ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1L8V:B120:B49

Extra

PDB:
ATOM 1 O3' C A 119 -10.415 -70.733 53.218 1.00 95.33 O
ATOM 2 P U A 120 -9.192 -71.215 52.291 1.00 96.41 P
ATOM 3 OP1 U A 120 -8.616 -72.479 52.806 1.00 94.19 O
ATOM 4 OP2 U A 120 -8.324 -70.019 52.133 1.00 95.92 O
ATOM 5 O5' U A 120 -9.886 -71.541 50.894 1.00 97.79 O
ATOM 6 C5' U A 120 -10.960 -72.467 50.815 1.00 99.76 C
ATOM 7 C4' U A 120 -11.650 -72.369 49.474 1.00100.83 C
ATOM 8 O4' U A 120 -12.339 -71.094 49.362 1.00101.76 O
ATOM 9 C3' U A 120 -10.719 -72.382 48.274 1.00101.21 C
ATOM 10 O3' U A 120 -10.380 -73.715 47.914 1.00102.16 O
ATOM 11 C2' U A 120 -11.566 -71.711 47.203 1.00101.03 C
ATOM 12 O2' U A 120 -12.519 -72.589 46.649 1.00100.17 O
ATOM 13 C1' U A 120 -12.299 -70.652 48.012 1.00102.16 C
ATOM 14 N1 U A 120 -11.625 -69.354 47.935 1.00103.49 N
ATOM 15 C2 U A 120 -11.817 -68.635 46.789 1.00103.97 C
ATOM 16 O2 U A 120 -12.539 -69.027 45.895 1.00103.41 O
ATOM 17 N3 U A 120 -11.142 -67.438 46.729 1.00104.85 N
ATOM 18 C4 U A 120 -10.316 -66.901 47.696 1.00104.87 C
ATOM 19 O4 U A 120 -9.757 -65.818 47.498 1.00104.43 O
ATOM 20 C5 U A 120 -10.188 -67.707 48.865 1.00105.36 C
ATOM 21 C6 U A 120 -10.831 -68.879 48.942 1.00104.20 C
ATOM 22 P A A 121 -9.032 -73.999 47.090 1.00103.98 P
ATOM 23 OP1 A A 121 -8.989 -75.438 46.730 1.00100.87 O
ATOM 24 OP2 A A 121 -7.889 -73.375 47.807 1.00102.89 O
ATOM 25 O5' A A 121 -9.218 -73.145 45.767 1.00104.72 O
TER

ATOM 1 O3' A B 48 -15.706 -79.004 42.676 1.00104.69 O
ATOM 2 P A B 49 -16.743 -79.198 43.884 1.00103.97 P
ATOM 3 OP1 A B 49 -16.674 -80.608 44.361 1.00102.43 O
ATOM 4 OP2 A B 49 -18.055 -78.636 43.435 1.00104.03 O
ATOM 5 O5' A B 49 -16.119 -78.288 45.034 1.00102.83 O
ATOM 6 C5' A B 49 -14.904 -78.677 45.674 1.00100.73 C
ATOM 7 C4' A B 49 -14.159 -77.464 46.162 1.00 99.36 C
ATOM 8 O4' A B 49 -14.009 -76.548 45.053 1.00 98.49 O
ATOM 9 C3' A B 49 -14.839 -76.658 47.253 1.00 99.09 C
ATOM 10 O3' A B 49 -14.489 -77.218 48.524 1.00 98.52 O
ATOM 11 C2' A B 49 -14.223 -75.277 47.041 1.00 98.92 C
ATOM 12 O2' A B 49 -12.914 -75.184 47.572 1.00100.24 O
ATOM 13 C1' A B 49 -14.118 -75.220 45.515 1.00 97.02 C
ATOM 14 N9 A B 49 -15.246 -74.606 44.818 1.00 93.48 N
ATOM 15 C8 A B 49 -16.338 -75.233 44.267 1.00 92.32 C
ATOM 16 N7 A B 49 -17.176 -74.412 43.678 1.00 91.71 N
ATOM 17 C5 A B 49 -16.598 -73.161 43.857 1.00 91.08 C
ATOM 18 C6 A B 49 -16.994 -71.869 43.467 1.00 89.91 C
ATOM 19 N6 A B 49 -18.104 -71.604 42.788 1.00 87.49 N
ATOM 20 N1 A B 49 -16.194 -70.840 43.808 1.00 90.35 N
ATOM 21 C2 A B 49 -15.076 -71.101 44.491 1.00 91.56 C
ATOM 22 N3 A B 49 -14.597 -72.269 44.913 1.00 91.69 N
ATOM 23 C4 A B 49 -15.413 -73.267 44.561 1.00 91.81 C
ATOM 24 P A B 50 -15.551 -77.202 49.738 1.00 99.32 P
ATOM 25 OP1 A B 50 -14.982 -77.967 50.876 1.00 97.67 O
ATOM 26 OP2 A B 50 -16.892 -77.581 49.202 1.00100.47 O
ATOM 27 O5' A B 50 -15.622 -75.661 50.157 1.00 98.35 O
TER

Atoms:
C4: (-10.316,-66.901,47.696)
N3: (-11.142,-67.438,46.729)
OP1: (-8.616,-72.479,52.806)
OP2: (-8.324,-70.019,52.133)
C2: (-11.817,-68.635,46.789)
C1': (-12.299,-70.652,48.012)
C3': (-10.719,-72.382,48.274)
O5': (-9.886,-71.541,50.894)
O4': (-12.339,-71.094,49.362)
C5': (-10.960,-72.467,50.815)
P: (-9.192,-71.215,52.291)
C4': (-11.650,-72.369,49.474)
C2': (-11.566,-71.711,47.203)
O2': (-12.519,-72.589,46.649)
N1: (-11.625,-69.354,47.935)
O4: (-9.757,-65.818,47.498)
O2: (-12.539,-69.027,45.895)
C6: (-10.831,-68.879,48.942)
C5: (-10.188,-67.707,48.865)
O3': (-10.380,-73.715,47.914)
OP1: (-16.674,-80.608,44.361)
OP2: (-18.055,-78.636,43.435)
C3': (-14.839,-76.658,47.253)
C1': (-14.118,-75.220,45.515)
C5': (-14.904,-78.677,45.674)
O4': (-14.009,-76.548,45.053)
C8: (-16.338,-75.233,44.267)
O2': (-12.914,-75.184,47.572)
C6: (-16.994,-71.869,43.467)
C5: (-16.598,-73.161,43.857)
C4: (-15.413,-73.267,44.561)
P: (-16.743,-79.198,43.884)
C4': (-14.159,-77.464,46.162)
C2': (-14.223,-75.277,47.041)
C2: (-15.076,-71.101,44.491)
N1: (-16.194,-70.840,43.808)
N3: (-14.597,-72.269,44.913)
N6: (-18.104,-71.604,42.788)
N7: (-17.176,-74.412,43.678)
N9: (-15.246,-74.606,44.818)
O5': (-16.119,-78.288,45.034)
O3': (-14.489,-77.218,48.524)
Image (generated by PyMOL):
PyMOL image
show in jmol