Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0891:0890
Extra
PDB:
ATOM 1 O3' U A 890 39.762 114.033 72.749 1.00 29.54 O
ATOM 2 P U A 891 38.635 113.254 73.581 1.00 31.28 P
ATOM 3 OP1 U A 891 39.013 113.192 75.009 1.00 31.70 O
ATOM 4 OP2 U A 891 38.359 112.004 72.855 1.00 34.77 O
ATOM 5 O5' U A 891 37.360 114.192 73.448 1.00 29.50 O
ATOM 6 C5' U A 891 37.222 115.381 74.244 1.00 28.79 C
ATOM 7 C4' U A 891 36.222 116.316 73.603 1.00 30.40 C
ATOM 8 O4' U A 891 36.867 117.079 72.548 1.00 29.58 O
ATOM 9 C3' U A 891 35.023 115.621 72.960 1.00 30.22 C
ATOM 10 O3' U A 891 33.859 116.424 73.054 1.00 30.33 O
ATOM 11 C2' U A 891 35.453 115.521 71.506 1.00 29.31 C
ATOM 12 O2' U A 891 34.361 115.399 70.630 1.00 28.06 O
ATOM 13 C1' U A 891 36.201 116.841 71.326 1.00 30.35 C
ATOM 14 N1 U A 891 37.205 116.783 70.258 1.00 32.50 N
ATOM 15 C2 U A 891 36.871 117.332 69.045 1.00 33.84 C
ATOM 16 O2 U A 891 35.823 117.912 68.852 1.00 34.87 O
ATOM 17 N3 U A 891 37.817 117.191 68.065 1.00 34.99 N
ATOM 18 C4 U A 891 39.048 116.587 68.184 1.00 36.28 C
ATOM 19 O4 U A 891 39.777 116.491 67.192 1.00 38.44 O
ATOM 20 C5 U A 891 39.334 116.076 69.488 1.00 36.33 C
ATOM 21 C6 U A 891 38.425 116.188 70.455 1.00 34.22 C
ATOM 22 P C A 892 32.724 116.046 74.118 1.00 32.88 P
ATOM 23 OP1 C A 892 31.585 116.969 73.921 1.00 33.61 O
ATOM 24 OP2 C A 892 33.366 115.962 75.448 1.00 30.83 O
ATOM 25 O5' C A 892 32.271 114.574 73.701 1.00 33.29 O
TER
ATOM 1 O3' G B 889 43.469 116.546 77.132 1.00 30.64 O
ATOM 2 P U B 890 42.313 115.460 76.886 1.00 29.28 P
ATOM 3 OP1 U B 890 41.017 116.157 77.072 1.00 27.64 O
ATOM 4 OP2 U B 890 42.613 114.257 77.682 1.00 25.86 O
ATOM 5 O5' U B 890 42.499 115.048 75.358 1.00 27.79 O
ATOM 6 C5' U B 890 41.968 115.854 74.291 1.00 26.28 C
ATOM 7 C4' U B 890 41.950 115.060 73.004 1.00 28.29 C
ATOM 8 O4' U B 890 43.294 114.609 72.711 1.00 28.49 O
ATOM 9 C3' U B 890 41.135 113.774 73.003 1.00 28.60 C
ATOM 10 O3' U B 890 39.762 114.033 72.749 1.00 29.54 O
ATOM 11 C2' U B 890 41.776 112.984 71.870 1.00 28.38 C
ATOM 12 O2' U B 890 41.367 113.381 70.581 1.00 31.56 O
ATOM 13 C1' U B 890 43.243 113.364 72.039 1.00 26.34 C
ATOM 14 N1 U B 890 43.966 112.365 72.827 1.00 24.16 N
ATOM 15 C2 U B 890 44.373 111.241 72.166 1.00 25.42 C
ATOM 16 O2 U B 890 44.191 111.078 70.980 1.00 26.98 O
ATOM 17 N3 U B 890 44.996 110.307 72.944 1.00 26.78 N
ATOM 18 C4 U B 890 45.241 110.384 74.290 1.00 25.83 C
ATOM 19 O4 U B 890 45.643 109.382 74.879 1.00 27.23 O
ATOM 20 C5 U B 890 44.821 111.602 74.899 1.00 24.00 C
ATOM 21 C6 U B 890 44.212 112.528 74.165 1.00 23.82 C
