Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:A39:A38
Extra
PDB:
ATOM 1 O3' U A 38 -17.258 -54.692 14.250 1.00 28.10 O
ATOM 2 P U A 39 -17.436 -56.250 13.895 1.00 28.86 P
ATOM 3 OP1 U A 39 -16.729 -56.522 12.612 1.00 27.89 O
ATOM 4 OP2 U A 39 -18.871 -56.580 14.021 1.00 28.44 O
ATOM 5 O5' U A 39 -16.658 -56.974 15.076 1.00 28.59 O
ATOM 6 C5' U A 39 -15.229 -57.094 15.035 1.00 29.67 C
ATOM 7 C4' U A 39 -14.667 -57.206 16.430 1.00 30.59 C
ATOM 8 O4' U A 39 -14.609 -55.903 17.074 1.00 31.05 O
ATOM 9 C3' U A 39 -15.413 -58.132 17.375 1.00 31.49 C
ATOM 10 O3' U A 39 -14.482 -58.933 18.074 1.00 31.74 O
ATOM 11 C2' U A 39 -16.141 -57.171 18.312 1.00 31.12 C
ATOM 12 O2' U A 39 -16.357 -57.713 19.597 1.00 31.77 O
ATOM 13 C1' U A 39 -15.176 -55.986 18.363 1.00 30.54 C
ATOM 14 N1 U A 39 -15.833 -54.707 18.670 1.00 30.18 N
ATOM 15 C2 U A 39 -15.817 -54.265 19.986 1.00 29.55 C
ATOM 16 O2 U A 39 -15.225 -54.844 20.877 1.00 31.40 O
ATOM 17 N3 U A 39 -16.514 -53.112 20.218 1.00 28.79 N
ATOM 18 C4 U A 39 -17.199 -52.360 19.299 1.00 28.61 C
ATOM 19 O4 U A 39 -17.898 -51.425 19.690 1.00 29.38 O
ATOM 20 C5 U A 39 -17.128 -52.848 17.958 1.00 29.43 C
ATOM 21 C6 U A 39 -16.465 -53.978 17.696 1.00 29.94 C
ATOM 22 P U A 40 -14.334 -60.474 17.677 1.00 33.13 P
ATOM 23 OP1 U A 40 -15.662 -60.969 17.230 1.00 33.36 O
ATOM 24 OP2 U A 40 -13.644 -61.143 18.801 1.00 34.49 O
ATOM 25 O5' U A 40 -13.370 -60.463 16.411 1.00 32.16 O
TER
ATOM 1 O3' C B 37 -13.855 -52.079 9.670 1.00 26.42 O
ATOM 2 P U B 38 -14.680 -53.443 9.852 1.00 26.01 P
ATOM 3 OP1 U B 38 -13.740 -54.461 10.365 1.00 26.60 O
ATOM 4 OP2 U B 38 -15.447 -53.711 8.601 1.00 25.91 O
ATOM 5 O5' U B 38 -15.744 -53.110 10.989 1.00 25.56 O
ATOM 6 C5' U B 38 -15.331 -52.874 12.344 1.00 25.83 C
ATOM 7 C4' U B 38 -16.534 -52.621 13.229 1.00 25.39 C
ATOM 8 O4' U B 38 -17.249 -51.450 12.770 1.00 25.50 O
ATOM 9 C3' U B 38 -17.596 -53.707 13.289 1.00 25.84 C
ATOM 10 O3' U B 38 -17.258 -54.692 14.250 1.00 28.10 O
ATOM 11 C2' U B 38 -18.825 -52.938 13.748 1.00 25.20 C
ATOM 12 O2' U B 38 -18.802 -52.727 15.143 1.00 23.92 O
ATOM 13 C1' U B 38 -18.630 -51.591 13.056 1.00 24.12 C
ATOM 14 N1 U B 38 -19.400 -51.455 11.809 1.00 21.45 N
ATOM 15 C2 U B 38 -20.742 -51.126 11.917 1.00 20.65 C
ATOM 16 O2 U B 38 -21.299 -50.971 12.977 1.00 21.12 O
ATOM 17 N3 U B 38 -21.406 -50.987 10.729 1.00 18.89 N
ATOM 18 C4 U B 38 -20.879 -51.142 9.469 1.00 20.67 C
ATOM 19 O4 U B 38 -21.593 -50.931 8.489 1.00 22.43 O
ATOM 20 C5 U B 38 -19.490 -51.495 9.436 1.00 20.06 C
ATOM 21 C6 U B 38 -18.819 -51.637 10.579 1.00 20.80 C
ATOM 22 P U B 39 -17.436 -56.250 13.895 1.00 28.86 P
