ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2EES:A34:A32

Extra

PDB:
ATOM 1 O3' U A 33 -3.907 -16.846 -2.039 1.00 34.07 O
ATOM 2 P U A 34 -4.900 -17.829 -1.238 1.00 35.41 P
ATOM 3 OP1 U A 34 -4.456 -19.252 -1.269 1.00 31.45 O
ATOM 4 OP2 U A 34 -6.301 -17.494 -1.652 1.00 33.67 O
ATOM 5 O5' U A 34 -4.746 -17.338 0.283 1.00 34.27 O
ATOM 6 C5' U A 34 -3.649 -17.783 1.080 1.00 33.68 C
ATOM 7 C4' U A 34 -3.919 -17.555 2.553 1.00 33.30 C
ATOM 8 O4' U A 34 -3.742 -16.154 2.863 1.00 32.20 O
ATOM 9 C3' U A 34 -5.333 -17.924 2.993 1.00 33.98 C
ATOM 10 O3' U A 34 -5.294 -18.705 4.172 1.00 37.85 O
ATOM 11 C2' U A 34 -6.020 -16.570 3.189 1.00 32.28 C
ATOM 12 O2' U A 34 -7.038 -16.585 4.190 1.00 30.44 O
ATOM 13 C1' U A 34 -4.839 -15.707 3.645 1.00 30.28 C
ATOM 14 N1 U A 34 -5.006 -14.263 3.431 1.00 27.42 N
ATOM 15 C2 U A 34 -4.629 -13.463 4.476 1.00 26.25 C
ATOM 16 O2 U A 34 -4.233 -13.919 5.550 1.00 25.99 O
ATOM 17 N3 U A 34 -4.731 -12.123 4.247 1.00 26.00 N
ATOM 18 C4 U A 34 -5.169 -11.495 3.143 1.00 26.82 C
ATOM 19 O4 U A 34 -5.104 -10.266 3.103 1.00 25.40 O
ATOM 20 C5 U A 34 -5.605 -12.379 2.079 1.00 26.20 C
ATOM 21 C6 U A 34 -5.499 -13.709 2.262 1.00 27.25 C
ATOM 22 P C A 35 -6.501 -19.702 4.494 1.00 41.60 P
ATOM 23 OP1 C A 35 -6.308 -20.932 3.669 1.00 41.15 O
ATOM 24 OP2 C A 35 -7.799 -18.970 4.443 1.00 41.06 O
ATOM 25 O5' C A 35 -6.266 -20.152 5.978 1.00 41.54 O
TER

ATOM 1 O3' G B 31 -13.055 -15.473 -3.348 1.00 24.34 O
ATOM 2 P U B 32 -11.453 -15.605 -3.594 1.00 26.19 P
ATOM 3 OP1 U B 32 -11.302 -14.690 -4.768 1.00 26.69 O
ATOM 4 OP2 U B 32 -11.077 -16.985 -3.718 1.00 26.53 O
ATOM 5 O5' U B 32 -10.858 -14.998 -2.239 1.00 26.83 O
ATOM 6 C5' U B 32 -10.981 -13.600 -1.972 1.00 26.56 C
ATOM 7 C4' U B 32 -9.883 -13.117 -1.054 1.00 27.75 C
ATOM 8 O4' U B 32 -10.227 -13.487 0.315 1.00 28.01 O
ATOM 9 C3' U B 32 -8.506 -13.716 -1.324 1.00 29.00 C
ATOM 10 O3' U B 32 -7.457 -12.834 -0.909 1.00 30.79 O
ATOM 11 C2' U B 32 -8.494 -14.920 -0.408 1.00 27.64 C
ATOM 12 O2' U B 32 -7.206 -15.163 0.041 1.00 29.01 O
ATOM 13 C1' U B 32 -9.251 -14.390 0.815 1.00 26.78 C
ATOM 14 N1 U B 32 -9.856 -15.455 1.644 1.00 24.94 N
ATOM 15 C2 U B 32 -9.756 -15.343 3.030 1.00 24.75 C
ATOM 16 O2 U B 32 -9.392 -14.314 3.589 1.00 23.63 O
ATOM 17 N3 U B 32 -10.156 -16.443 3.734 1.00 24.31 N
ATOM 18 C4 U B 32 -10.762 -17.611 3.235 1.00 25.64 C
ATOM 19 O4 U B 32 -11.203 -18.476 4.027 1.00 23.16 O
ATOM 20 C5 U B 32 -10.929 -17.610 1.809 1.00 24.84 C
ATOM 21 C6 U B 32 -10.463 -16.566 1.081 1.00 26.09 C
ATOM 22 P U B 33 -6.646 -11.955 -1.988 1.00 32.78 P
ATOM 23 OP1 U B 33 -6.091 -10.787 -1.255 1.00 31.55 O
ATOM 24 OP2 U B 33 -7.500 -11.687 -3.190 1.00 33.19 O
ATOM 25 O5' U B 33 -5.461 -12.914 -2.438 1.00 32.70 O
TER

Atoms:
C4: (-5.169,-11.495,3.143)
N3: (-4.731,-12.123,4.247)
OP1: (-4.456,-19.252,-1.269)
OP2: (-6.301,-17.494,-1.652)
C2: (-4.629,-13.463,4.476)
C1': (-4.839,-15.707,3.645)
C3': (-5.333,-17.924,2.993)
O5': (-4.746,-17.338,0.283)
O4': (-3.742,-16.154,2.863)
C5': (-3.649,-17.783,1.080)
P: (-4.900,-17.829,-1.238)
C4': (-3.919,-17.555,2.553)
C2': (-6.020,-16.570,3.189)
O2': (-7.038,-16.585,4.190)
N1: (-5.006,-14.263,3.431)
O4: (-5.104,-10.266,3.103)
O2: (-4.233,-13.919,5.550)
C6: (-5.499,-13.709,2.262)
C5: (-5.605,-12.379,2.079)
O3': (-5.294,-18.705,4.172)
C4: (-10.762,-17.611,3.235)
N3: (-10.156,-16.443,3.734)
OP1: (-11.302,-14.690,-4.768)
OP2: (-11.077,-16.985,-3.718)
C2: (-9.756,-15.343,3.030)
C1': (-9.251,-14.390,0.815)
C3': (-8.506,-13.716,-1.324)
O5': (-10.858,-14.998,-2.239)
O4': (-10.227,-13.487,0.315)
C5': (-10.981,-13.600,-1.972)
P: (-11.453,-15.605,-3.594)
C4': (-9.883,-13.117,-1.054)
C2': (-8.494,-14.920,-0.408)
O2': (-7.206,-15.163,0.041)
N1: (-9.856,-15.455,1.644)
O4: (-11.203,-18.476,4.027)
O2: (-9.392,-14.314,3.589)
C6: (-10.463,-16.566,1.081)
C5: (-10.929,-17.610,1.809)
O3': (-7.457,-12.834,-0.909)
Image (generated by PyMOL):
PyMOL image
show in jmol