ATOM 22 P U B 891 38.635 113.254 73.581 1.00 31.28 P
ATOM 23 OP1 U B 891 39.013 113.192 75.009 1.00 31.70 O
ATOM 24 OP2 U B 891 38.359 112.004 72.855 1.00 34.77 O
ATOM 25 O5' U B 891 37.360 114.192 73.448 1.00 29.50 O
TER
ATOM 2 P U A 891 38.635 113.254 73.581 1.00 31.28 P
ATOM 3 OP1 U A 891 39.013 113.192 75.009 1.00 31.70 O
ATOM 4 OP2 U A 891 38.359 112.004 72.855 1.00 34.77 O
ATOM 5 O5' U A 891 37.360 114.192 73.448 1.00 29.50 O
ATOM 6 C5' U A 891 37.222 115.381 74.244 1.00 28.79 C
ATOM 7 C4' U A 891 36.222 116.316 73.603 1.00 30.40 C
ATOM 8 O4' U A 891 36.867 117.079 72.548 1.00 29.58 O
ATOM 9 C3' U A 891 35.023 115.621 72.960 1.00 30.22 C
ATOM 10 O3' U A 891 33.859 116.424 73.054 1.00 30.33 O
ATOM 11 C2' U A 891 35.453 115.521 71.506 1.00 29.31 C
ATOM 12 O2' U A 891 34.361 115.399 70.630 1.00 28.06 O
ATOM 13 C1' U A 891 36.201 116.841 71.326 1.00 30.35 C
ATOM 14 N1 U A 891 37.205 116.783 70.258 1.00 32.50 N
ATOM 15 C2 U A 891 36.871 117.332 69.045 1.00 33.84 C
ATOM 16 O2 U A 891 35.823 117.912 68.852 1.00 34.87 O
ATOM 17 N3 U A 891 37.817 117.191 68.065 1.00 34.99 N
ATOM 18 C4 U A 891 39.048 116.587 68.184 1.00 36.28 C
ATOM 19 O4 U A 891 39.777 116.491 67.192 1.00 38.44 O
ATOM 20 C5 U A 891 39.334 116.076 69.488 1.00 36.33 C
ATOM 21 C6 U A 891 38.425 116.188 70.455 1.00 34.22 C
ATOM 22 P C A 892 32.724 116.046 74.118 1.00 32.88 P
ATOM 23 OP1 C A 892 31.585 116.969 73.921 1.00 33.61 O
ATOM 24 OP2 C A 892 33.366 115.962 75.448 1.00 30.83 O
ATOM 25 O5' C A 892 32.271 114.574 73.701 1.00 33.29 O
TER
ATOM 1 O3' G B 889 43.469 116.546 77.132 1.00 30.64 O
ATOM 2 P U B 890 42.313 115.460 76.886 1.00 29.28 P
ATOM 3 OP1 U B 890 41.017 116.157 77.072 1.00 27.64 O
ATOM 4 OP2 U B 890 42.613 114.257 77.682 1.00 25.86 O
ATOM 5 O5' U B 890 42.499 115.048 75.358 1.00 27.79 O
ATOM 6 C5' U B 890 41.968 115.854 74.291 1.00 26.28 C
ATOM 7 C4' U B 890 41.950 115.060 73.004 1.00 28.29 C
ATOM 8 O4' U B 890 43.294 114.609 72.711 1.00 28.49 O
ATOM 9 C3' U B 890 41.135 113.774 73.003 1.00 28.60 C
ATOM 10 O3' U B 890 39.762 114.033 72.749 1.00 29.54 O
ATOM 11 C2' U B 890 41.776 112.984 71.870 1.00 28.38 C
ATOM 12 O2' U B 890 41.367 113.381 70.581 1.00 31.56 O
ATOM 13 C1' U B 890 43.243 113.364 72.039 1.00 26.34 C
ATOM 14 N1 U B 890 43.966 112.365 72.827 1.00 24.16 N
ATOM 15 C2 U B 890 44.373 111.241 72.166 1.00 25.42 C
ATOM 16 O2 U B 890 44.191 111.078 70.980 1.00 26.98 O
ATOM 17 N3 U B 890 44.996 110.307 72.944 1.00 26.78 N
ATOM 18 C4 U B 890 45.241 110.384 74.290 1.00 25.83 C
ATOM 19 O4 U B 890 45.643 109.382 74.879 1.00 27.23 O