ATOM 23 OP1 U B 39 -16.729 -56.522 12.612 1.00 27.89 O
ATOM 24 OP2 U B 39 -18.871 -56.580 14.021 1.00 28.44 O
ATOM 25 O5' U B 39 -16.658 -56.974 15.076 1.00 28.59 O
TER
ATOM 2 P U A 39 -17.436 -56.250 13.895 1.00 28.86 P
ATOM 3 OP1 U A 39 -16.729 -56.522 12.612 1.00 27.89 O
ATOM 4 OP2 U A 39 -18.871 -56.580 14.021 1.00 28.44 O
ATOM 5 O5' U A 39 -16.658 -56.974 15.076 1.00 28.59 O
ATOM 6 C5' U A 39 -15.229 -57.094 15.035 1.00 29.67 C
ATOM 7 C4' U A 39 -14.667 -57.206 16.430 1.00 30.59 C
ATOM 8 O4' U A 39 -14.609 -55.903 17.074 1.00 31.05 O
ATOM 9 C3' U A 39 -15.413 -58.132 17.375 1.00 31.49 C
ATOM 10 O3' U A 39 -14.482 -58.933 18.074 1.00 31.74 O
ATOM 11 C2' U A 39 -16.141 -57.171 18.312 1.00 31.12 C
ATOM 12 O2' U A 39 -16.357 -57.713 19.597 1.00 31.77 O
ATOM 13 C1' U A 39 -15.176 -55.986 18.363 1.00 30.54 C
ATOM 14 N1 U A 39 -15.833 -54.707 18.670 1.00 30.18 N
ATOM 15 C2 U A 39 -15.817 -54.265 19.986 1.00 29.55 C
ATOM 16 O2 U A 39 -15.225 -54.844 20.877 1.00 31.40 O
ATOM 17 N3 U A 39 -16.514 -53.112 20.218 1.00 28.79 N
ATOM 18 C4 U A 39 -17.199 -52.360 19.299 1.00 28.61 C
ATOM 19 O4 U A 39 -17.898 -51.425 19.690 1.00 29.38 O
ATOM 20 C5 U A 39 -17.128 -52.848 17.958 1.00 29.43 C
ATOM 21 C6 U A 39 -16.465 -53.978 17.696 1.00 29.94 C
ATOM 22 P U A 40 -14.334 -60.474 17.677 1.00 33.13 P
ATOM 23 OP1 U A 40 -15.662 -60.969 17.230 1.00 33.36 O
ATOM 24 OP2 U A 40 -13.644 -61.143 18.801 1.00 34.49 O
ATOM 25 O5' U A 40 -13.370 -60.463 16.411 1.00 32.16 O
TER
ATOM 1 O3' C B 37 -13.855 -52.079 9.670 1.00 26.42 O
ATOM 2 P U B 38 -14.680 -53.443 9.852 1.00 26.01 P
ATOM 3 OP1 U B 38 -13.740 -54.461 10.365 1.00 26.60 O
ATOM 4 OP2 U B 38 -15.447 -53.711 8.601 1.00 25.91 O
ATOM 5 O5' U B 38 -15.744 -53.110 10.989 1.00 25.56 O
ATOM 6 C5' U B 38 -15.331 -52.874 12.344 1.00 25.83 C
ATOM 7 C4' U B 38 -16.534 -52.621 13.229 1.00 25.39 C
ATOM 8 O4' U B 38 -17.249 -51.450 12.770 1.00 25.50 O
ATOM 9 C3' U B 38 -17.596 -53.707 13.289 1.00 25.84 C
ATOM 10 O3' U B 38 -17.258 -54.692 14.250 1.00 28.10 O
ATOM 11 C2' U B 38 -18.825 -52.938 13.748 1.00 25.20 C
ATOM 12 O2' U B 38 -18.802 -52.727 15.143 1.00 23.92 O
ATOM 13 C1' U B 38 -18.630 -51.591 13.056 1.00 24.12 C
ATOM 14 N1 U B 38 -19.400 -51.455 11.809 1.00 21.45 N
ATOM 15 C2 U B 38 -20.742 -51.126 11.917 1.00 20.65 C
ATOM 16 O2 U B 38 -21.299 -50.971 12.977 1.00 21.12 O
ATOM 17 N3 U B 38 -21.406 -50.987 10.729 1.00 18.89 N
ATOM 18 C4 U B 38 -20.879 -51.142 9.469 1.00 20.67 C
ATOM 19 O4 U B 38 -21.593 -50.931 8.489 1.00 22.43 O
ATOM 20 C5 U B 38 -19.490 -51.495 9.436 1.00 20.06 C
