ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3FO6:A34:A32

Extra

PDB:
ATOM 1 O3' U A 33 3.024 16.630 -1.652 1.00 44.31 O
ATOM 2 P U A 34 4.314 17.408 -1.077 1.00 43.47 P
ATOM 3 OP1 U A 34 3.995 18.859 -1.163 1.00 43.41 O
ATOM 4 OP2 U A 34 5.523 16.880 -1.758 1.00 44.40 O
ATOM 5 O5' U A 34 4.401 17.008 0.467 1.00 42.83 O
ATOM 6 C5' U A 34 3.226 16.848 1.251 1.00 39.80 C
ATOM 7 C4' U A 34 3.510 17.106 2.716 1.00 39.05 C
ATOM 8 O4' U A 34 3.385 15.848 3.439 1.00 37.62 O
ATOM 9 C3' U A 34 4.914 17.612 3.050 1.00 39.02 C
ATOM 10 O3' U A 34 4.887 18.328 4.283 1.00 40.97 O
ATOM 11 C2' U A 34 5.706 16.318 3.224 1.00 38.85 C
ATOM 12 O2' U A 34 6.789 16.447 4.127 1.00 37.92 O
ATOM 13 C1' U A 34 4.660 15.423 3.877 1.00 37.52 C
ATOM 14 N1 U A 34 4.810 13.977 3.661 1.00 36.90 N
ATOM 15 C2 U A 34 4.552 13.163 4.741 1.00 35.21 C
ATOM 16 O2 U A 34 4.197 13.599 5.821 1.00 34.88 O
ATOM 17 N3 U A 34 4.726 11.822 4.516 1.00 35.04 N
ATOM 18 C4 U A 34 5.131 11.223 3.346 1.00 35.18 C
ATOM 19 O4 U A 34 5.310 10.002 3.326 1.00 33.68 O
ATOM 20 C5 U A 34 5.372 12.132 2.263 1.00 36.48 C
ATOM 21 C6 U A 34 5.204 13.448 2.453 1.00 37.08 C
ATOM 22 P C A 35 6.010 19.442 4.592 1.00 43.53 P
ATOM 23 OP1 C A 35 5.664 20.673 3.830 1.00 43.80 O
ATOM 24 OP2 C A 35 7.355 18.830 4.420 1.00 43.56 O
ATOM 25 O5' C A 35 5.817 19.751 6.143 1.00 42.16 O
TER

ATOM 1 O3' G B 31 12.717 15.517 -3.252 1.00 34.58 O
ATOM 2 P U B 32 11.170 15.755 -3.614 1.00 36.15 P
ATOM 3 OP1 U B 32 10.963 15.063 -4.911 1.00 36.20 O
ATOM 4 OP2 U B 32 10.861 17.204 -3.498 1.00 35.18 O
ATOM 5 O5' U B 32 10.369 14.969 -2.479 1.00 36.08 O
ATOM 6 C5' U B 32 10.775 13.661 -2.082 1.00 36.59 C
ATOM 7 C4' U B 32 9.754 13.026 -1.156 1.00 37.12 C
ATOM 8 O4' U B 32 10.064 13.402 0.220 1.00 36.95 O
ATOM 9 C3' U B 32 8.311 13.483 -1.375 1.00 37.85 C
ATOM 10 O3' U B 32 7.413 12.489 -0.884 1.00 40.26 O
ATOM 11 C2' U B 32 8.216 14.718 -0.483 1.00 37.66 C
ATOM 12 O2' U B 32 6.902 14.981 -0.030 1.00 36.49 O
ATOM 13 C1' U B 32 9.066 14.276 0.705 1.00 36.65 C
ATOM 14 N1 U B 32 9.674 15.346 1.506 1.00 36.84 N
ATOM 15 C2 U B 32 9.562 15.240 2.881 1.00 36.98 C
ATOM 16 O2 U B 32 9.042 14.282 3.430 1.00 37.04 O
ATOM 17 N3 U B 32 10.085 16.292 3.589 1.00 36.72 N
ATOM 18 C4 U B 32 10.711 17.406 3.076 1.00 37.55 C
ATOM 19 O4 U B 32 11.074 18.297 3.842 1.00 39.24 O
ATOM 20 C5 U B 32 10.819 17.428 1.647 1.00 37.81 C
ATOM 21 C6 U B 32 10.307 16.421 0.928 1.00 36.87 C
ATOM 22 P U B 33 6.518 11.629 -1.910 1.00 41.64 P
ATOM 23 OP1 U B 33 5.779 10.632 -1.093 1.00 40.73 O
ATOM 24 OP2 U B 33 7.378 11.170 -3.029 1.00 42.12 O
ATOM 25 O5' U B 33 5.459 12.677 -2.473 1.00 43.10 O
TER

Atoms:
C4: (5.131,11.223,3.346)
N3: (4.726,11.822,4.516)
OP1: (3.995,18.859,-1.163)
OP2: (5.523,16.880,-1.758)
C2: (4.552,13.163,4.741)
C1': (4.660,15.423,3.877)
C3': (4.914,17.612,3.050)
O5': (4.401,17.008,0.467)
O4': (3.385,15.848,3.439)
C5': (3.226,16.848,1.251)
P: (4.314,17.408,-1.077)
C4': (3.510,17.106,2.716)
C2': (5.706,16.318,3.224)
O2': (6.789,16.447,4.127)
N1: (4.810,13.977,3.661)
O4: (5.310,10.002,3.326)
O2: (4.197,13.599,5.821)
C6: (5.204,13.448,2.453)
C5: (5.372,12.132,2.263)
O3': (4.887,18.328,4.283)
C4: (10.711,17.406,3.076)
N3: (10.085,16.292,3.589)
OP1: (10.963,15.063,-4.911)
OP2: (10.861,17.204,-3.498)
C2: (9.562,15.240,2.881)
C1': (9.066,14.276,0.705)
C3': (8.311,13.483,-1.375)
O5': (10.369,14.969,-2.479)
O4': (10.064,13.402,0.220)
C5': (10.775,13.661,-2.082)
P: (11.170,15.755,-3.614)
C4': (9.754,13.026,-1.156)
C2': (8.216,14.718,-0.483)
O2': (6.902,14.981,-0.030)
N1: (9.674,15.346,1.506)
O4: (11.074,18.297,3.842)
O2: (9.042,14.282,3.430)
C6: (10.307,16.421,0.928)
C5: (10.819,17.428,1.647)
O3': (7.413,12.489,-0.884)
Image (generated by PyMOL):
PyMOL image
show in jmol