Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:B39:B38
Extra
PDB:
ATOM 1 O3' U A 38 -18.683 -1.424 13.642 1.00 39.65 O
ATOM 2 P U A 39 -18.722 0.152 13.927 1.00 41.34 P
ATOM 3 OP1 U A 39 -17.976 0.405 15.195 1.00 40.52 O
ATOM 4 OP2 U A 39 -20.145 0.569 13.814 1.00 41.49 O
ATOM 5 O5' U A 39 -17.904 0.772 12.704 1.00 41.43 O
ATOM 6 C5' U A 39 -16.484 0.981 12.808 1.00 42.53 C
ATOM 7 C4' U A 39 -15.814 0.808 11.463 1.00 43.74 C
ATOM 8 O4' U A 39 -15.969 -0.561 10.999 1.00 43.56 O
ATOM 9 C3' U A 39 -16.304 1.706 10.329 1.00 44.80 C
ATOM 10 O3' U A 39 -15.176 2.104 9.548 1.00 46.67 O
ATOM 11 C2' U A 39 -17.166 0.758 9.499 1.00 44.20 C
ATOM 12 O2' U A 39 -17.292 1.100 8.131 1.00 44.34 O
ATOM 13 C1' U A 39 -16.385 -0.540 9.654 1.00 43.47 C
ATOM 14 N1 U A 39 -17.116 -1.772 9.323 1.00 42.55 N
ATOM 15 C2 U A 39 -16.973 -2.247 8.032 1.00 42.30 C
ATOM 16 O2 U A 39 -16.271 -1.702 7.196 1.00 42.67 O
ATOM 17 N3 U A 39 -17.673 -3.387 7.749 1.00 42.45 N
ATOM 18 C4 U A 39 -18.474 -4.098 8.605 1.00 43.42 C
ATOM 19 O4 U A 39 -18.994 -5.144 8.209 1.00 45.05 O
ATOM 20 C5 U A 39 -18.574 -3.548 9.929 1.00 42.80 C
ATOM 21 C6 U A 39 -17.908 -2.431 10.233 1.00 42.24 C
ATOM 22 P U A 40 -14.798 3.659 9.424 1.00 48.58 P
ATOM 23 OP1 U A 40 -16.060 4.439 9.336 1.00 48.83 O
ATOM 24 OP2 U A 40 -13.788 3.768 8.344 1.00 48.39 O
ATOM 25 O5' U A 40 -14.093 4.011 10.808 1.00 49.90 O
TER
ATOM 1 O3' C B 37 -15.760 -3.776 18.628 1.00 31.61 O
ATOM 2 P U B 38 -16.515 -2.409 18.253 1.00 31.80 P
ATOM 3 OP1 U B 38 -15.535 -1.442 17.718 1.00 31.96 O
ATOM 4 OP2 U B 38 -17.359 -2.035 19.411 1.00 32.91 O
ATOM 5 O5' U B 38 -17.481 -2.820 17.064 1.00 32.86 O
ATOM 6 C5' U B 38 -16.954 -3.126 15.773 1.00 34.58 C
ATOM 7 C4' U B 38 -18.075 -3.435 14.822 1.00 36.26 C
ATOM 8 O4' U B 38 -18.831 -4.560 15.325 1.00 36.37 O
ATOM 9 C3' U B 38 -19.105 -2.332 14.646 1.00 37.57 C
ATOM 10 O3' U B 38 -18.683 -1.424 13.642 1.00 39.65 O
ATOM 11 C2' U B 38 -20.348 -3.095 14.201 1.00 37.43 C
ATOM 12 O2' U B 38 -20.358 -3.343 12.811 1.00 38.08 O
ATOM 13 C1' U B 38 -20.186 -4.424 14.938 1.00 36.57 C
ATOM 14 N1 U B 38 -21.054 -4.591 16.115 1.00 36.11 N
ATOM 15 C2 U B 38 -22.386 -4.911 15.880 1.00 35.67 C
ATOM 16 O2 U B 38 -22.854 -5.023 14.752 1.00 36.24 O
ATOM 17 N3 U B 38 -23.146 -5.099 17.010 1.00 33.03 N
ATOM 18 C4 U B 38 -22.727 -5.002 18.320 1.00 33.27 C
ATOM 19 O4 U B 38 -23.519 -5.273 19.230 1.00 32.74 O
ATOM 20 C5 U B 38 -21.345 -4.645 18.482 1.00 33.52 C
ATOM 21 C6 U B 38 -20.576 -4.456 17.402 1.00 34.90 C
