Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02355:02353
Extra
PDB:
ATOM 1 O3' A A2354 69.775 107.765 151.455 1.00 69.83 O
ATOM 2 P U A2355 69.575 107.286 149.940 1.00 68.33 P
ATOM 3 OP1 U A2355 68.814 108.343 149.231 1.00 69.10 O
ATOM 4 OP2 U A2355 69.052 105.899 149.978 1.00 68.27 O
ATOM 5 O5' U A2355 71.048 107.247 149.340 1.00 66.67 O
ATOM 6 C5' U A2355 71.874 108.422 149.325 1.00 64.72 C
ATOM 7 C4' U A2355 73.305 108.042 149.036 1.00 63.65 C
ATOM 8 O4' U A2355 73.820 107.222 150.114 1.00 62.14 O
ATOM 9 C3' U A2355 73.499 107.171 147.810 1.00 64.52 C
ATOM 10 O3' U A2355 73.493 107.932 146.614 1.00 67.46 O
ATOM 11 C2' U A2355 74.839 106.513 148.094 1.00 62.95 C
ATOM 12 O2' U A2355 75.941 107.367 147.874 1.00 64.35 O
ATOM 13 C1' U A2355 74.713 106.252 149.591 1.00 61.10 C
ATOM 14 N1 U A2355 74.175 104.916 149.871 1.00 59.57 N
ATOM 15 C2 U A2355 75.045 103.850 149.776 1.00 60.43 C
ATOM 16 O2 U A2355 76.216 103.977 149.447 1.00 61.20 O
ATOM 17 N3 U A2355 74.495 102.627 150.069 1.00 60.31 N
ATOM 18 C4 U A2355 73.191 102.366 150.428 1.00 60.12 C
ATOM 19 O4 U A2355 72.854 101.211 150.688 1.00 59.20 O
ATOM 20 C5 U A2355 72.351 103.518 150.486 1.00 60.04 C
ATOM 21 C6 U A2355 72.859 104.723 150.215 1.00 59.90 C
ATOM 22 P C A2356 72.955 107.267 145.257 1.00 67.28 P
ATOM 23 OP1 C A2356 72.970 108.357 144.253 1.00 67.76 O
ATOM 24 OP2 C A2356 71.691 106.533 145.532 1.00 66.53 O
ATOM 25 O5' C A2356 74.084 106.205 144.889 1.00 66.83 O
TER
ATOM 1 O3' A B2352 72.225 97.147 153.446 1.00 95.89 O
ATOM 2 P U B2353 71.217 97.921 154.431 1.00 92.80 P
ATOM 3 OP1 U B2353 72.017 98.803 155.307 1.00 91.65 O
ATOM 4 OP2 U B2353 70.323 96.906 155.033 1.00 92.75 O
ATOM 5 O5' U B2353 70.339 98.835 153.466 1.00 93.29 O
ATOM 6 C5' U B2353 70.964 99.730 152.524 1.00 94.58 C
ATOM 7 C4' U B2353 69.956 100.218 151.502 1.00 94.85 C
ATOM 8 O4' U B2353 69.391 99.091 150.786 1.00 96.26 O
ATOM 9 C3' U B2353 68.752 100.971 152.047 1.00 93.63 C
ATOM 10 O3' U B2353 69.089 102.342 152.197 1.00 90.24 O
ATOM 11 C2' U B2353 67.721 100.787 150.940 1.00 95.18 C
ATOM 12 O2' U B2353 67.918 101.686 149.865 1.00 94.35 O
ATOM 13 C1' U B2353 68.036 99.365 150.463 1.00 97.29 C
ATOM 14 N1 U B2353 67.188 98.301 151.032 1.00 99.57 N
ATOM 15 C2 U B2353 65.894 98.162 150.537 1.00100.80 C
ATOM 16 O2 U B2353 65.419 98.895 149.676 1.00101.30 O
ATOM 17 N3 U B2353 65.174 97.128 151.087 1.00101.57 N
ATOM 18 C4 U B2353 65.596 96.239 152.055 1.00101.07 C
ATOM 19 O4 U B2353 64.841 95.333 152.415 1.00102.15 O
ATOM 20 C5 U B2353 66.930 96.455 152.522 1.00100.30 C
ATOM 21 C6 U B2353 67.660 97.452 152.014 1.00 99.55 C
