
ATOM 6 C5' U B 890 42.224 116.095 74.615 1.00 32.05 C
ATOM 7 C4' U B 890 42.226 115.285 73.329 1.00 33.36 C
ATOM 8 O4' U B 890 43.576 114.834 73.029 1.00 32.57 O
ATOM 9 C3' U B 890 41.393 114.003 73.321 1.00 32.97 C
ATOM 10 O3' U B 890 40.013 114.272 73.054 1.00 32.43 O
ATOM 11 C2' U B 890 42.045 113.198 72.201 1.00 31.54 C
ATOM 12 O2' U B 890 41.637 113.599 70.909 1.00 32.74 O
ATOM 13 C1' U B 890 43.517 113.573 72.378 1.00 30.60 C
ATOM 14 N1 U B 890 44.233 112.582 73.186 1.00 27.75 N
ATOM 15 C2 U B 890 44.566 111.415 72.569 1.00 29.10 C
ATOM 16 O2 U B 890 44.342 111.206 71.391 1.00 32.81 O
ATOM 17 N3 U B 890 45.173 110.492 73.372 1.00 28.82 N
ATOM 18 C4 U B 890 45.477 110.626 74.700 1.00 28.03 C
ATOM 19 O4 U B 890 45.879 109.644 75.322 1.00 30.40 O
ATOM 20 C5 U B 890 45.139 111.888 75.259 1.00 25.35 C
ATOM 21 C6 U B 890 44.542 112.800 74.503 1.00 27.07 C
ATOM 22 P U B 891 38.867 113.485 73.863 1.00 32.71 P
ATOM 23 OP1 U B 891 39.236 113.407 75.289 1.00 35.09 O
ATOM 24 OP2 U B 891 38.549 112.250 73.140 1.00 35.60 O
ATOM 25 O5' U B 891 37.597 114.423 73.706 1.00 33.90 O
TER
Atoms:
C4: (39.262,116.704,68.582)
N3: (38.124,117.465,68.490)
OP1: (39.236,113.407,75.289)
OP2: (38.549,112.250,73.140)
C2: (37.145,117.599,69.435)
C1': (36.322,116.948,71.640)
C3': (35.153,115.772,73.307)
O5': (37.597,114.423,73.706)
O4': (36.989,117.209,72.855)
C5': (37.366,115.546,74.568)
P: (38.867,113.485,73.863)
C4': (36.356,116.470,73.931)
C2': (35.555,115.645,71.852)
O2': (34.429,115.547,71.013)
N1: (37.342,116.866,70.586)
O4: (40.058,116.692,67.646)
O2: (36.188,118.321,69.263)
C6: (38.457,116.086,70.743)
C5: (39.401,115.986,69.808)
O3': (34.018,116.595,73.393)
N3: (38.124,117.465,68.490)
OP1: (39.236,113.407,75.289)
OP2: (38.549,112.250,73.140)
C2: (37.145,117.599,69.435)
C1': (36.322,116.948,71.640)
C3': (35.153,115.772,73.307)
O5': (37.597,114.423,73.706)
O4': (36.989,117.209,72.855)
C5': (37.366,115.546,74.568)
P: (38.867,113.485,73.863)
C4': (36.356,116.470,73.931)
C2': (35.555,115.645,71.852)
O2': (34.429,115.547,71.013)
N1: (37.342,116.866,70.586)
O4: (40.058,116.692,67.646)
O2: (36.188,118.321,69.263)
C6: (38.457,116.086,70.743)
C5: (39.401,115.986,69.808)
O3': (34.018,116.595,73.393)
C4: (45.477,110.626,74.700)
N3: (45.173,110.492,73.372)
OP1: (41.198,116.581,77.280)
OP2: (42.537,114.596,78.121)
C2: (44.566,111.415,72.569)
C1': (43.517,113.573,72.378)
C3': (41.393,114.003,73.321)
O5': (42.617,115.268,75.736)
O4': (43.576,114.834,73.029)
C5': (42.224,116.095,74.615)
P: (42.422,115.764,77.239)
C4': (42.226,115.285,73.329)
C2': (42.045,113.198,72.201)
O2': (41.637,113.599,70.909)
N1: (44.233,112.582,73.186)
O4: (45.879,109.644,75.322)
O2: (44.342,111.206,71.391)
C6: (44.542,112.800,74.503)
C5: (45.139,111.888,75.259)
O3': (40.013,114.272,73.054)
N3: (45.173,110.492,73.372)
OP1: (41.198,116.581,77.280)
OP2: (42.537,114.596,78.121)
C2: (44.566,111.415,72.569)
C1': (43.517,113.573,72.378)
C3': (41.393,114.003,73.321)
O5': (42.617,115.268,75.736)
O4': (43.576,114.834,73.029)
C5': (42.224,116.095,74.615)
P: (42.422,115.764,77.239)
C4': (42.226,115.285,73.329)
C2': (42.045,113.198,72.201)
O2': (41.637,113.599,70.909)
N1: (44.233,112.582,73.186)
O4: (45.879,109.644,75.322)
O2: (44.342,111.206,71.391)
C6: (44.542,112.800,74.503)
C5: (45.139,111.888,75.259)
O3': (40.013,114.272,73.054)
Image (generated by PyMOL):