Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3BOY:D20:D19
Extra
PDB:
ATOM 1 O3' U A 19 5.084 -9.375 7.587 1.00 60.14 O
ATOM 2 P U A 20 6.467 -9.428 8.389 1.00 61.13 P
ATOM 3 OP1 U A 20 6.403 -8.473 9.520 1.00 60.82 O
ATOM 4 OP2 U A 20 7.530 -9.292 7.364 1.00 61.59 O
ATOM 5 O5' U A 20 6.594 -10.925 8.949 1.00 60.41 O
ATOM 6 C5' U A 20 6.062 -11.340 10.204 1.00 56.72 C
ATOM 7 C4' U A 20 4.895 -12.284 9.983 1.00 54.77 C
ATOM 8 O4' U A 20 3.666 -11.599 10.301 1.00 50.62 O
ATOM 9 C3' U A 20 4.732 -12.753 8.533 1.00 54.63 C
ATOM 10 O3' U A 20 5.389 -14.014 8.295 1.00 58.79 O
ATOM 11 C2' U A 20 3.217 -12.776 8.294 1.00 52.21 C
ATOM 12 O2' U A 20 2.682 -14.063 8.037 1.00 52.39 O
ATOM 13 C1' U A 20 2.630 -12.244 9.605 1.00 48.50 C
ATOM 14 N1 U A 20 1.514 -11.309 9.351 1.00 44.41 N
ATOM 15 C2 U A 20 0.224 -11.693 9.685 1.00 43.37 C
ATOM 16 O2 U A 20 -0.050 -12.766 10.212 1.00 41.53 O
ATOM 17 N3 U A 20 -0.741 -10.754 9.382 1.00 42.27 N
ATOM 18 C4 U A 20 -0.548 -9.506 8.795 1.00 43.65 C
ATOM 19 O4 U A 20 -1.502 -8.774 8.590 1.00 41.81 O
ATOM 20 C5 U A 20 0.824 -9.186 8.473 1.00 43.25 C
ATOM 21 C6 U A 20 1.778 -10.087 8.756 1.00 43.34 C
TER
ATOM 1 O3' G B 18 3.097 -3.067 6.465 1.00 34.96 O
ATOM 2 P U B 19 4.501 -3.780 6.691 1.00 39.69 P
ATOM 3 OP1 U B 19 5.022 -3.444 8.030 1.00 43.11 O
ATOM 4 OP2 U B 19 5.305 -3.422 5.503 1.00 44.10 O
ATOM 5 O5' U B 19 4.168 -5.317 6.509 1.00 44.57 O
ATOM 6 C5' U B 19 3.656 -6.084 7.587 1.00 52.33 C
ATOM 7 C4' U B 19 3.525 -7.538 7.159 1.00 57.28 C
ATOM 8 O4' U B 19 2.605 -7.638 6.042 1.00 58.35 O
ATOM 9 C3' U B 19 4.830 -8.229 6.755 1.00 59.33 C
ATOM 10 O3' U B 19 5.084 -9.375 7.587 1.00 60.14 O
ATOM 11 C2' U B 19 4.684 -8.558 5.262 1.00 60.60 C
ATOM 12 O2' U B 19 5.036 -9.896 4.948 1.00 61.69 O
ATOM 13 C1' U B 19 3.205 -8.301 4.943 1.00 61.83 C
ATOM 14 N1 U B 19 2.953 -7.445 3.722 1.00 63.66 N
ATOM 15 C2 U B 19 2.287 -7.977 2.619 1.00 64.28 C
ATOM 16 O2 U B 19 1.881 -9.125 2.542 1.00 64.51 O
ATOM 17 N3 U B 19 2.109 -7.096 1.576 1.00 64.44 N
ATOM 18 C4 U B 19 2.516 -5.769 1.522 1.00 63.88 C
ATOM 19 O4 U B 19 2.276 -5.113 0.517 1.00 64.03 O
ATOM 20 C5 U B 19 3.198 -5.276 2.697 1.00 64.55 C
ATOM 21 C6 U B 19 3.380 -6.118 3.727 1.00 64.35 C
ATOM 22 P U B 20 6.467 -9.428 8.389 1.00 61.13 P
