Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXM:A5:B39
Extra
PDB:
ATOM 1 O3' C A 4 11.130 -24.835 1.776 1.00 68.54 O
ATOM 2 P U A 5 11.418 -25.900 2.934 1.00 66.97 P
ATOM 3 OP1 U A 5 12.762 -25.611 3.495 1.00 66.50 O
ATOM 4 OP2 U A 5 11.123 -27.258 2.415 1.00 66.21 O
ATOM 5 O5' U A 5 10.293 -25.534 4.009 1.00 65.75 O
ATOM 6 C5' U A 5 10.351 -24.288 4.692 1.00 65.56 C
ATOM 7 C4' U A 5 9.046 -23.999 5.404 1.00 64.94 C
ATOM 8 O4' U A 5 7.939 -24.061 4.469 1.00 65.16 O
ATOM 9 C3' U A 5 8.661 -25.005 6.475 1.00 63.46 C
ATOM 10 O3' U A 5 9.378 -24.779 7.672 1.00 62.96 O
ATOM 11 C2' U A 5 7.169 -24.724 6.607 1.00 63.61 C
ATOM 12 O2' U A 5 6.870 -23.561 7.348 1.00 64.10 O
ATOM 13 C1' U A 5 6.784 -24.537 5.139 1.00 64.23 C
ATOM 14 N1 U A 5 6.277 -25.816 4.534 1.00 63.23 N
ATOM 15 C2 U A 5 4.965 -26.180 4.776 1.00 62.90 C
ATOM 16 O2 U A 5 4.199 -25.507 5.442 1.00 62.93 O
ATOM 17 N3 U A 5 4.574 -27.368 4.202 1.00 62.82 N
ATOM 18 C4 U A 5 5.351 -28.219 3.431 1.00 63.05 C
ATOM 19 O4 U A 5 4.863 -29.253 2.981 1.00 63.40 O
ATOM 20 C5 U A 5 6.710 -27.780 3.226 1.00 63.04 C
ATOM 21 C6 U A 5 7.111 -26.623 3.774 1.00 63.23 C
ATOM 22 P G A 6 9.951 -26.035 8.482 1.00 61.76 P
ATOM 23 OP1 G A 6 11.164 -25.586 9.203 1.00 61.98 O
ATOM 24 OP2 G A 6 10.021 -27.207 7.576 1.00 60.90 O
ATOM 25 O5' G A 6 8.786 -26.309 9.542 1.00 61.07 O
TER
ATOM 1 O3' C B 38 6.717 -17.932 14.407 1.00 66.82 O
ATOM 2 P A B 39 7.440 -17.265 13.137 1.00 66.79 P
ATOM 3 OP1 A B 39 8.828 -16.952 13.549 1.00 66.58 O
ATOM 4 OP2 A B 39 6.573 -16.201 12.575 1.00 66.70 O
ATOM 5 O5' A B 39 7.459 -18.474 12.094 1.00 65.48 O
ATOM 6 C5' A B 39 8.412 -19.515 12.245 1.00 64.72 C
ATOM 7 C4' A B 39 8.319 -20.490 11.088 1.00 64.38 C
ATOM 8 O4' A B 39 7.092 -21.251 11.215 1.00 63.84 O
ATOM 9 C3' A B 39 8.228 -19.878 9.694 1.00 64.86 C
ATOM 10 O3' A B 39 9.518 -19.508 9.200 1.00 65.79 O
ATOM 11 C2' A B 39 7.621 -21.039 8.919 1.00 63.84 C
ATOM 12 O2' A B 39 8.567 -22.040 8.594 1.00 63.48 O
ATOM 13 C1' A B 39 6.619 -21.598 9.926 1.00 63.08 C
ATOM 14 N9 A B 39 5.256 -21.094 9.748 1.00 62.20 N
ATOM 15 C8 A B 39 4.694 -19.989 10.327 1.00 62.27 C
ATOM 16 N7 A B 39 3.446 -19.780 9.979 1.00 62.07 N
ATOM 17 C5 A B 39 3.168 -20.820 9.112 1.00 61.34 C
ATOM 18 C6 A B 39 2.009 -21.174 8.394 1.00 61.23 C
ATOM 19 N6 A B 39 0.873 -20.475 8.447 1.00 61.81 N
ATOM 20 N1 A B 39 2.060 -22.275 7.615 1.00 60.87 N
ATOM 21 C2 A B 39 3.202 -22.976 7.559 1.00 60.48 C
ATOM 22 N3 A B 39 4.354 -22.742 8.189 1.00 60.37 N
ATOM 23 C4 A B 39 4.271 -21.640 8.957 1.00 61.22 C
