Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GER:A34:A32
Extra
PDB:
ATOM 1 O3' U A 33 3.091 15.875 -1.813 1.00 35.28 O
ATOM 2 P U A 34 4.379 16.620 -1.198 1.00 35.33 P
ATOM 3 OP1 U A 34 4.099 18.076 -1.256 1.00 34.88 O
ATOM 4 OP2 U A 34 5.592 16.079 -1.863 1.00 35.03 O
ATOM 5 O5' U A 34 4.419 16.180 0.336 1.00 33.92 O
ATOM 6 C5' U A 34 3.231 16.147 1.125 1.00 33.76 C
ATOM 7 C4' U A 34 3.538 16.447 2.578 1.00 32.15 C
ATOM 8 O4' U A 34 3.423 15.216 3.344 1.00 31.97 O
ATOM 9 C3' U A 34 4.952 16.953 2.856 1.00 32.73 C
ATOM 10 O3' U A 34 4.963 17.727 4.053 1.00 33.64 O
ATOM 11 C2' U A 34 5.738 15.659 3.048 1.00 31.84 C
ATOM 12 O2' U A 34 6.877 15.798 3.875 1.00 31.75 O
ATOM 13 C1' U A 34 4.707 14.794 3.765 1.00 30.92 C
ATOM 14 N1 U A 34 4.844 13.344 3.562 1.00 29.14 N
ATOM 15 C2 U A 34 4.533 12.530 4.632 1.00 28.30 C
ATOM 16 O2 U A 34 4.133 12.966 5.697 1.00 28.80 O
ATOM 17 N3 U A 34 4.706 11.189 4.410 1.00 27.58 N
ATOM 18 C4 U A 34 5.143 10.589 3.249 1.00 27.44 C
ATOM 19 O4 U A 34 5.246 9.362 3.206 1.00 27.28 O
ATOM 20 C5 U A 34 5.435 11.498 2.181 1.00 27.45 C
ATOM 21 C6 U A 34 5.276 12.813 2.369 1.00 28.06 C
ATOM 22 P C A 35 6.113 18.825 4.286 1.00 35.01 P
ATOM 23 OP1 C A 35 5.848 19.990 3.404 1.00 35.44 O
ATOM 24 OP2 C A 35 7.425 18.130 4.208 1.00 35.05 O
ATOM 25 O5' C A 35 5.896 19.289 5.792 1.00 34.48 O
TER
ATOM 1 O3' G B 31 12.764 14.764 -3.357 1.00 27.05 O
ATOM 2 P U B 32 11.190 14.959 -3.647 1.00 27.66 P
ATOM 3 OP1 U B 32 10.917 14.174 -4.877 1.00 28.59 O
ATOM 4 OP2 U B 32 10.854 16.400 -3.610 1.00 27.64 O
ATOM 5 O5' U B 32 10.468 14.245 -2.417 1.00 28.13 O
ATOM 6 C5' U B 32 10.810 12.914 -2.047 1.00 28.37 C
ATOM 7 C4' U B 32 9.768 12.319 -1.119 1.00 29.20 C
ATOM 8 O4' U B 32 10.052 12.740 0.249 1.00 28.84 O
ATOM 9 C3' U B 32 8.333 12.774 -1.383 1.00 29.70 C
ATOM 10 O3' U B 32 7.419 11.787 -0.906 1.00 30.94 O
ATOM 11 C2' U B 32 8.228 14.039 -0.533 1.00 29.32 C
ATOM 12 O2' U B 32 6.913 14.342 -0.113 1.00 29.60 O
ATOM 13 C1' U B 32 9.052 13.639 0.688 1.00 28.82 C
ATOM 14 N1 U B 32 9.663 14.745 1.439 1.00 28.17 N
ATOM 15 C2 U B 32 9.602 14.687 2.821 1.00 28.22 C
ATOM 16 O2 U B 32 9.122 13.745 3.427 1.00 27.33 O
ATOM 17 N3 U B 32 10.133 15.773 3.470 1.00 28.52 N
ATOM 18 C4 U B 32 10.720 16.877 2.892 1.00 28.63 C
ATOM 19 O4 U B 32 11.118 17.792 3.610 1.00 29.31 O
ATOM 20 C5 U B 32 10.770 16.850 1.463 1.00 28.78 C
ATOM 21 C6 U B 32 10.253 15.810 0.801 1.00 28.60 C
