Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:A39:A38
Extra
PDB:
ATOM 1 O3' U A 38 -16.815 0.909 -13.479 1.00 27.02 O
ATOM 2 P U A 39 -17.253 -0.620 -13.689 1.00 31.88 P
ATOM 3 OP1 U A 39 -16.729 -1.060 -14.998 1.00 26.84 O
ATOM 4 OP2 U A 39 -18.697 -0.730 -13.386 1.00 35.39 O
ATOM 5 O5' U A 39 -16.441 -1.370 -12.540 1.00 30.64 O
ATOM 6 C5' U A 39 -15.024 -1.405 -12.555 1.00 32.52 C
ATOM 7 C4' U A 39 -14.524 -1.508 -11.127 1.00 34.44 C
ATOM 8 O4' U A 39 -14.577 -0.193 -10.515 1.00 33.14 O
ATOM 9 C3' U A 39 -15.353 -2.434 -10.240 1.00 36.43 C
ATOM 10 O3' U A 39 -14.519 -3.340 -9.517 1.00 40.97 O
ATOM 11 C2' U A 39 -16.099 -1.490 -9.302 1.00 37.13 C
ATOM 12 O2' U A 39 -16.270 -2.050 -8.015 1.00 41.66 O
ATOM 13 C1' U A 39 -15.160 -0.292 -9.235 1.00 32.01 C
ATOM 14 N1 U A 39 -15.863 0.982 -8.941 1.00 32.98 N
ATOM 15 C2 U A 39 -15.878 1.456 -7.647 1.00 31.71 C
ATOM 16 O2 U A 39 -15.334 0.878 -6.723 1.00 35.33 O
ATOM 17 N3 U A 39 -16.554 2.637 -7.475 1.00 31.57 N
ATOM 18 C4 U A 39 -17.205 3.371 -8.449 1.00 30.97 C
ATOM 19 O4 U A 39 -17.773 4.415 -8.148 1.00 35.02 O
ATOM 20 C5 U A 39 -17.145 2.810 -9.772 1.00 32.23 C
ATOM 21 C6 U A 39 -16.491 1.661 -9.964 1.00 30.10 C
ATOM 22 P U A 40 -14.375 -4.850 -10.026 1.00 41.85 P
ATOM 23 OP1 U A 40 -15.692 -5.290 -10.534 1.00 38.37 O
ATOM 24 OP2 U A 40 -13.693 -5.620 -8.963 1.00 49.96 O
ATOM 25 O5' U A 40 -13.394 -4.721 -11.279 1.00 39.63 O
TER
ATOM 1 O3' C B 37 -13.492 3.494 -17.892 1.00 27.67 O
ATOM 2 P U B 38 -14.210 2.076 -17.710 1.00 28.92 P
ATOM 3 OP1 U B 38 -13.225 1.133 -17.129 1.00 26.99 O
ATOM 4 OP2 U B 38 -14.897 1.754 -18.979 1.00 31.43 O
ATOM 5 O5' U B 38 -15.317 2.380 -16.599 1.00 27.06 O
ATOM 6 C5' U B 38 -14.932 2.755 -15.287 1.00 27.46 C
ATOM 7 C4' U B 38 -16.164 3.018 -14.445 1.00 28.07 C
ATOM 8 O4' U B 38 -16.896 4.129 -15.009 1.00 30.55 O
ATOM 9 C3' U B 38 -17.186 1.892 -14.430 1.00 28.87 C
ATOM 10 O3' U B 38 -16.815 0.909 -13.479 1.00 27.02 O
ATOM 11 C2' U B 38 -18.444 2.641 -13.998 1.00 31.02 C
ATOM 12 O2' U B 38 -18.508 2.843 -12.602 1.00 29.46 O
ATOM 13 C1' U B 38 -18.266 3.994 -14.678 1.00 26.11 C
ATOM 14 N1 U B 38 -19.095 4.179 -15.903 1.00 30.20 N
ATOM 15 C2 U B 38 -20.437 4.443 -15.747 1.00 26.16 C
ATOM 16 O2 U B 38 -20.970 4.521 -14.657 1.00 30.13 O
ATOM 17 N3 U B 38 -21.134 4.608 -16.914 1.00 27.53 N
ATOM 18 C4 U B 38 -20.628 4.537 -18.198 1.00 30.90 C
ATOM 19 O4 U B 38 -21.377 4.709 -19.152 1.00 32.80 O
ATOM 20 C5 U B 38 -19.215 4.261 -18.282 1.00 31.85 C
ATOM 21 C6 U B 38 -18.515 4.095 -17.152 1.00 29.40 C