ATOM 22 P U B 39 -18.722 0.152 13.927 1.00 41.34 P
ATOM 23 OP1 U B 39 -17.976 0.405 15.195 1.00 40.52 O
ATOM 24 OP2 U B 39 -20.145 0.569 13.814 1.00 41.49 O
ATOM 25 O5' U B 39 -17.904 0.772 12.704 1.00 41.43 O
TER
ATOM 2 P U A 39 -18.722 0.152 13.927 1.00 41.34 P
ATOM 3 OP1 U A 39 -17.976 0.405 15.195 1.00 40.52 O
ATOM 4 OP2 U A 39 -20.145 0.569 13.814 1.00 41.49 O
ATOM 5 O5' U A 39 -17.904 0.772 12.704 1.00 41.43 O
ATOM 6 C5' U A 39 -16.484 0.981 12.808 1.00 42.53 C
ATOM 7 C4' U A 39 -15.814 0.808 11.463 1.00 43.74 C
ATOM 8 O4' U A 39 -15.969 -0.561 10.999 1.00 43.56 O
ATOM 9 C3' U A 39 -16.304 1.706 10.329 1.00 44.80 C
ATOM 10 O3' U A 39 -15.176 2.104 9.548 1.00 46.67 O
ATOM 11 C2' U A 39 -17.166 0.758 9.499 1.00 44.20 C
ATOM 12 O2' U A 39 -17.292 1.100 8.131 1.00 44.34 O
ATOM 13 C1' U A 39 -16.385 -0.540 9.654 1.00 43.47 C
ATOM 14 N1 U A 39 -17.116 -1.772 9.323 1.00 42.55 N
ATOM 15 C2 U A 39 -16.973 -2.247 8.032 1.00 42.30 C
ATOM 16 O2 U A 39 -16.271 -1.702 7.196 1.00 42.67 O
ATOM 17 N3 U A 39 -17.673 -3.387 7.749 1.00 42.45 N
ATOM 18 C4 U A 39 -18.474 -4.098 8.605 1.00 43.42 C
ATOM 19 O4 U A 39 -18.994 -5.144 8.209 1.00 45.05 O
ATOM 20 C5 U A 39 -18.574 -3.548 9.929 1.00 42.80 C
ATOM 21 C6 U A 39 -17.908 -2.431 10.233 1.00 42.24 C
ATOM 22 P U A 40 -14.798 3.659 9.424 1.00 48.58 P
ATOM 23 OP1 U A 40 -16.060 4.439 9.336 1.00 48.83 O
ATOM 24 OP2 U A 40 -13.788 3.768 8.344 1.00 48.39 O
ATOM 25 O5' U A 40 -14.093 4.011 10.808 1.00 49.90 O
TER
ATOM 1 O3' C B 37 -15.760 -3.776 18.628 1.00 31.61 O
ATOM 2 P U B 38 -16.515 -2.409 18.253 1.00 31.80 P
ATOM 3 OP1 U B 38 -15.535 -1.442 17.718 1.00 31.96 O
ATOM 4 OP2 U B 38 -17.359 -2.035 19.411 1.00 32.91 O
ATOM 5 O5' U B 38 -17.481 -2.820 17.064 1.00 32.86 O
ATOM 6 C5' U B 38 -16.954 -3.126 15.773 1.00 34.58 C
ATOM 7 C4' U B 38 -18.075 -3.435 14.822 1.00 36.26 C
ATOM 8 O4' U B 38 -18.831 -4.560 15.325 1.00 36.37 O
ATOM 9 C3' U B 38 -19.105 -2.332 14.646 1.00 37.57 C
ATOM 10 O3' U B 38 -18.683 -1.424 13.642 1.00 39.65 O
ATOM 11 C2' U B 38 -20.348 -3.095 14.201 1.00 37.43 C
ATOM 12 O2' U B 38 -20.358 -3.343 12.811 1.00 38.08 O
ATOM 13 C1' U B 38 -20.186 -4.424 14.938 1.00 36.57 C
ATOM 14 N1 U B 38 -21.054 -4.591 16.115 1.00 36.11 N
ATOM 15 C2 U B 38 -22.386 -4.911 15.880 1.00 35.67 C
ATOM 16 O2 U B 38 -22.854 -5.023 14.752 1.00 36.24 O
ATOM 17 N3 U B 38 -23.146 -5.099 17.010 1.00 33.03 N
ATOM 18 C4 U B 38 -22.727 -5.002 18.320 1.00 33.27 C
ATOM 19 O4 U B 38 -23.519 -5.273 19.230 1.00 32.74 O
ATOM 20 C5 U B 38 -21.345 -4.645 18.482 1.00 33.52 C
