Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1ZBH:E8:E6
Extra
PDB:
ATOM 1 O3' U A 7 -0.024 -14.621 24.307 1.00 50.42 O
ATOM 2 P U A 8 -0.540 -14.340 22.817 1.00 50.36 P
ATOM 3 OP1 U A 8 0.581 -13.715 22.078 1.00 50.32 O
ATOM 4 OP2 U A 8 -1.847 -13.645 22.875 1.00 50.37 O
ATOM 5 O5' U A 8 -0.806 -15.816 22.255 1.00 50.37 O
ATOM 6 C5' U A 8 0.270 -16.713 21.981 1.00 50.31 C
ATOM 7 C4' U A 8 -0.243 -18.050 21.467 1.00 50.26 C
ATOM 8 O4' U A 8 -1.259 -18.564 22.367 1.00 50.30 O
ATOM 9 C3' U A 8 -0.868 -18.023 20.071 1.00 50.21 C
ATOM 10 O3' U A 8 -0.246 -19.019 19.254 1.00 50.17 O
ATOM 11 C2' U A 8 -2.356 -18.299 20.315 1.00 50.18 C
ATOM 12 O2' U A 8 -2.964 -19.056 19.284 1.00 49.97 O
ATOM 13 C1' U A 8 -2.330 -19.097 21.618 1.00 50.20 C
ATOM 14 N1 U A 8 -3.592 -19.026 22.440 1.00 50.18 N
ATOM 15 C2 U A 8 -4.463 -20.106 22.448 1.00 50.16 C
ATOM 16 O2 U A 8 -4.280 -21.134 21.819 1.00 50.18 O
ATOM 17 N3 U A 8 -5.583 -19.943 23.232 1.00 50.13 N
ATOM 18 C4 U A 8 -5.915 -18.835 23.994 1.00 50.12 C
ATOM 19 O4 U A 8 -6.953 -18.837 24.645 1.00 50.09 O
ATOM 20 C5 U A 8 -4.964 -17.751 23.941 1.00 50.15 C
ATOM 21 C6 U A 8 -3.864 -17.886 23.184 1.00 50.19 C
ATOM 22 P C A 9 1.005 -18.682 18.304 1.00 50.13 P
ATOM 23 OP1 C A 9 1.648 -17.423 18.754 1.00 50.23 O
ATOM 24 OP2 C A 9 0.536 -18.789 16.902 1.00 50.03 O
ATOM 25 O5' C A 9 1.991 -19.918 18.581 1.00 49.92 O
TER
ATOM 1 O3' U B 5 -8.815 -16.726 27.620 1.00 49.74 O
ATOM 2 P U B 6 -9.582 -16.268 26.286 1.00 49.80 P
ATOM 3 OP1 U B 6 -10.977 -15.944 26.661 1.00 49.81 O
ATOM 4 OP2 U B 6 -9.324 -17.258 25.213 1.00 49.73 O
ATOM 5 O5' U B 6 -8.831 -14.905 25.915 1.00 49.77 O
ATOM 6 C5' U B 6 -8.724 -14.477 24.565 1.00 49.73 C
ATOM 7 C4' U B 6 -7.318 -14.701 24.034 1.00 49.81 C
ATOM 8 O4' U B 6 -7.286 -14.350 22.625 1.00 49.76 O
ATOM 9 C3' U B 6 -6.232 -13.854 24.693 1.00 49.90 C
ATOM 10 O3' U B 6 -5.559 -14.590 25.719 1.00 50.17 O
ATOM 11 C2' U B 6 -5.305 -13.522 23.526 1.00 49.78 C
ATOM 12 O2' U B 6 -4.397 -14.565 23.220 1.00 49.67 O
ATOM 13 C1' U B 6 -6.311 -13.348 22.389 1.00 49.74 C
ATOM 14 N1 U B 6 -6.979 -11.978 22.280 1.00 49.74 N
ATOM 15 C2 U B 6 -6.235 -10.800 22.343 1.00 49.73 C
ATOM 16 O2 U B 6 -5.025 -10.748 22.491 1.00 49.73 O
ATOM 17 N3 U B 6 -6.970 -9.639 22.228 1.00 49.69 N
ATOM 18 C4 U B 6 -8.340 -9.523 22.056 1.00 49.68 C
ATOM 19 O4 U B 6 -8.851 -8.411 21.968 1.00 49.68 O
ATOM 20 C5 U B 6 -9.049 -10.777 21.996 1.00 49.68 C
ATOM 21 C6 U B 6 -8.357 -11.921 22.103 1.00 49.71 C
ATOM 22 P U B 7 -4.916 -13.855 26.994 1.00 50.37 P