ATOM 22 P U B 39 -17.253 -0.620 -13.689 1.00 31.88 P
ATOM 23 OP1 U B 39 -16.729 -1.060 -14.998 1.00 26.84 O
ATOM 24 OP2 U B 39 -18.697 -0.730 -13.386 1.00 35.39 O
ATOM 25 O5' U B 39 -16.441 -1.370 -12.540 1.00 30.64 O
TER
ATOM 2 P U A 39 -17.253 -0.620 -13.689 1.00 31.88 P
ATOM 3 OP1 U A 39 -16.729 -1.060 -14.998 1.00 26.84 O
ATOM 4 OP2 U A 39 -18.697 -0.730 -13.386 1.00 35.39 O
ATOM 5 O5' U A 39 -16.441 -1.370 -12.540 1.00 30.64 O
ATOM 6 C5' U A 39 -15.024 -1.405 -12.555 1.00 32.52 C
ATOM 7 C4' U A 39 -14.524 -1.508 -11.127 1.00 34.44 C
ATOM 8 O4' U A 39 -14.577 -0.193 -10.515 1.00 33.14 O
ATOM 9 C3' U A 39 -15.353 -2.434 -10.240 1.00 36.43 C
ATOM 10 O3' U A 39 -14.519 -3.340 -9.517 1.00 40.97 O
ATOM 11 C2' U A 39 -16.099 -1.490 -9.302 1.00 37.13 C
ATOM 12 O2' U A 39 -16.270 -2.050 -8.015 1.00 41.66 O
ATOM 13 C1' U A 39 -15.160 -0.292 -9.235 1.00 32.01 C
ATOM 14 N1 U A 39 -15.863 0.982 -8.941 1.00 32.98 N
ATOM 15 C2 U A 39 -15.878 1.456 -7.647 1.00 31.71 C
ATOM 16 O2 U A 39 -15.334 0.878 -6.723 1.00 35.33 O
ATOM 17 N3 U A 39 -16.554 2.637 -7.475 1.00 31.57 N
ATOM 18 C4 U A 39 -17.205 3.371 -8.449 1.00 30.97 C
ATOM 19 O4 U A 39 -17.773 4.415 -8.148 1.00 35.02 O
ATOM 20 C5 U A 39 -17.145 2.810 -9.772 1.00 32.23 C
ATOM 21 C6 U A 39 -16.491 1.661 -9.964 1.00 30.10 C
ATOM 22 P U A 40 -14.375 -4.850 -10.026 1.00 41.85 P
ATOM 23 OP1 U A 40 -15.692 -5.290 -10.534 1.00 38.37 O
ATOM 24 OP2 U A 40 -13.693 -5.620 -8.963 1.00 49.96 O
ATOM 25 O5' U A 40 -13.394 -4.721 -11.279 1.00 39.63 O
TER
ATOM 1 O3' C B 37 -13.492 3.494 -17.892 1.00 27.67 O
ATOM 2 P U B 38 -14.210 2.076 -17.710 1.00 28.92 P
ATOM 3 OP1 U B 38 -13.225 1.133 -17.129 1.00 26.99 O
ATOM 4 OP2 U B 38 -14.897 1.754 -18.979 1.00 31.43 O
ATOM 5 O5' U B 38 -15.317 2.380 -16.599 1.00 27.06 O
ATOM 6 C5' U B 38 -14.932 2.755 -15.287 1.00 27.46 C
ATOM 7 C4' U B 38 -16.164 3.018 -14.445 1.00 28.07 C
ATOM 8 O4' U B 38 -16.896 4.129 -15.009 1.00 30.55 O
ATOM 9 C3' U B 38 -17.186 1.892 -14.430 1.00 28.87 C
ATOM 10 O3' U B 38 -16.815 0.909 -13.479 1.00 27.02 O
ATOM 11 C2' U B 38 -18.444 2.641 -13.998 1.00 31.02 C
ATOM 12 O2' U B 38 -18.508 2.843 -12.602 1.00 29.46 O
ATOM 13 C1' U B 38 -18.266 3.994 -14.678 1.00 26.11 C
ATOM 14 N1 U B 38 -19.095 4.179 -15.903 1.00 30.20 N
ATOM 15 C2 U B 38 -20.437 4.443 -15.747 1.00 26.16 C
ATOM 16 O2 U B 38 -20.970 4.521 -14.657 1.00 30.13 O
ATOM 17 N3 U B 38 -21.134 4.608 -16.914 1.00 27.53 N
ATOM 18 C4 U B 38 -20.628 4.537 -18.198 1.00 30.90 C
ATOM 19 O4 U B 38 -21.377 4.709 -19.152 1.00 32.80 O
ATOM 20 C5 U B 38 -19.215 4.261 -18.282 1.00 31.85 C