ATOM 23 OP1 U B 20 6.403 -8.473 9.520 1.00 60.82 O
ATOM 24 OP2 U B 20 7.530 -9.292 7.364 1.00 61.59 O
ATOM 25 O5' U B 20 6.594 -10.925 8.949 1.00 60.41 O
TER
ATOM 2 P U A 20 6.467 -9.428 8.389 1.00 61.13 P
ATOM 3 OP1 U A 20 6.403 -8.473 9.520 1.00 60.82 O
ATOM 4 OP2 U A 20 7.530 -9.292 7.364 1.00 61.59 O
ATOM 5 O5' U A 20 6.594 -10.925 8.949 1.00 60.41 O
ATOM 6 C5' U A 20 6.062 -11.340 10.204 1.00 56.72 C
ATOM 7 C4' U A 20 4.895 -12.284 9.983 1.00 54.77 C
ATOM 8 O4' U A 20 3.666 -11.599 10.301 1.00 50.62 O
ATOM 9 C3' U A 20 4.732 -12.753 8.533 1.00 54.63 C
ATOM 10 O3' U A 20 5.389 -14.014 8.295 1.00 58.79 O
ATOM 11 C2' U A 20 3.217 -12.776 8.294 1.00 52.21 C
ATOM 12 O2' U A 20 2.682 -14.063 8.037 1.00 52.39 O
ATOM 13 C1' U A 20 2.630 -12.244 9.605 1.00 48.50 C
ATOM 14 N1 U A 20 1.514 -11.309 9.351 1.00 44.41 N
ATOM 15 C2 U A 20 0.224 -11.693 9.685 1.00 43.37 C
ATOM 16 O2 U A 20 -0.050 -12.766 10.212 1.00 41.53 O
ATOM 17 N3 U A 20 -0.741 -10.754 9.382 1.00 42.27 N
ATOM 18 C4 U A 20 -0.548 -9.506 8.795 1.00 43.65 C
ATOM 19 O4 U A 20 -1.502 -8.774 8.590 1.00 41.81 O
ATOM 20 C5 U A 20 0.824 -9.186 8.473 1.00 43.25 C
ATOM 21 C6 U A 20 1.778 -10.087 8.756 1.00 43.34 C
TER
ATOM 1 O3' G B 18 3.097 -3.067 6.465 1.00 34.96 O
ATOM 2 P U B 19 4.501 -3.780 6.691 1.00 39.69 P
ATOM 3 OP1 U B 19 5.022 -3.444 8.030 1.00 43.11 O
ATOM 4 OP2 U B 19 5.305 -3.422 5.503 1.00 44.10 O
ATOM 5 O5' U B 19 4.168 -5.317 6.509 1.00 44.57 O
ATOM 6 C5' U B 19 3.656 -6.084 7.587 1.00 52.33 C
ATOM 7 C4' U B 19 3.525 -7.538 7.159 1.00 57.28 C
ATOM 8 O4' U B 19 2.605 -7.638 6.042 1.00 58.35 O
ATOM 9 C3' U B 19 4.830 -8.229 6.755 1.00 59.33 C
ATOM 10 O3' U B 19 5.084 -9.375 7.587 1.00 60.14 O
ATOM 11 C2' U B 19 4.684 -8.558 5.262 1.00 60.60 C
ATOM 12 O2' U B 19 5.036 -9.896 4.948 1.00 61.69 O
ATOM 13 C1' U B 19 3.205 -8.301 4.943 1.00 61.83 C
ATOM 14 N1 U B 19 2.953 -7.445 3.722 1.00 63.66 N
ATOM 15 C2 U B 19 2.287 -7.977 2.619 1.00 64.28 C
ATOM 16 O2 U B 19 1.881 -9.125 2.542 1.00 64.51 O
ATOM 17 N3 U B 19 2.109 -7.096 1.576 1.00 64.44 N
ATOM 18 C4 U B 19 2.516 -5.769 1.522 1.00 63.88 C
ATOM 19 O4 U B 19 2.276 -5.113 0.517 1.00 64.03 O
ATOM 20 C5 U B 19 3.198 -5.276 2.697 1.00 64.55 C
ATOM 21 C6 U B 19 3.380 -6.118 3.727 1.00 64.35 C