ATOM 23 OP1 U B 7 -5.220 -14.689 28.177 1.00 50.24 O
ATOM 24 OP2 U B 7 -5.316 -12.427 26.985 1.00 50.34 O
ATOM 25 O5' U B 7 -3.341 -13.987 26.729 1.00 50.47 O
TER
ATOM 2 P U A 8 -0.540 -14.340 22.817 1.00 50.36 P
ATOM 3 OP1 U A 8 0.581 -13.715 22.078 1.00 50.32 O
ATOM 4 OP2 U A 8 -1.847 -13.645 22.875 1.00 50.37 O
ATOM 5 O5' U A 8 -0.806 -15.816 22.255 1.00 50.37 O
ATOM 6 C5' U A 8 0.270 -16.713 21.981 1.00 50.31 C
ATOM 7 C4' U A 8 -0.243 -18.050 21.467 1.00 50.26 C
ATOM 8 O4' U A 8 -1.259 -18.564 22.367 1.00 50.30 O
ATOM 9 C3' U A 8 -0.868 -18.023 20.071 1.00 50.21 C
ATOM 10 O3' U A 8 -0.246 -19.019 19.254 1.00 50.17 O
ATOM 11 C2' U A 8 -2.356 -18.299 20.315 1.00 50.18 C
ATOM 12 O2' U A 8 -2.964 -19.056 19.284 1.00 49.97 O
ATOM 13 C1' U A 8 -2.330 -19.097 21.618 1.00 50.20 C
ATOM 14 N1 U A 8 -3.592 -19.026 22.440 1.00 50.18 N
ATOM 15 C2 U A 8 -4.463 -20.106 22.448 1.00 50.16 C
ATOM 16 O2 U A 8 -4.280 -21.134 21.819 1.00 50.18 O
ATOM 17 N3 U A 8 -5.583 -19.943 23.232 1.00 50.13 N
ATOM 18 C4 U A 8 -5.915 -18.835 23.994 1.00 50.12 C
ATOM 19 O4 U A 8 -6.953 -18.837 24.645 1.00 50.09 O
ATOM 20 C5 U A 8 -4.964 -17.751 23.941 1.00 50.15 C
ATOM 21 C6 U A 8 -3.864 -17.886 23.184 1.00 50.19 C
ATOM 22 P C A 9 1.005 -18.682 18.304 1.00 50.13 P
ATOM 23 OP1 C A 9 1.648 -17.423 18.754 1.00 50.23 O
ATOM 24 OP2 C A 9 0.536 -18.789 16.902 1.00 50.03 O
ATOM 25 O5' C A 9 1.991 -19.918 18.581 1.00 49.92 O
TER
ATOM 1 O3' U B 5 -8.815 -16.726 27.620 1.00 49.74 O
ATOM 2 P U B 6 -9.582 -16.268 26.286 1.00 49.80 P
ATOM 3 OP1 U B 6 -10.977 -15.944 26.661 1.00 49.81 O
ATOM 4 OP2 U B 6 -9.324 -17.258 25.213 1.00 49.73 O
ATOM 5 O5' U B 6 -8.831 -14.905 25.915 1.00 49.77 O
ATOM 6 C5' U B 6 -8.724 -14.477 24.565 1.00 49.73 C
ATOM 7 C4' U B 6 -7.318 -14.701 24.034 1.00 49.81 C
ATOM 8 O4' U B 6 -7.286 -14.350 22.625 1.00 49.76 O
ATOM 9 C3' U B 6 -6.232 -13.854 24.693 1.00 49.90 C
ATOM 10 O3' U B 6 -5.559 -14.590 25.719 1.00 50.17 O
ATOM 11 C2' U B 6 -5.305 -13.522 23.526 1.00 49.78 C
ATOM 12 O2' U B 6 -4.397 -14.565 23.220 1.00 49.67 O
ATOM 13 C1' U B 6 -6.311 -13.348 22.389 1.00 49.74 C
ATOM 14 N1 U B 6 -6.979 -11.978 22.280 1.00 49.74 N
ATOM 15 C2 U B 6 -6.235 -10.800 22.343 1.00 49.73 C
ATOM 16 O2 U B 6 -5.025 -10.748 22.491 1.00 49.73 O
ATOM 17 N3 U B 6 -6.970 -9.639 22.228 1.00 49.69 N
ATOM 18 C4 U B 6 -8.340 -9.523 22.056 1.00 49.68 C
ATOM 19 O4 U B 6 -8.851 -8.411 21.968 1.00 49.68 O
ATOM 20 C5 U B 6 -9.049 -10.777 21.996 1.00 49.68 C