ATOM 22 P U B 33 6.563 10.907 -1.950 1.00 31.74 P
ATOM 23 OP1 U B 33 5.849 9.886 -1.146 1.00 31.19 O
ATOM 24 OP2 U B 33 7.439 10.477 -3.067 1.00 32.01 O
ATOM 25 O5' U B 33 5.490 11.930 -2.525 1.00 32.25 O
TER
ATOM 2 P U A 34 4.379 16.620 -1.198 1.00 35.33 P
ATOM 3 OP1 U A 34 4.099 18.076 -1.256 1.00 34.88 O
ATOM 4 OP2 U A 34 5.592 16.079 -1.863 1.00 35.03 O
ATOM 5 O5' U A 34 4.419 16.180 0.336 1.00 33.92 O
ATOM 6 C5' U A 34 3.231 16.147 1.125 1.00 33.76 C
ATOM 7 C4' U A 34 3.538 16.447 2.578 1.00 32.15 C
ATOM 8 O4' U A 34 3.423 15.216 3.344 1.00 31.97 O
ATOM 9 C3' U A 34 4.952 16.953 2.856 1.00 32.73 C
ATOM 10 O3' U A 34 4.963 17.727 4.053 1.00 33.64 O
ATOM 11 C2' U A 34 5.738 15.659 3.048 1.00 31.84 C
ATOM 12 O2' U A 34 6.877 15.798 3.875 1.00 31.75 O
ATOM 13 C1' U A 34 4.707 14.794 3.765 1.00 30.92 C
ATOM 14 N1 U A 34 4.844 13.344 3.562 1.00 29.14 N
ATOM 15 C2 U A 34 4.533 12.530 4.632 1.00 28.30 C
ATOM 16 O2 U A 34 4.133 12.966 5.697 1.00 28.80 O
ATOM 17 N3 U A 34 4.706 11.189 4.410 1.00 27.58 N
ATOM 18 C4 U A 34 5.143 10.589 3.249 1.00 27.44 C
ATOM 19 O4 U A 34 5.246 9.362 3.206 1.00 27.28 O
ATOM 20 C5 U A 34 5.435 11.498 2.181 1.00 27.45 C
ATOM 21 C6 U A 34 5.276 12.813 2.369 1.00 28.06 C
ATOM 22 P C A 35 6.113 18.825 4.286 1.00 35.01 P
ATOM 23 OP1 C A 35 5.848 19.990 3.404 1.00 35.44 O
ATOM 24 OP2 C A 35 7.425 18.130 4.208 1.00 35.05 O
ATOM 25 O5' C A 35 5.896 19.289 5.792 1.00 34.48 O
TER
ATOM 1 O3' G B 31 12.764 14.764 -3.357 1.00 27.05 O
ATOM 2 P U B 32 11.190 14.959 -3.647 1.00 27.66 P
ATOM 3 OP1 U B 32 10.917 14.174 -4.877 1.00 28.59 O
ATOM 4 OP2 U B 32 10.854 16.400 -3.610 1.00 27.64 O
ATOM 5 O5' U B 32 10.468 14.245 -2.417 1.00 28.13 O
ATOM 6 C5' U B 32 10.810 12.914 -2.047 1.00 28.37 C
ATOM 7 C4' U B 32 9.768 12.319 -1.119 1.00 29.20 C
ATOM 8 O4' U B 32 10.052 12.740 0.249 1.00 28.84 O
ATOM 9 C3' U B 32 8.333 12.774 -1.383 1.00 29.70 C
ATOM 10 O3' U B 32 7.419 11.787 -0.906 1.00 30.94 O
ATOM 11 C2' U B 32 8.228 14.039 -0.533 1.00 29.32 C
ATOM 12 O2' U B 32 6.913 14.342 -0.113 1.00 29.60 O
ATOM 13 C1' U B 32 9.052 13.639 0.688 1.00 28.82 C
ATOM 14 N1 U B 32 9.663 14.745 1.439 1.00 28.17 N
ATOM 15 C2 U B 32 9.602 14.687 2.821 1.00 28.22 C
ATOM 16 O2 U B 32 9.122 13.745 3.427 1.00 27.33 O
ATOM 17 N3 U B 32 10.133 15.773 3.470 1.00 28.52 N
ATOM 18 C4 U B 32 10.720 16.877 2.892 1.00 28.63 C
ATOM 19 O4 U B 32 11.118 17.792 3.610 1.00 29.31 O
