ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:017:01277

Extra

PDB:
ATOM 1 O3' U A 16 27.830 130.637 63.869 1.00 29.36 O
ATOM 2 P U A 17 28.069 130.200 62.352 1.00 34.20 P
ATOM 3 OP1 U A 17 27.899 128.728 62.338 1.00 33.71 O
ATOM 4 OP2 U A 17 29.334 130.794 61.852 1.00 32.79 O
ATOM 5 O5' U A 17 26.859 130.888 61.577 1.00 34.66 O
ATOM 6 C5' U A 17 25.498 130.475 61.815 1.00 32.58 C
ATOM 7 C4' U A 17 24.534 131.412 61.132 1.00 31.24 C
ATOM 8 O4' U A 17 24.547 132.703 61.791 1.00 32.55 O
ATOM 9 C3' U A 17 24.838 131.742 59.684 1.00 31.56 C
ATOM 10 O3' U A 17 24.419 130.714 58.803 1.00 32.30 O
ATOM 11 C2' U A 17 24.070 133.038 59.496 1.00 32.12 C
ATOM 12 O2' U A 17 22.680 132.837 59.399 1.00 34.04 O
ATOM 13 C1' U A 17 24.335 133.728 60.831 1.00 33.58 C
ATOM 14 N1 U A 17 25.519 134.605 60.784 1.00 35.55 N
ATOM 15 C2 U A 17 25.324 135.938 60.429 1.00 36.09 C
ATOM 16 O2 U A 17 24.229 136.404 60.167 1.00 36.55 O
ATOM 17 N3 U A 17 26.465 136.701 60.392 1.00 35.53 N
ATOM 18 C4 U A 17 27.748 136.286 60.671 1.00 35.34 C
ATOM 19 O4 U A 17 28.666 137.096 60.613 1.00 35.13 O
ATOM 20 C5 U A 17 27.869 134.906 61.030 1.00 35.08 C
ATOM 21 C6 U A 17 26.782 134.132 61.074 1.00 34.18 C
ATOM 22 P G A 18 25.227 130.463 57.440 1.00 35.34 P
ATOM 23 OP1 G A 18 24.707 129.222 56.806 1.00 30.83 O
ATOM 24 OP2 G A 18 26.682 130.586 57.699 1.00 36.65 O
ATOM 25 O5' G A 18 24.841 131.726 56.562 1.00 35.39 O
TER

ATOM 1 O3' A B1276 14.028 130.400 58.942 1.00 35.64 O
ATOM 2 P A B1277 14.526 130.353 60.466 1.00 35.53 P
ATOM 3 OP1 A B1277 14.208 128.987 60.970 1.00 35.39 O
ATOM 4 OP2 A B1277 14.009 131.543 61.192 1.00 32.20 O
ATOM 5 O5' A B1277 16.103 130.498 60.332 1.00 35.59 O
ATOM 6 C5' A B1277 16.861 129.575 59.532 1.00 33.60 C
ATOM 7 C4' A B1277 18.294 130.032 59.436 1.00 35.10 C
ATOM 8 O4' A B1277 18.381 131.251 58.649 1.00 33.55 O
ATOM 9 C3' A B1277 18.952 130.397 60.758 1.00 33.87 C
ATOM 10 O3' A B1277 19.427 129.236 61.423 1.00 35.74 O
ATOM 11 C2' A B1277 20.092 131.288 60.293 1.00 32.38 C
ATOM 12 O2' A B1277 21.140 130.515 59.742 1.00 29.72 O
ATOM 13 C1' A B1277 19.405 132.081 59.176 1.00 31.30 C
ATOM 14 N9 A B1277 18.785 133.306 59.682 1.00 30.20 N
ATOM 15 C8 A B1277 17.485 133.501 60.081 1.00 28.39 C
ATOM 16 N7 A B1277 17.246 134.708 60.535 1.00 27.84 N
ATOM 17 C5 A B1277 18.467 135.356 60.422 1.00 28.60 C
ATOM 18 C6 A B1277 18.884 136.660 60.750 1.00 29.37 C
ATOM 19 N6 A B1277 18.092 137.581 61.312 1.00 27.67 N
ATOM 20 N1 A B1277 20.167 136.989 60.488 1.00 27.36 N
ATOM 21 C2 A B1277 20.974 136.062 59.959 1.00 27.69 C
ATOM 22 N3 A B1277 20.710 134.805 59.627 1.00 28.63 N
ATOM 23 C4 A B1277 19.422 134.509 59.883 1.00 30.54 C
ATOM 24 P G B1278 19.353 129.144 63.022 1.00 35.08 P
ATOM 25 OP1 G B1278 20.005 127.862 63.375 1.00 35.63 O
ATOM 26 OP2 G B1278 17.969 129.412 63.479 1.00 35.48 O
ATOM 27 O5' G B1278 20.270 130.348 63.514 1.00 37.43 O
TER

Atoms:
C4: (27.748,136.286,60.671)
N3: (26.465,136.701,60.392)
OP1: (27.899,128.728,62.338)
OP2: (29.334,130.794,61.852)
C2: (25.324,135.938,60.429)
C1': (24.335,133.728,60.831)
C3': (24.838,131.742,59.684)
O5': (26.859,130.888,61.577)
O4': (24.547,132.703,61.791)
C5': (25.498,130.475,61.815)
P: (28.069,130.200,62.352)
C4': (24.534,131.412,61.132)
C2': (24.070,133.038,59.496)
O2': (22.680,132.837,59.399)
N1: (25.519,134.605,60.784)
O4: (28.666,137.096,60.613)
O2: (24.229,136.404,60.167)
C6: (26.782,134.132,61.074)
C5: (27.869,134.906,61.030)
O3': (24.419,130.714,58.803)
OP1: (14.208,128.987,60.970)
OP2: (14.009,131.543,61.192)
C3': (18.952,130.397,60.758)
C1': (19.405,132.081,59.176)
C5': (16.861,129.575,59.532)
O4': (18.381,131.251,58.649)
C8: (17.485,133.501,60.081)
O2': (21.140,130.515,59.742)
C6: (18.884,136.660,60.750)
C5: (18.467,135.356,60.422)
C4: (19.422,134.509,59.883)
P: (14.526,130.353,60.466)
C4': (18.294,130.032,59.436)
C2': (20.092,131.288,60.293)
C2: (20.974,136.062,59.959)
N1: (20.167,136.989,60.488)
N3: (20.710,134.805,59.627)
N6: (18.092,137.581,61.312)
N7: (17.246,134.708,60.535)
N9: (18.785,133.306,59.682)
O5': (16.103,130.498,60.332)
O3': (19.427,129.236,61.423)
Image (generated by PyMOL):
PyMOL image
show in jmol