Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GOT:A34:A32
Extra
PDB:
ATOM 1 O3' U A 33 -3.200 -15.234 -1.924 1.00 52.67 O
ATOM 2 P U A 34 -4.424 -16.017 -1.200 1.00 51.35 P
ATOM 3 OP1 U A 34 -4.033 -17.457 -1.215 1.00 49.95 O
ATOM 4 OP2 U A 34 -5.757 -15.609 -1.752 1.00 49.85 O
ATOM 5 O5' U A 34 -4.378 -15.520 0.321 1.00 48.74 O
ATOM 6 C5' U A 34 -3.317 -15.907 1.192 1.00 46.39 C
ATOM 7 C4' U A 34 -3.712 -15.681 2.632 1.00 45.00 C
ATOM 8 O4' U A 34 -3.584 -14.274 2.948 1.00 44.04 O
ATOM 9 C3' U A 34 -5.146 -16.084 2.979 1.00 45.36 C
ATOM 10 O3' U A 34 -5.140 -16.870 4.162 1.00 46.59 O
ATOM 11 C2' U A 34 -5.865 -14.744 3.161 1.00 44.21 C
ATOM 12 O2' U A 34 -6.913 -14.755 4.121 1.00 44.78 O
ATOM 13 C1' U A 34 -4.725 -13.863 3.657 1.00 43.59 C
ATOM 14 N1 U A 34 -4.917 -12.416 3.474 1.00 41.93 N
ATOM 15 C2 U A 34 -4.587 -11.617 4.547 1.00 40.51 C
ATOM 16 O2 U A 34 -4.175 -12.066 5.597 1.00 41.45 O
ATOM 17 N3 U A 34 -4.766 -10.283 4.359 1.00 40.56 N
ATOM 18 C4 U A 34 -5.240 -9.659 3.228 1.00 40.35 C
ATOM 19 O4 U A 34 -5.320 -8.428 3.217 1.00 40.72 O
ATOM 20 C5 U A 34 -5.583 -10.554 2.147 1.00 40.45 C
ATOM 21 C6 U A 34 -5.407 -11.873 2.306 1.00 41.32 C
ATOM 22 P C A 35 -6.330 -17.919 4.431 1.00 49.27 P
ATOM 23 OP1 C A 35 -6.163 -19.100 3.534 1.00 48.38 O
ATOM 24 OP2 C A 35 -7.620 -17.173 4.426 1.00 47.38 O
ATOM 25 O5' C A 35 -6.059 -18.396 5.918 1.00 47.63 O
TER
ATOM 1 O3' G B 31 -13.016 -13.911 -3.277 1.00 38.79 O
ATOM 2 P U B 32 -11.422 -14.070 -3.470 1.00 37.69 P
ATOM 3 OP1 U B 32 -11.213 -13.270 -4.702 1.00 39.98 O
ATOM 4 OP2 U B 32 -11.032 -15.500 -3.461 1.00 39.07 O
ATOM 5 O5' U B 32 -10.780 -13.357 -2.205 1.00 38.47 O
ATOM 6 C5' U B 32 -10.738 -11.943 -2.087 1.00 39.22 C
ATOM 7 C4' U B 32 -9.752 -11.551 -1.001 1.00 41.75 C
ATOM 8 O4' U B 32 -10.208 -12.085 0.294 1.00 41.60 O
ATOM 9 C3' U B 32 -8.348 -12.119 -1.223 1.00 42.81 C
ATOM 10 O3' U B 32 -7.338 -11.181 -0.816 1.00 46.73 O
ATOM 11 C2' U B 32 -8.335 -13.350 -0.308 1.00 42.23 C
ATOM 12 O2' U B 32 -7.053 -13.702 0.168 1.00 40.50 O
ATOM 13 C1' U B 32 -9.184 -12.869 0.869 1.00 40.62 C
ATOM 14 N1 U B 32 -9.774 -13.967 1.657 1.00 40.05 N
ATOM 15 C2 U B 32 -9.694 -13.879 3.036 1.00 39.56 C
ATOM 16 O2 U B 32 -9.268 -12.890 3.603 1.00 40.89 O
ATOM 17 N3 U B 32 -10.157 -14.979 3.722 1.00 39.81 N
ATOM 18 C4 U B 32 -10.736 -16.111 3.178 1.00 39.98 C
ATOM 19 O4 U B 32 -11.083 -17.025 3.918 1.00 40.84 O
ATOM 20 C5 U B 32 -10.842 -16.106 1.742 1.00 39.96 C
ATOM 21 C6 U B 32 -10.358 -15.060 1.049 1.00 39.44 C
ATOM 22 P U B 33 -6.563 -10.273 -1.916 1.00 47.82 P
ATOM 23 OP1 U B 33 -5.828 -9.254 -1.131 1.00 46.81 O
ATOM 24 OP2 U B 33 -7.483 -9.855 -2.996 1.00 48.06 O
ATOM 25 O5' U B 33 -5.503 -11.274 -2.540 1.00 49.45 O
TER
ATOM 2 P U A 34 -4.424 -16.017 -1.200 1.00 51.35 P