ATOM 21 C6 U B 38 -20.576 -4.456 17.402 1.00 34.90 C
ATOM 22 P U B 39 -18.722 0.152 13.927 1.00 41.34 P
ATOM 23 OP1 U B 39 -17.976 0.405 15.195 1.00 40.52 O
ATOM 24 OP2 U B 39 -20.145 0.569 13.814 1.00 41.49 O
ATOM 25 O5' U B 39 -17.904 0.772 12.704 1.00 41.43 O
TER
Atoms:
C4: (-18.474,-4.098,8.605)
N3: (-17.673,-3.387,7.749)
OP1: (-17.976,0.405,15.195)
OP2: (-20.145,0.569,13.814)
C2: (-16.973,-2.247,8.032)
C1': (-16.385,-0.540,9.654)
C3': (-16.304,1.706,10.329)
O5': (-17.904,0.772,12.704)
O4': (-15.969,-0.561,10.999)
C5': (-16.484,0.981,12.808)
P: (-18.722,0.152,13.927)
C4': (-15.814,0.808,11.463)
C2': (-17.166,0.758,9.499)
O2': (-17.292,1.100,8.131)
N1: (-17.116,-1.772,9.323)
O4: (-18.994,-5.144,8.209)
O2: (-16.271,-1.702,7.196)
C6: (-17.908,-2.431,10.233)
C5: (-18.574,-3.548,9.929)
O3': (-15.176,2.104,9.548)
N3: (-17.673,-3.387,7.749)
OP1: (-17.976,0.405,15.195)
OP2: (-20.145,0.569,13.814)
C2: (-16.973,-2.247,8.032)
C1': (-16.385,-0.540,9.654)
C3': (-16.304,1.706,10.329)
O5': (-17.904,0.772,12.704)
O4': (-15.969,-0.561,10.999)
C5': (-16.484,0.981,12.808)
P: (-18.722,0.152,13.927)
C4': (-15.814,0.808,11.463)
C2': (-17.166,0.758,9.499)
O2': (-17.292,1.100,8.131)
N1: (-17.116,-1.772,9.323)
O4: (-18.994,-5.144,8.209)
O2: (-16.271,-1.702,7.196)
C6: (-17.908,-2.431,10.233)
C5: (-18.574,-3.548,9.929)
O3': (-15.176,2.104,9.548)
C4: (-22.727,-5.002,18.320)
N3: (-23.146,-5.099,17.010)
OP1: (-15.535,-1.442,17.718)
OP2: (-17.359,-2.035,19.411)
C2: (-22.386,-4.911,15.880)
C1': (-20.186,-4.424,14.938)
C3': (-19.105,-2.332,14.646)
O5': (-17.481,-2.820,17.064)
O4': (-18.831,-4.560,15.325)
C5': (-16.954,-3.126,15.773)
P: (-16.515,-2.409,18.253)
C4': (-18.075,-3.435,14.822)
C2': (-20.348,-3.095,14.201)
O2': (-20.358,-3.343,12.811)
N1: (-21.054,-4.591,16.115)
O4: (-23.519,-5.273,19.230)
O2: (-22.854,-5.023,14.752)
C6: (-20.576,-4.456,17.402)
C5: (-21.345,-4.645,18.482)
O3': (-18.683,-1.424,13.642)
N3: (-23.146,-5.099,17.010)
OP1: (-15.535,-1.442,17.718)
OP2: (-17.359,-2.035,19.411)
C2: (-22.386,-4.911,15.880)
C1': (-20.186,-4.424,14.938)
C3': (-19.105,-2.332,14.646)
O5': (-17.481,-2.820,17.064)
O4': (-18.831,-4.560,15.325)
C5': (-16.954,-3.126,15.773)
P: (-16.515,-2.409,18.253)
C4': (-18.075,-3.435,14.822)
C2': (-20.348,-3.095,14.201)
O2': (-20.358,-3.343,12.811)
N1: (-21.054,-4.591,16.115)
O4: (-23.519,-5.273,19.230)
O2: (-22.854,-5.023,14.752)
C6: (-20.576,-4.456,17.402)
C5: (-21.345,-4.645,18.482)
O3': (-18.683,-1.424,13.642)
Image (generated by PyMOL):