Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2073:A1888
Extra
PDB:
ATOM 1 O3' C A2072 112.168 108.488 57.021 1.00 57.55 O
ATOM 2 P U A2073 112.672 108.297 55.495 1.00 60.46 P
ATOM 3 OP1 U A2073 114.135 108.526 55.567 1.00 61.68 O
ATOM 4 OP2 U A2073 111.833 109.133 54.573 1.00 60.14 O
ATOM 5 O5' U A2073 112.384 106.772 55.136 1.00 59.66 O
ATOM 6 C5' U A2073 113.046 105.696 55.821 1.00 60.27 C
ATOM 7 C4' U A2073 112.354 104.381 55.508 1.00 60.62 C
ATOM 8 O4' U A2073 110.993 104.375 56.035 1.00 59.59 O
ATOM 9 C3' U A2073 112.183 104.005 54.041 1.00 60.37 C
ATOM 10 O3' U A2073 113.361 103.446 53.461 1.00 61.30 O
ATOM 11 C2' U A2073 111.072 102.972 54.132 1.00 59.40 C
ATOM 12 O2' U A2073 111.598 101.744 54.591 1.00 58.85 O
ATOM 13 C1' U A2073 110.164 103.583 55.204 1.00 58.57 C
ATOM 14 N1 U A2073 109.118 104.448 54.618 1.00 58.19 N
ATOM 15 C2 U A2073 107.971 103.835 54.143 1.00 56.54 C
ATOM 16 O2 U A2073 107.768 102.660 54.269 1.00 55.21 O
ATOM 17 N3 U A2073 107.063 104.671 53.532 1.00 56.59 N
ATOM 18 C4 U A2073 107.165 106.050 53.375 1.00 58.88 C
ATOM 19 O4 U A2073 106.329 106.647 52.696 1.00 59.31 O
ATOM 20 C5 U A2073 108.353 106.632 53.940 1.00 59.04 C
ATOM 21 C6 U A2073 109.271 105.834 54.518 1.00 59.33 C
ATOM 22 P G A2074 113.598 103.562 51.875 1.00 61.06 P
ATOM 23 OP1 G A2074 115.032 103.365 51.636 1.00 63.03 O
ATOM 24 OP2 G A2074 112.926 104.795 51.378 1.00 63.21 O
ATOM 25 O5' G A2074 112.885 102.301 51.242 1.00 58.66 O
TER
ATOM 1 O3' G B1887 117.104 94.081 54.540 1.00 86.54 O
ATOM 2 P A B1888 116.819 94.959 55.863 1.00 83.89 P
ATOM 3 OP1 A B1888 118.122 95.589 56.207 1.00 84.80 O
ATOM 4 OP2 A B1888 116.144 94.110 56.861 1.00 83.36 O
ATOM 5 O5' A B1888 115.807 96.102 55.373 1.00 81.22 O
ATOM 6 C5' A B1888 116.264 97.134 54.459 1.00 76.37 C
ATOM 7 C4' A B1888 115.376 98.366 54.507 1.00 73.01 C
ATOM 8 O4' A B1888 114.143 98.126 53.793 1.00 71.77 O
ATOM 9 C3' A B1888 114.925 98.874 55.869 1.00 70.69 C
ATOM 10 O3' A B1888 115.934 99.618 56.535 1.00 68.39 O
ATOM 11 C2' A B1888 113.713 99.723 55.507 1.00 71.08 C
ATOM 12 O2' A B1888 114.015 101.002 54.976 1.00 71.21 O
ATOM 13 C1' A B1888 113.102 98.874 54.395 1.00 71.14 C
ATOM 14 N9 A B1888 112.118 97.931 54.902 1.00 69.95 N
ATOM 15 C8 A B1888 112.271 96.621 55.269 1.00 68.88 C
ATOM 16 N7 A B1888 111.153 96.045 55.626 1.00 69.19 N
ATOM 17 C5 A B1888 110.205 97.050 55.496 1.00 69.65 C
ATOM 18 C6 A B1888 108.819 97.077 55.704 1.00 69.74 C
ATOM 19 N6 A B1888 108.113 96.023 56.110 1.00 68.94 N
ATOM 20 N1 A B1888 108.174 98.243 55.477 1.00 70.64 N
ATOM 21 C2 A B1888 108.888 99.307 55.075 1.00 71.32 C
ATOM 22 N3 A B1888 110.190 99.400 54.846 1.00 71.12 N
ATOM 23 C4 A B1888 110.793 98.221 55.073 1.00 70.18 C