ATOM 24 P A B 40 9.727 -18.268 8.198 1.00 67.04 P
ATOM 25 OP1 A B 40 11.191 -18.067 8.099 1.00 67.13 O
ATOM 26 OP2 A B 40 8.864 -17.131 8.593 1.00 67.35 O
ATOM 27 O5' A B 40 9.159 -18.817 6.809 1.00 67.33 O
TER
ATOM 2 P U A 5 11.418 -25.900 2.934 1.00 66.97 P
ATOM 3 OP1 U A 5 12.762 -25.611 3.495 1.00 66.50 O
ATOM 4 OP2 U A 5 11.123 -27.258 2.415 1.00 66.21 O
ATOM 5 O5' U A 5 10.293 -25.534 4.009 1.00 65.75 O
ATOM 6 C5' U A 5 10.351 -24.288 4.692 1.00 65.56 C
ATOM 7 C4' U A 5 9.046 -23.999 5.404 1.00 64.94 C
ATOM 8 O4' U A 5 7.939 -24.061 4.469 1.00 65.16 O
ATOM 9 C3' U A 5 8.661 -25.005 6.475 1.00 63.46 C
ATOM 10 O3' U A 5 9.378 -24.779 7.672 1.00 62.96 O
ATOM 11 C2' U A 5 7.169 -24.724 6.607 1.00 63.61 C
ATOM 12 O2' U A 5 6.870 -23.561 7.348 1.00 64.10 O
ATOM 13 C1' U A 5 6.784 -24.537 5.139 1.00 64.23 C
ATOM 14 N1 U A 5 6.277 -25.816 4.534 1.00 63.23 N
ATOM 15 C2 U A 5 4.965 -26.180 4.776 1.00 62.90 C
ATOM 16 O2 U A 5 4.199 -25.507 5.442 1.00 62.93 O
ATOM 17 N3 U A 5 4.574 -27.368 4.202 1.00 62.82 N
ATOM 18 C4 U A 5 5.351 -28.219 3.431 1.00 63.05 C
ATOM 19 O4 U A 5 4.863 -29.253 2.981 1.00 63.40 O
ATOM 20 C5 U A 5 6.710 -27.780 3.226 1.00 63.04 C
ATOM 21 C6 U A 5 7.111 -26.623 3.774 1.00 63.23 C
ATOM 22 P G A 6 9.951 -26.035 8.482 1.00 61.76 P
ATOM 23 OP1 G A 6 11.164 -25.586 9.203 1.00 61.98 O
ATOM 24 OP2 G A 6 10.021 -27.207 7.576 1.00 60.90 O
ATOM 25 O5' G A 6 8.786 -26.309 9.542 1.00 61.07 O
TER
ATOM 1 O3' C B 38 6.717 -17.932 14.407 1.00 66.82 O
ATOM 2 P A B 39 7.440 -17.265 13.137 1.00 66.79 P
ATOM 3 OP1 A B 39 8.828 -16.952 13.549 1.00 66.58 O
ATOM 4 OP2 A B 39 6.573 -16.201 12.575 1.00 66.70 O
ATOM 5 O5' A B 39 7.459 -18.474 12.094 1.00 65.48 O
ATOM 6 C5' A B 39 8.412 -19.515 12.245 1.00 64.72 C
ATOM 7 C4' A B 39 8.319 -20.490 11.088 1.00 64.38 C
ATOM 8 O4' A B 39 7.092 -21.251 11.215 1.00 63.84 O
ATOM 9 C3' A B 39 8.228 -19.878 9.694 1.00 64.86 C
ATOM 10 O3' A B 39 9.518 -19.508 9.200 1.00 65.79 O
ATOM 11 C2' A B 39 7.621 -21.039 8.919 1.00 63.84 C
ATOM 12 O2' A B 39 8.567 -22.040 8.594 1.00 63.48 O
ATOM 13 C1' A B 39 6.619 -21.598 9.926 1.00 63.08 C
ATOM 14 N9 A B 39 5.256 -21.094 9.748 1.00 62.20 N
ATOM 15 C8 A B 39 4.694 -19.989 10.327 1.00 62.27 C
ATOM 16 N7 A B 39 3.446 -19.780 9.979 1.00 62.07 N
ATOM 17 C5 A B 39 3.168 -20.820 9.112 1.00 61.34 C
ATOM 18 C6 A B 39 2.009 -21.174 8.394 1.00 61.23 C
ATOM 19 N6 A B 39 0.873 -20.475 8.447 1.00 61.81 N
ATOM 20 N1 A B 39 2.060 -22.275 7.615 1.00 60.87 N
ATOM 21 C2 A B 39 3.202 -22.976 7.559 1.00 60.48 C