ATOM 21 C6 U B 6 -8.357 -11.921 22.103 1.00 49.71 C
ATOM 22 P U B 7 -4.916 -13.855 26.994 1.00 50.37 P
ATOM 23 OP1 U B 7 -5.220 -14.689 28.177 1.00 50.24 O
ATOM 24 OP2 U B 7 -5.316 -12.427 26.985 1.00 50.34 O
ATOM 25 O5' U B 7 -3.341 -13.987 26.729 1.00 50.47 O
TER
Atoms:
C4: (-5.915,-18.835,23.994)
N3: (-5.583,-19.943,23.232)
OP1: (0.581,-13.715,22.078)
OP2: (-1.847,-13.645,22.875)
C2: (-4.463,-20.106,22.448)
C1': (-2.330,-19.097,21.618)
C3': (-0.868,-18.023,20.071)
O5': (-0.806,-15.816,22.255)
O4': (-1.259,-18.564,22.367)
C5': (0.270,-16.713,21.981)
P: (-0.540,-14.340,22.817)
C4': (-0.243,-18.050,21.467)
C2': (-2.356,-18.299,20.315)
O2': (-2.964,-19.056,19.284)
N1: (-3.592,-19.026,22.440)
O4: (-6.953,-18.837,24.645)
O2: (-4.280,-21.134,21.819)
C6: (-3.864,-17.886,23.184)
C5: (-4.964,-17.751,23.941)
O3': (-0.246,-19.019,19.254)
N3: (-5.583,-19.943,23.232)
OP1: (0.581,-13.715,22.078)
OP2: (-1.847,-13.645,22.875)
C2: (-4.463,-20.106,22.448)
C1': (-2.330,-19.097,21.618)
C3': (-0.868,-18.023,20.071)
O5': (-0.806,-15.816,22.255)
O4': (-1.259,-18.564,22.367)
C5': (0.270,-16.713,21.981)
P: (-0.540,-14.340,22.817)
C4': (-0.243,-18.050,21.467)
C2': (-2.356,-18.299,20.315)
O2': (-2.964,-19.056,19.284)
N1: (-3.592,-19.026,22.440)
O4: (-6.953,-18.837,24.645)
O2: (-4.280,-21.134,21.819)
C6: (-3.864,-17.886,23.184)
C5: (-4.964,-17.751,23.941)
O3': (-0.246,-19.019,19.254)
C4: (-8.340,-9.523,22.056)
N3: (-6.970,-9.639,22.228)
OP1: (-10.977,-15.944,26.661)
OP2: (-9.324,-17.258,25.213)
C2: (-6.235,-10.800,22.343)
C1': (-6.311,-13.348,22.389)
C3': (-6.232,-13.854,24.693)
O5': (-8.831,-14.905,25.915)
O4': (-7.286,-14.350,22.625)
C5': (-8.724,-14.477,24.565)
P: (-9.582,-16.268,26.286)
C4': (-7.318,-14.701,24.034)
C2': (-5.305,-13.522,23.526)
O2': (-4.397,-14.565,23.220)
N1: (-6.979,-11.978,22.280)
O4: (-8.851,-8.411,21.968)
O2: (-5.025,-10.748,22.491)
C6: (-8.357,-11.921,22.103)
C5: (-9.049,-10.777,21.996)
O3': (-5.559,-14.590,25.719)
N3: (-6.970,-9.639,22.228)
OP1: (-10.977,-15.944,26.661)
OP2: (-9.324,-17.258,25.213)
C2: (-6.235,-10.800,22.343)
C1': (-6.311,-13.348,22.389)
C3': (-6.232,-13.854,24.693)
O5': (-8.831,-14.905,25.915)
O4': (-7.286,-14.350,22.625)
C5': (-8.724,-14.477,24.565)
P: (-9.582,-16.268,26.286)
C4': (-7.318,-14.701,24.034)
C2': (-5.305,-13.522,23.526)
O2': (-4.397,-14.565,23.220)
N1: (-6.979,-11.978,22.280)
O4: (-8.851,-8.411,21.968)
O2: (-5.025,-10.748,22.491)
C6: (-8.357,-11.921,22.103)
C5: (-9.049,-10.777,21.996)
O3': (-5.559,-14.590,25.719)
Image (generated by PyMOL):