ATOM 22 P U B 20 6.467 -9.428 8.389 1.00 61.13 P
ATOM 23 OP1 U B 20 6.403 -8.473 9.520 1.00 60.82 O
ATOM 24 OP2 U B 20 7.530 -9.292 7.364 1.00 61.59 O
ATOM 25 O5' U B 20 6.594 -10.925 8.949 1.00 60.41 O
TER
Atoms:
C4: (-0.548,-9.506,8.795)
N3: (-0.741,-10.754,9.382)
OP1: (6.403,-8.473,9.520)
OP2: (7.530,-9.292,7.364)
C2: (0.224,-11.693,9.685)
C1': (2.630,-12.244,9.605)
C3': (4.732,-12.753,8.533)
O5': (6.594,-10.925,8.949)
O4': (3.666,-11.599,10.301)
C5': (6.062,-11.340,10.204)
P: (6.467,-9.428,8.389)
C4': (4.895,-12.284,9.983)
C2': (3.217,-12.776,8.294)
O2': (2.682,-14.063,8.037)
N1: (1.514,-11.309,9.351)
O4: (-1.502,-8.774,8.590)
O2: (-0.050,-12.766,10.212)
C6: (1.778,-10.087,8.756)
C5: (0.824,-9.186,8.473)
O3': (5.389,-14.014,8.295)
N3: (-0.741,-10.754,9.382)
OP1: (6.403,-8.473,9.520)
OP2: (7.530,-9.292,7.364)
C2: (0.224,-11.693,9.685)
C1': (2.630,-12.244,9.605)
C3': (4.732,-12.753,8.533)
O5': (6.594,-10.925,8.949)
O4': (3.666,-11.599,10.301)
C5': (6.062,-11.340,10.204)
P: (6.467,-9.428,8.389)
C4': (4.895,-12.284,9.983)
C2': (3.217,-12.776,8.294)
O2': (2.682,-14.063,8.037)
N1: (1.514,-11.309,9.351)
O4: (-1.502,-8.774,8.590)
O2: (-0.050,-12.766,10.212)
C6: (1.778,-10.087,8.756)
C5: (0.824,-9.186,8.473)
O3': (5.389,-14.014,8.295)
C4: (2.516,-5.769,1.522)
N3: (2.109,-7.096,1.576)
OP1: (5.022,-3.444,8.030)
OP2: (5.305,-3.422,5.503)
C2: (2.287,-7.977,2.619)
C1': (3.205,-8.301,4.943)
C3': (4.830,-8.229,6.755)
O5': (4.168,-5.317,6.509)
O4': (2.605,-7.638,6.042)
C5': (3.656,-6.084,7.587)
P: (4.501,-3.780,6.691)
C4': (3.525,-7.538,7.159)
C2': (4.684,-8.558,5.262)
O2': (5.036,-9.896,4.948)
N1: (2.953,-7.445,3.722)
O4: (2.276,-5.113,0.517)
O2: (1.881,-9.125,2.542)
C6: (3.380,-6.118,3.727)
C5: (3.198,-5.276,2.697)
O3': (5.084,-9.375,7.587)
N3: (2.109,-7.096,1.576)
OP1: (5.022,-3.444,8.030)
OP2: (5.305,-3.422,5.503)
C2: (2.287,-7.977,2.619)
C1': (3.205,-8.301,4.943)
C3': (4.830,-8.229,6.755)
O5': (4.168,-5.317,6.509)
O4': (2.605,-7.638,6.042)
C5': (3.656,-6.084,7.587)
P: (4.501,-3.780,6.691)
C4': (3.525,-7.538,7.159)
C2': (4.684,-8.558,5.262)
O2': (5.036,-9.896,4.948)
N1: (2.953,-7.445,3.722)
O4: (2.276,-5.113,0.517)
O2: (1.881,-9.125,2.542)
C6: (3.380,-6.118,3.727)
C5: (3.198,-5.276,2.697)
O3': (5.084,-9.375,7.587)
Image (generated by PyMOL):