ATOM 21 C6 U B 38 -18.819 -51.637 10.579 1.00 20.80 C
ATOM 22 P U B 39 -17.436 -56.250 13.895 1.00 28.86 P
ATOM 23 OP1 U B 39 -16.729 -56.522 12.612 1.00 27.89 O
ATOM 24 OP2 U B 39 -18.871 -56.580 14.021 1.00 28.44 O
ATOM 25 O5' U B 39 -16.658 -56.974 15.076 1.00 28.59 O
TER
Atoms:
C4: (-17.199,-52.360,19.299)
N3: (-16.514,-53.112,20.218)
OP1: (-16.729,-56.522,12.612)
OP2: (-18.871,-56.580,14.021)
C2: (-15.817,-54.265,19.986)
C1': (-15.176,-55.986,18.363)
C3': (-15.413,-58.132,17.375)
O5': (-16.658,-56.974,15.076)
O4': (-14.609,-55.903,17.074)
C5': (-15.229,-57.094,15.035)
P: (-17.436,-56.250,13.895)
C4': (-14.667,-57.206,16.430)
C2': (-16.141,-57.171,18.312)
O2': (-16.357,-57.713,19.597)
N1: (-15.833,-54.707,18.670)
O4: (-17.898,-51.425,19.690)
O2: (-15.225,-54.844,20.877)
C6: (-16.465,-53.978,17.696)
C5: (-17.128,-52.848,17.958)
O3': (-14.482,-58.933,18.074)
N3: (-16.514,-53.112,20.218)
OP1: (-16.729,-56.522,12.612)
OP2: (-18.871,-56.580,14.021)
C2: (-15.817,-54.265,19.986)
C1': (-15.176,-55.986,18.363)
C3': (-15.413,-58.132,17.375)
O5': (-16.658,-56.974,15.076)
O4': (-14.609,-55.903,17.074)
C5': (-15.229,-57.094,15.035)
P: (-17.436,-56.250,13.895)
C4': (-14.667,-57.206,16.430)
C2': (-16.141,-57.171,18.312)
O2': (-16.357,-57.713,19.597)
N1: (-15.833,-54.707,18.670)
O4: (-17.898,-51.425,19.690)
O2: (-15.225,-54.844,20.877)
C6: (-16.465,-53.978,17.696)
C5: (-17.128,-52.848,17.958)
O3': (-14.482,-58.933,18.074)
C4: (-20.879,-51.142,9.469)
N3: (-21.406,-50.987,10.729)
OP1: (-13.740,-54.461,10.365)
OP2: (-15.447,-53.711,8.601)
C2: (-20.742,-51.126,11.917)
C1': (-18.630,-51.591,13.056)
C3': (-17.596,-53.707,13.289)
O5': (-15.744,-53.110,10.989)
O4': (-17.249,-51.450,12.770)
C5': (-15.331,-52.874,12.344)
P: (-14.680,-53.443,9.852)
C4': (-16.534,-52.621,13.229)
C2': (-18.825,-52.938,13.748)
O2': (-18.802,-52.727,15.143)
N1: (-19.400,-51.455,11.809)
O4: (-21.593,-50.931,8.489)
O2: (-21.299,-50.971,12.977)
C6: (-18.819,-51.637,10.579)
C5: (-19.490,-51.495,9.436)
O3': (-17.258,-54.692,14.250)
N3: (-21.406,-50.987,10.729)
OP1: (-13.740,-54.461,10.365)
OP2: (-15.447,-53.711,8.601)
C2: (-20.742,-51.126,11.917)
C1': (-18.630,-51.591,13.056)
C3': (-17.596,-53.707,13.289)
O5': (-15.744,-53.110,10.989)
O4': (-17.249,-51.450,12.770)
C5': (-15.331,-52.874,12.344)
P: (-14.680,-53.443,9.852)
C4': (-16.534,-52.621,13.229)
C2': (-18.825,-52.938,13.748)
O2': (-18.802,-52.727,15.143)
N1: (-19.400,-51.455,11.809)
O4: (-21.593,-50.931,8.489)
O2: (-21.299,-50.971,12.977)
C6: (-18.819,-51.637,10.579)
C5: (-19.490,-51.495,9.436)
O3': (-17.258,-54.692,14.250)
Image (generated by PyMOL):