ATOM 24 P A B1889 116.021 99.566 58.137 1.00 67.14 P
ATOM 25 OP1 A B1889 117.275 100.229 58.594 1.00 66.86 O
ATOM 26 OP2 A B1889 115.739 98.169 58.555 1.00 65.42 O
ATOM 27 O5' A B1889 114.805 100.483 58.596 1.00 66.78 O
TER
ATOM 2 P U A2073 112.672 108.297 55.495 1.00 60.46 P
ATOM 3 OP1 U A2073 114.135 108.526 55.567 1.00 61.68 O
ATOM 4 OP2 U A2073 111.833 109.133 54.573 1.00 60.14 O
ATOM 5 O5' U A2073 112.384 106.772 55.136 1.00 59.66 O
ATOM 6 C5' U A2073 113.046 105.696 55.821 1.00 60.27 C
ATOM 7 C4' U A2073 112.354 104.381 55.508 1.00 60.62 C
ATOM 8 O4' U A2073 110.993 104.375 56.035 1.00 59.59 O
ATOM 9 C3' U A2073 112.183 104.005 54.041 1.00 60.37 C
ATOM 10 O3' U A2073 113.361 103.446 53.461 1.00 61.30 O
ATOM 11 C2' U A2073 111.072 102.972 54.132 1.00 59.40 C
ATOM 12 O2' U A2073 111.598 101.744 54.591 1.00 58.85 O
ATOM 13 C1' U A2073 110.164 103.583 55.204 1.00 58.57 C
ATOM 14 N1 U A2073 109.118 104.448 54.618 1.00 58.19 N
ATOM 15 C2 U A2073 107.971 103.835 54.143 1.00 56.54 C
ATOM 16 O2 U A2073 107.768 102.660 54.269 1.00 55.21 O
ATOM 17 N3 U A2073 107.063 104.671 53.532 1.00 56.59 N
ATOM 18 C4 U A2073 107.165 106.050 53.375 1.00 58.88 C
ATOM 19 O4 U A2073 106.329 106.647 52.696 1.00 59.31 O
ATOM 20 C5 U A2073 108.353 106.632 53.940 1.00 59.04 C
ATOM 21 C6 U A2073 109.271 105.834 54.518 1.00 59.33 C
ATOM 22 P G A2074 113.598 103.562 51.875 1.00 61.06 P
ATOM 23 OP1 G A2074 115.032 103.365 51.636 1.00 63.03 O
ATOM 24 OP2 G A2074 112.926 104.795 51.378 1.00 63.21 O
ATOM 25 O5' G A2074 112.885 102.301 51.242 1.00 58.66 O
TER
ATOM 1 O3' G B1887 117.104 94.081 54.540 1.00 86.54 O
ATOM 2 P A B1888 116.819 94.959 55.863 1.00 83.89 P
ATOM 3 OP1 A B1888 118.122 95.589 56.207 1.00 84.80 O
ATOM 4 OP2 A B1888 116.144 94.110 56.861 1.00 83.36 O
ATOM 5 O5' A B1888 115.807 96.102 55.373 1.00 81.22 O
ATOM 6 C5' A B1888 116.264 97.134 54.459 1.00 76.37 C
ATOM 7 C4' A B1888 115.376 98.366 54.507 1.00 73.01 C
ATOM 8 O4' A B1888 114.143 98.126 53.793 1.00 71.77 O
ATOM 9 C3' A B1888 114.925 98.874 55.869 1.00 70.69 C
ATOM 10 O3' A B1888 115.934 99.618 56.535 1.00 68.39 O
ATOM 11 C2' A B1888 113.713 99.723 55.507 1.00 71.08 C
ATOM 12 O2' A B1888 114.015 101.002 54.976 1.00 71.21 O
ATOM 13 C1' A B1888 113.102 98.874 54.395 1.00 71.14 C
ATOM 14 N9 A B1888 112.118 97.931 54.902 1.00 69.95 N
ATOM 15 C8 A B1888 112.271 96.621 55.269 1.00 68.88 C
ATOM 16 N7 A B1888 111.153 96.045 55.626 1.00 69.19 N
ATOM 17 C5 A B1888 110.205 97.050 55.496 1.00 69.65 C
ATOM 18 C6 A B1888 108.819 97.077 55.704 1.00 69.74 C
ATOM 19 N6 A B1888 108.113 96.023 56.110 1.00 68.94 N
ATOM 20 N1 A B1888 108.174 98.243 55.477 1.00 70.64 N
ATOM 21 C2 A B1888 108.888 99.307 55.075 1.00 71.32 C
ATOM 22 N3 A B1888 110.190 99.400 54.846 1.00 71.12 N