ATOM 21 C6 U B 38 -18.515 4.095 -17.152 1.00 29.40 C
ATOM 22 P U B 39 -17.253 -0.620 -13.689 1.00 31.88 P
ATOM 23 OP1 U B 39 -16.729 -1.060 -14.998 1.00 26.84 O
ATOM 24 OP2 U B 39 -18.697 -0.730 -13.386 1.00 35.39 O
ATOM 25 O5' U B 39 -16.441 -1.370 -12.540 1.00 30.64 O
TER
Atoms:
C4: (-17.205,3.371,-8.449)
N3: (-16.554,2.637,-7.475)
OP1: (-16.729,-1.060,-14.998)
OP2: (-18.697,-0.730,-13.386)
C2: (-15.878,1.456,-7.647)
C1': (-15.160,-0.292,-9.235)
C3': (-15.353,-2.434,-10.240)
O5': (-16.441,-1.370,-12.540)
O4': (-14.577,-0.193,-10.515)
C5': (-15.024,-1.405,-12.555)
P: (-17.253,-0.620,-13.689)
C4': (-14.524,-1.508,-11.127)
C2': (-16.099,-1.490,-9.302)
O2': (-16.270,-2.050,-8.015)
N1: (-15.863,0.982,-8.941)
O4: (-17.773,4.415,-8.148)
O2: (-15.334,0.878,-6.723)
C6: (-16.491,1.661,-9.964)
C5: (-17.145,2.810,-9.772)
O3': (-14.519,-3.340,-9.517)
N3: (-16.554,2.637,-7.475)
OP1: (-16.729,-1.060,-14.998)
OP2: (-18.697,-0.730,-13.386)
C2: (-15.878,1.456,-7.647)
C1': (-15.160,-0.292,-9.235)
C3': (-15.353,-2.434,-10.240)
O5': (-16.441,-1.370,-12.540)
O4': (-14.577,-0.193,-10.515)
C5': (-15.024,-1.405,-12.555)
P: (-17.253,-0.620,-13.689)
C4': (-14.524,-1.508,-11.127)
C2': (-16.099,-1.490,-9.302)
O2': (-16.270,-2.050,-8.015)
N1: (-15.863,0.982,-8.941)
O4: (-17.773,4.415,-8.148)
O2: (-15.334,0.878,-6.723)
C6: (-16.491,1.661,-9.964)
C5: (-17.145,2.810,-9.772)
O3': (-14.519,-3.340,-9.517)
C4: (-20.628,4.537,-18.198)
N3: (-21.134,4.608,-16.914)
OP1: (-13.225,1.133,-17.129)
OP2: (-14.897,1.754,-18.979)
C2: (-20.437,4.443,-15.747)
C1': (-18.266,3.994,-14.678)
C3': (-17.186,1.892,-14.430)
O5': (-15.317,2.380,-16.599)
O4': (-16.896,4.129,-15.009)
C5': (-14.932,2.755,-15.287)
P: (-14.210,2.076,-17.710)
C4': (-16.164,3.018,-14.445)
C2': (-18.444,2.641,-13.998)
O2': (-18.508,2.843,-12.602)
N1: (-19.095,4.179,-15.903)
O4: (-21.377,4.709,-19.152)
O2: (-20.970,4.521,-14.657)
C6: (-18.515,4.095,-17.152)
C5: (-19.215,4.261,-18.282)
O3': (-16.815,0.909,-13.479)
N3: (-21.134,4.608,-16.914)
OP1: (-13.225,1.133,-17.129)
OP2: (-14.897,1.754,-18.979)
C2: (-20.437,4.443,-15.747)
C1': (-18.266,3.994,-14.678)
C3': (-17.186,1.892,-14.430)
O5': (-15.317,2.380,-16.599)
O4': (-16.896,4.129,-15.009)
C5': (-14.932,2.755,-15.287)
P: (-14.210,2.076,-17.710)
C4': (-16.164,3.018,-14.445)
C2': (-18.444,2.641,-13.998)
O2': (-18.508,2.843,-12.602)
N1: (-19.095,4.179,-15.903)
O4: (-21.377,4.709,-19.152)
O2: (-20.970,4.521,-14.657)
C6: (-18.515,4.095,-17.152)
C5: (-19.215,4.261,-18.282)
O3': (-16.815,0.909,-13.479)
Image (generated by PyMOL):