ATOM 22 P A B2354 68.534 103.181 153.445 1.00 86.76 P
ATOM 23 OP1 A B2354 68.911 102.459 154.687 1.00 86.54 O
ATOM 24 OP2 A B2354 67.108 103.507 153.190 1.00 86.66 O
ATOM 25 O5' A B2354 69.402 104.514 153.367 1.00 83.25 O
TER
ATOM 2 P U A2355 69.575 107.286 149.940 1.00 68.33 P
ATOM 3 OP1 U A2355 68.814 108.343 149.231 1.00 69.10 O
ATOM 4 OP2 U A2355 69.052 105.899 149.978 1.00 68.27 O
ATOM 5 O5' U A2355 71.048 107.247 149.340 1.00 66.67 O
ATOM 6 C5' U A2355 71.874 108.422 149.325 1.00 64.72 C
ATOM 7 C4' U A2355 73.305 108.042 149.036 1.00 63.65 C
ATOM 8 O4' U A2355 73.820 107.222 150.114 1.00 62.14 O
ATOM 9 C3' U A2355 73.499 107.171 147.810 1.00 64.52 C
ATOM 10 O3' U A2355 73.493 107.932 146.614 1.00 67.46 O
ATOM 11 C2' U A2355 74.839 106.513 148.094 1.00 62.95 C
ATOM 12 O2' U A2355 75.941 107.367 147.874 1.00 64.35 O
ATOM 13 C1' U A2355 74.713 106.252 149.591 1.00 61.10 C
ATOM 14 N1 U A2355 74.175 104.916 149.871 1.00 59.57 N
ATOM 15 C2 U A2355 75.045 103.850 149.776 1.00 60.43 C
ATOM 16 O2 U A2355 76.216 103.977 149.447 1.00 61.20 O
ATOM 17 N3 U A2355 74.495 102.627 150.069 1.00 60.31 N
ATOM 18 C4 U A2355 73.191 102.366 150.428 1.00 60.12 C
ATOM 19 O4 U A2355 72.854 101.211 150.688 1.00 59.20 O
ATOM 20 C5 U A2355 72.351 103.518 150.486 1.00 60.04 C
ATOM 21 C6 U A2355 72.859 104.723 150.215 1.00 59.90 C
ATOM 22 P C A2356 72.955 107.267 145.257 1.00 67.28 P
ATOM 23 OP1 C A2356 72.970 108.357 144.253 1.00 67.76 O
ATOM 24 OP2 C A2356 71.691 106.533 145.532 1.00 66.53 O
ATOM 25 O5' C A2356 74.084 106.205 144.889 1.00 66.83 O
TER
ATOM 1 O3' A B2352 72.225 97.147 153.446 1.00 95.89 O
ATOM 2 P U B2353 71.217 97.921 154.431 1.00 92.80 P
ATOM 3 OP1 U B2353 72.017 98.803 155.307 1.00 91.65 O
ATOM 4 OP2 U B2353 70.323 96.906 155.033 1.00 92.75 O
ATOM 5 O5' U B2353 70.339 98.835 153.466 1.00 93.29 O
ATOM 6 C5' U B2353 70.964 99.730 152.524 1.00 94.58 C
ATOM 7 C4' U B2353 69.956 100.218 151.502 1.00 94.85 C
ATOM 8 O4' U B2353 69.391 99.091 150.786 1.00 96.26 O
ATOM 9 C3' U B2353 68.752 100.971 152.047 1.00 93.63 C
ATOM 10 O3' U B2353 69.089 102.342 152.197 1.00 90.24 O
ATOM 11 C2' U B2353 67.721 100.787 150.940 1.00 95.18 C
ATOM 12 O2' U B2353 67.918 101.686 149.865 1.00 94.35 O
ATOM 13 C1' U B2353 68.036 99.365 150.463 1.00 97.29 C
ATOM 14 N1 U B2353 67.188 98.301 151.032 1.00 99.57 N
ATOM 15 C2 U B2353 65.894 98.162 150.537 1.00100.80 C
ATOM 16 O2 U B2353 65.419 98.895 149.676 1.00101.30 O
ATOM 17 N3 U B2353 65.174 97.128 151.087 1.00101.57 N
ATOM 18 C4 U B2353 65.596 96.239 152.055 1.00101.07 C
ATOM 19 O4 U B2353 64.841 95.333 152.415 1.00102.15 O
ATOM 20 C5 U B2353 66.930 96.455 152.522 1.00100.30 C