ATOM 20 C5 U B 890 44.821 111.602 74.899 1.00 24.00 C
ATOM 21 C6 U B 890 44.212 112.528 74.165 1.00 23.82 C
ATOM 22 P U B 891 38.635 113.254 73.581 1.00 31.28 P
ATOM 23 OP1 U B 891 39.013 113.192 75.009 1.00 31.70 O
ATOM 24 OP2 U B 891 38.359 112.004 72.855 1.00 34.77 O
ATOM 25 O5' U B 891 37.360 114.192 73.448 1.00 29.50 O
TER
Atoms:
C4: (39.048,116.587,68.184)
N3: (37.817,117.191,68.065)
OP1: (39.013,113.192,75.009)
OP2: (38.359,112.004,72.855)
C2: (36.871,117.332,69.045)
C1': (36.201,116.841,71.326)
C3': (35.023,115.621,72.960)
O5': (37.360,114.192,73.448)
O4': (36.867,117.079,72.548)
C5': (37.222,115.381,74.244)
P: (38.635,113.254,73.581)
C4': (36.222,116.316,73.603)
C2': (35.453,115.521,71.506)
O2': (34.361,115.399,70.630)
N1: (37.205,116.783,70.258)
O4: (39.777,116.491,67.192)
O2: (35.823,117.912,68.852)
C6: (38.425,116.188,70.455)
C5: (39.334,116.076,69.488)
O3': (33.859,116.424,73.054)
N3: (37.817,117.191,68.065)
OP1: (39.013,113.192,75.009)
OP2: (38.359,112.004,72.855)
C2: (36.871,117.332,69.045)
C1': (36.201,116.841,71.326)
C3': (35.023,115.621,72.960)
O5': (37.360,114.192,73.448)
O4': (36.867,117.079,72.548)
C5': (37.222,115.381,74.244)
P: (38.635,113.254,73.581)
C4': (36.222,116.316,73.603)
C2': (35.453,115.521,71.506)
O2': (34.361,115.399,70.630)
N1: (37.205,116.783,70.258)
O4: (39.777,116.491,67.192)
O2: (35.823,117.912,68.852)
C6: (38.425,116.188,70.455)
C5: (39.334,116.076,69.488)
O3': (33.859,116.424,73.054)
C4: (45.241,110.384,74.290)
N3: (44.996,110.307,72.944)
OP1: (41.017,116.157,77.072)
OP2: (42.613,114.257,77.682)
C2: (44.373,111.241,72.166)
C1': (43.243,113.364,72.039)
C3': (41.135,113.774,73.003)
O5': (42.499,115.048,75.358)
O4': (43.294,114.609,72.711)
C5': (41.968,115.854,74.291)
P: (42.313,115.460,76.886)
C4': (41.950,115.060,73.004)
C2': (41.776,112.984,71.870)
O2': (41.367,113.381,70.581)
N1: (43.966,112.365,72.827)
O4: (45.643,109.382,74.879)
O2: (44.191,111.078,70.980)
C6: (44.212,112.528,74.165)
C5: (44.821,111.602,74.899)
O3': (39.762,114.033,72.749)
N3: (44.996,110.307,72.944)
OP1: (41.017,116.157,77.072)
OP2: (42.613,114.257,77.682)
C2: (44.373,111.241,72.166)
C1': (43.243,113.364,72.039)
C3': (41.135,113.774,73.003)
O5': (42.499,115.048,75.358)
O4': (43.294,114.609,72.711)
C5': (41.968,115.854,74.291)
P: (42.313,115.460,76.886)
C4': (41.950,115.060,73.004)
C2': (41.776,112.984,71.870)
O2': (41.367,113.381,70.581)
N1: (43.966,112.365,72.827)
O4: (45.643,109.382,74.879)
O2: (44.191,111.078,70.980)
C6: (44.212,112.528,74.165)
C5: (44.821,111.602,74.899)
O3': (39.762,114.033,72.749)
Image (generated by PyMOL):