ATOM 20 C5 U B 32 10.770 16.850 1.463 1.00 28.78 C
ATOM 21 C6 U B 32 10.253 15.810 0.801 1.00 28.60 C
ATOM 22 P U B 33 6.563 10.907 -1.950 1.00 31.74 P
ATOM 23 OP1 U B 33 5.849 9.886 -1.146 1.00 31.19 O
ATOM 24 OP2 U B 33 7.439 10.477 -3.067 1.00 32.01 O
ATOM 25 O5' U B 33 5.490 11.930 -2.525 1.00 32.25 O
TER
Atoms:
C4: (5.143,10.589,3.249)
N3: (4.706,11.189,4.410)
OP1: (4.099,18.076,-1.256)
OP2: (5.592,16.079,-1.863)
C2: (4.533,12.530,4.632)
C1': (4.707,14.794,3.765)
C3': (4.952,16.953,2.856)
O5': (4.419,16.180,0.336)
O4': (3.423,15.216,3.344)
C5': (3.231,16.147,1.125)
P: (4.379,16.620,-1.198)
C4': (3.538,16.447,2.578)
C2': (5.738,15.659,3.048)
O2': (6.877,15.798,3.875)
N1: (4.844,13.344,3.562)
O4: (5.246,9.362,3.206)
O2: (4.133,12.966,5.697)
C6: (5.276,12.813,2.369)
C5: (5.435,11.498,2.181)
O3': (4.963,17.727,4.053)
N3: (4.706,11.189,4.410)
OP1: (4.099,18.076,-1.256)
OP2: (5.592,16.079,-1.863)
C2: (4.533,12.530,4.632)
C1': (4.707,14.794,3.765)
C3': (4.952,16.953,2.856)
O5': (4.419,16.180,0.336)
O4': (3.423,15.216,3.344)
C5': (3.231,16.147,1.125)
P: (4.379,16.620,-1.198)
C4': (3.538,16.447,2.578)
C2': (5.738,15.659,3.048)
O2': (6.877,15.798,3.875)
N1: (4.844,13.344,3.562)
O4: (5.246,9.362,3.206)
O2: (4.133,12.966,5.697)
C6: (5.276,12.813,2.369)
C5: (5.435,11.498,2.181)
O3': (4.963,17.727,4.053)
C4: (10.720,16.877,2.892)
N3: (10.133,15.773,3.470)
OP1: (10.917,14.174,-4.877)
OP2: (10.854,16.400,-3.610)
C2: (9.602,14.687,2.821)
C1': (9.052,13.639,0.688)
C3': (8.333,12.774,-1.383)
O5': (10.468,14.245,-2.417)
O4': (10.052,12.740,0.249)
C5': (10.810,12.914,-2.047)
P: (11.190,14.959,-3.647)
C4': (9.768,12.319,-1.119)
C2': (8.228,14.039,-0.533)
O2': (6.913,14.342,-0.113)
N1: (9.663,14.745,1.439)
O4: (11.118,17.792,3.610)
O2: (9.122,13.745,3.427)
C6: (10.253,15.810,0.801)
C5: (10.770,16.850,1.463)
O3': (7.419,11.787,-0.906)
N3: (10.133,15.773,3.470)
OP1: (10.917,14.174,-4.877)
OP2: (10.854,16.400,-3.610)
C2: (9.602,14.687,2.821)
C1': (9.052,13.639,0.688)
C3': (8.333,12.774,-1.383)
O5': (10.468,14.245,-2.417)
O4': (10.052,12.740,0.249)
C5': (10.810,12.914,-2.047)
P: (11.190,14.959,-3.647)
C4': (9.768,12.319,-1.119)
C2': (8.228,14.039,-0.533)
O2': (6.913,14.342,-0.113)
N1: (9.663,14.745,1.439)
O4: (11.118,17.792,3.610)
O2: (9.122,13.745,3.427)
C6: (10.253,15.810,0.801)
C5: (10.770,16.850,1.463)
O3': (7.419,11.787,-0.906)
Image (generated by PyMOL):