ATOM 21 C6 U B2353 67.660 97.452 152.014 1.00 99.55 C
ATOM 22 P A B2354 68.534 103.181 153.445 1.00 86.76 P
ATOM 23 OP1 A B2354 68.911 102.459 154.687 1.00 86.54 O
ATOM 24 OP2 A B2354 67.108 103.507 153.190 1.00 86.66 O
ATOM 25 O5' A B2354 69.402 104.514 153.367 1.00 83.25 O
TER
Atoms:
C4: (73.191,102.366,150.428)
N3: (74.495,102.627,150.069)
OP1: (68.814,108.343,149.231)
OP2: (69.052,105.899,149.978)
C2: (75.045,103.850,149.776)
C1': (74.713,106.252,149.591)
C3': (73.499,107.171,147.810)
O5': (71.048,107.247,149.340)
O4': (73.820,107.222,150.114)
C5': (71.874,108.422,149.325)
P: (69.575,107.286,149.940)
C4': (73.305,108.042,149.036)
C2': (74.839,106.513,148.094)
O2': (75.941,107.367,147.874)
N1: (74.175,104.916,149.871)
O4: (72.854,101.211,150.688)
O2: (76.216,103.977,149.447)
C6: (72.859,104.723,150.215)
C5: (72.351,103.518,150.486)
O3': (73.493,107.932,146.614)
N3: (74.495,102.627,150.069)
OP1: (68.814,108.343,149.231)
OP2: (69.052,105.899,149.978)
C2: (75.045,103.850,149.776)
C1': (74.713,106.252,149.591)
C3': (73.499,107.171,147.810)
O5': (71.048,107.247,149.340)
O4': (73.820,107.222,150.114)
C5': (71.874,108.422,149.325)
P: (69.575,107.286,149.940)
C4': (73.305,108.042,149.036)
C2': (74.839,106.513,148.094)
O2': (75.941,107.367,147.874)
N1: (74.175,104.916,149.871)
O4: (72.854,101.211,150.688)
O2: (76.216,103.977,149.447)
C6: (72.859,104.723,150.215)
C5: (72.351,103.518,150.486)
O3': (73.493,107.932,146.614)
C4: (65.596,96.239,152.055)
N3: (65.174,97.128,151.087)
OP1: (72.017,98.803,155.307)
OP2: (70.323,96.906,155.033)
C2: (65.894,98.162,150.537)
C1': (68.036,99.365,150.463)
C3': (68.752,100.971,152.047)
O5': (70.339,98.835,153.466)
O4': (69.391,99.091,150.786)
C5': (70.964,99.730,152.524)
P: (71.217,97.921,154.431)
C4': (69.956,100.218,151.502)
C2': (67.721,100.787,150.940)
O2': (67.918,101.686,149.865)
N1: (67.188,98.301,151.032)
O4: (64.841,95.333,152.415)
O2: (65.419,98.895,149.676)
C6: (67.660,97.452,152.014)
C5: (66.930,96.455,152.522)
O3': (69.089,102.342,152.197)
N3: (65.174,97.128,151.087)
OP1: (72.017,98.803,155.307)
OP2: (70.323,96.906,155.033)
C2: (65.894,98.162,150.537)
C1': (68.036,99.365,150.463)
C3': (68.752,100.971,152.047)
O5': (70.339,98.835,153.466)
O4': (69.391,99.091,150.786)
C5': (70.964,99.730,152.524)
P: (71.217,97.921,154.431)
C4': (69.956,100.218,151.502)
C2': (67.721,100.787,150.940)
O2': (67.918,101.686,149.865)
N1: (67.188,98.301,151.032)
O4: (64.841,95.333,152.415)
O2: (65.419,98.895,149.676)
C6: (67.660,97.452,152.014)
C5: (66.930,96.455,152.522)
O3': (69.089,102.342,152.197)
Image (generated by PyMOL):