ATOM 22 N3 A B 39 4.354 -22.742 8.189 1.00 60.37 N
ATOM 23 C4 A B 39 4.271 -21.640 8.957 1.00 61.22 C
ATOM 24 P A B 40 9.727 -18.268 8.198 1.00 67.04 P
ATOM 25 OP1 A B 40 11.191 -18.067 8.099 1.00 67.13 O
ATOM 26 OP2 A B 40 8.864 -17.131 8.593 1.00 67.35 O
ATOM 27 O5' A B 40 9.159 -18.817 6.809 1.00 67.33 O
TER
Atoms:
C4: (5.351,-28.219,3.431)
N3: (4.574,-27.368,4.202)
OP1: (12.762,-25.611,3.495)
OP2: (11.123,-27.258,2.415)
C2: (4.965,-26.180,4.776)
C1': (6.784,-24.537,5.139)
C3': (8.661,-25.005,6.475)
O5': (10.293,-25.534,4.009)
O4': (7.939,-24.061,4.469)
C5': (10.351,-24.288,4.692)
P: (11.418,-25.900,2.934)
C4': (9.046,-23.999,5.404)
C2': (7.169,-24.724,6.607)
O2': (6.870,-23.561,7.348)
N1: (6.277,-25.816,4.534)
O4: (4.863,-29.253,2.981)
O2: (4.199,-25.507,5.442)
C6: (7.111,-26.623,3.774)
C5: (6.710,-27.780,3.226)
O3': (9.378,-24.779,7.672)
N3: (4.574,-27.368,4.202)
OP1: (12.762,-25.611,3.495)
OP2: (11.123,-27.258,2.415)
C2: (4.965,-26.180,4.776)
C1': (6.784,-24.537,5.139)
C3': (8.661,-25.005,6.475)
O5': (10.293,-25.534,4.009)
O4': (7.939,-24.061,4.469)
C5': (10.351,-24.288,4.692)
P: (11.418,-25.900,2.934)
C4': (9.046,-23.999,5.404)
C2': (7.169,-24.724,6.607)
O2': (6.870,-23.561,7.348)
N1: (6.277,-25.816,4.534)
O4: (4.863,-29.253,2.981)
O2: (4.199,-25.507,5.442)
C6: (7.111,-26.623,3.774)
C5: (6.710,-27.780,3.226)
O3': (9.378,-24.779,7.672)
OP1: (8.828,-16.952,13.549)
OP2: (6.573,-16.201,12.575)
C3': (8.228,-19.878,9.694)
C1': (6.619,-21.598,9.926)
C5': (8.412,-19.515,12.245)
O4': (7.092,-21.251,11.215)
C8: (4.694,-19.989,10.327)
O2': (8.567,-22.040,8.594)
C6: (2.009,-21.174,8.394)
C5: (3.168,-20.820,9.112)
C4: (4.271,-21.640,8.957)
P: (7.440,-17.265,13.137)
C4': (8.319,-20.490,11.088)
C2': (7.621,-21.039,8.919)
C2: (3.202,-22.976,7.559)
N1: (2.060,-22.275,7.615)
N3: (4.354,-22.742,8.189)
N6: (0.873,-20.475,8.447)
N7: (3.446,-19.780,9.979)
N9: (5.256,-21.094,9.748)
O5': (7.459,-18.474,12.094)
O3': (9.518,-19.508,9.200)
OP2: (6.573,-16.201,12.575)
C3': (8.228,-19.878,9.694)
C1': (6.619,-21.598,9.926)
C5': (8.412,-19.515,12.245)
O4': (7.092,-21.251,11.215)
C8: (4.694,-19.989,10.327)
O2': (8.567,-22.040,8.594)
C6: (2.009,-21.174,8.394)
C5: (3.168,-20.820,9.112)
C4: (4.271,-21.640,8.957)
P: (7.440,-17.265,13.137)
C4': (8.319,-20.490,11.088)
C2': (7.621,-21.039,8.919)
C2: (3.202,-22.976,7.559)
N1: (2.060,-22.275,7.615)
N3: (4.354,-22.742,8.189)
N6: (0.873,-20.475,8.447)
N7: (3.446,-19.780,9.979)
N9: (5.256,-21.094,9.748)
O5': (7.459,-18.474,12.094)
O3': (9.518,-19.508,9.200)
Image (generated by PyMOL):