ATOM 23 C4 A B1888 110.793 98.221 55.073 1.00 70.18 C
ATOM 24 P A B1889 116.021 99.566 58.137 1.00 67.14 P
ATOM 25 OP1 A B1889 117.275 100.229 58.594 1.00 66.86 O
ATOM 26 OP2 A B1889 115.739 98.169 58.555 1.00 65.42 O
ATOM 27 O5' A B1889 114.805 100.483 58.596 1.00 66.78 O
TER
Atoms:
C4: (107.165,106.050,53.375)
N3: (107.063,104.671,53.532)
OP1: (114.135,108.526,55.567)
OP2: (111.833,109.133,54.573)
C2: (107.971,103.835,54.143)
C1': (110.164,103.583,55.204)
C3': (112.183,104.005,54.041)
O5': (112.384,106.772,55.136)
O4': (110.993,104.375,56.035)
C5': (113.046,105.696,55.821)
P: (112.672,108.297,55.495)
C4': (112.354,104.381,55.508)
C2': (111.072,102.972,54.132)
O2': (111.598,101.744,54.591)
N1: (109.118,104.448,54.618)
O4: (106.329,106.647,52.696)
O2: (107.768,102.660,54.269)
C6: (109.271,105.834,54.518)
C5: (108.353,106.632,53.940)
O3': (113.361,103.446,53.461)
N3: (107.063,104.671,53.532)
OP1: (114.135,108.526,55.567)
OP2: (111.833,109.133,54.573)
C2: (107.971,103.835,54.143)
C1': (110.164,103.583,55.204)
C3': (112.183,104.005,54.041)
O5': (112.384,106.772,55.136)
O4': (110.993,104.375,56.035)
C5': (113.046,105.696,55.821)
P: (112.672,108.297,55.495)
C4': (112.354,104.381,55.508)
C2': (111.072,102.972,54.132)
O2': (111.598,101.744,54.591)
N1: (109.118,104.448,54.618)
O4: (106.329,106.647,52.696)
O2: (107.768,102.660,54.269)
C6: (109.271,105.834,54.518)
C5: (108.353,106.632,53.940)
O3': (113.361,103.446,53.461)
OP1: (118.122,95.589,56.207)
OP2: (116.144,94.110,56.861)
C3': (114.925,98.874,55.869)
C1': (113.102,98.874,54.395)
C5': (116.264,97.134,54.459)
O4': (114.143,98.126,53.793)
C8: (112.271,96.621,55.269)
O2': (114.015,101.002,54.976)
C6: (108.819,97.077,55.704)
C5: (110.205,97.050,55.496)
C4: (110.793,98.221,55.073)
P: (116.819,94.959,55.863)
C4': (115.376,98.366,54.507)
C2': (113.713,99.723,55.507)
C2: (108.888,99.307,55.075)
N1: (108.174,98.243,55.477)
N3: (110.190,99.400,54.846)
N6: (108.113,96.023,56.110)
N7: (111.153,96.045,55.626)
N9: (112.118,97.931,54.902)
O5': (115.807,96.102,55.373)
O3': (115.934,99.618,56.535)
OP2: (116.144,94.110,56.861)
C3': (114.925,98.874,55.869)
C1': (113.102,98.874,54.395)
C5': (116.264,97.134,54.459)
O4': (114.143,98.126,53.793)
C8: (112.271,96.621,55.269)
O2': (114.015,101.002,54.976)
C6: (108.819,97.077,55.704)
C5: (110.205,97.050,55.496)
C4: (110.793,98.221,55.073)
P: (116.819,94.959,55.863)
C4': (115.376,98.366,54.507)
C2': (113.713,99.723,55.507)
C2: (108.888,99.307,55.075)
N1: (108.174,98.243,55.477)
N3: (110.190,99.400,54.846)
N6: (108.113,96.023,56.110)
N7: (111.153,96.045,55.626)
N9: (112.118,97.931,54.902)
O5': (115.807,96.102,55.373)
O3': (115.934,99.618,56.535)
Image (generated by PyMOL):