ATOM 3 OP1 U A 34 -4.033 -17.457 -1.215 1.00 49.95 O
ATOM 4 OP2 U A 34 -5.757 -15.609 -1.752 1.00 49.85 O
ATOM 5 O5' U A 34 -4.378 -15.520 0.321 1.00 48.74 O
ATOM 6 C5' U A 34 -3.317 -15.907 1.192 1.00 46.39 C
ATOM 7 C4' U A 34 -3.712 -15.681 2.632 1.00 45.00 C
ATOM 8 O4' U A 34 -3.584 -14.274 2.948 1.00 44.04 O
ATOM 9 C3' U A 34 -5.146 -16.084 2.979 1.00 45.36 C
ATOM 10 O3' U A 34 -5.140 -16.870 4.162 1.00 46.59 O
ATOM 11 C2' U A 34 -5.865 -14.744 3.161 1.00 44.21 C
ATOM 12 O2' U A 34 -6.913 -14.755 4.121 1.00 44.78 O
ATOM 13 C1' U A 34 -4.725 -13.863 3.657 1.00 43.59 C
ATOM 14 N1 U A 34 -4.917 -12.416 3.474 1.00 41.93 N
ATOM 15 C2 U A 34 -4.587 -11.617 4.547 1.00 40.51 C
ATOM 16 O2 U A 34 -4.175 -12.066 5.597 1.00 41.45 O
ATOM 17 N3 U A 34 -4.766 -10.283 4.359 1.00 40.56 N
ATOM 18 C4 U A 34 -5.240 -9.659 3.228 1.00 40.35 C
ATOM 19 O4 U A 34 -5.320 -8.428 3.217 1.00 40.72 O
ATOM 20 C5 U A 34 -5.583 -10.554 2.147 1.00 40.45 C
ATOM 21 C6 U A 34 -5.407 -11.873 2.306 1.00 41.32 C
ATOM 22 P C A 35 -6.330 -17.919 4.431 1.00 49.27 P
ATOM 23 OP1 C A 35 -6.163 -19.100 3.534 1.00 48.38 O
ATOM 24 OP2 C A 35 -7.620 -17.173 4.426 1.00 47.38 O
ATOM 25 O5' C A 35 -6.059 -18.396 5.918 1.00 47.63 O
TER
ATOM 1 O3' G B 31 -13.016 -13.911 -3.277 1.00 38.79 O
ATOM 2 P U B 32 -11.422 -14.070 -3.470 1.00 37.69 P
ATOM 3 OP1 U B 32 -11.213 -13.270 -4.702 1.00 39.98 O
ATOM 4 OP2 U B 32 -11.032 -15.500 -3.461 1.00 39.07 O
ATOM 5 O5' U B 32 -10.780 -13.357 -2.205 1.00 38.47 O
ATOM 6 C5' U B 32 -10.738 -11.943 -2.087 1.00 39.22 C
ATOM 7 C4' U B 32 -9.752 -11.551 -1.001 1.00 41.75 C
ATOM 8 O4' U B 32 -10.208 -12.085 0.294 1.00 41.60 O
ATOM 9 C3' U B 32 -8.348 -12.119 -1.223 1.00 42.81 C
ATOM 10 O3' U B 32 -7.338 -11.181 -0.816 1.00 46.73 O
ATOM 11 C2' U B 32 -8.335 -13.350 -0.308 1.00 42.23 C
ATOM 12 O2' U B 32 -7.053 -13.702 0.168 1.00 40.50 O
ATOM 13 C1' U B 32 -9.184 -12.869 0.869 1.00 40.62 C
ATOM 14 N1 U B 32 -9.774 -13.967 1.657 1.00 40.05 N
ATOM 15 C2 U B 32 -9.694 -13.879 3.036 1.00 39.56 C
ATOM 16 O2 U B 32 -9.268 -12.890 3.603 1.00 40.89 O
ATOM 17 N3 U B 32 -10.157 -14.979 3.722 1.00 39.81 N
ATOM 18 C4 U B 32 -10.736 -16.111 3.178 1.00 39.98 C
ATOM 19 O4 U B 32 -11.083 -17.025 3.918 1.00 40.84 O
ATOM 20 C5 U B 32 -10.842 -16.106 1.742 1.00 39.96 C
ATOM 21 C6 U B 32 -10.358 -15.060 1.049 1.00 39.44 C
ATOM 22 P U B 33 -6.563 -10.273 -1.916 1.00 47.82 P
ATOM 23 OP1 U B 33 -5.828 -9.254 -1.131 1.00 46.81 O
ATOM 24 OP2 U B 33 -7.483 -9.855 -2.996 1.00 48.06 O
ATOM 25 O5' U B 33 -5.503 -11.274 -2.540 1.00 49.45 O
TER
Atoms:
C4: (-5.240,-9.659,3.228)
N3: (-4.766,-10.283,4.359)
OP1: (-4.033,-17.457,-1.215)
OP2: (-5.757,-15.609,-1.752)
C2: (-4.587,-11.617,4.547)
C1': (-4.725,-13.863,3.657)
C3': (-5.146,-16.084,2.979)
O5': (-4.378,-15.520,0.321)
O4': (-3.584,-14.274,2.948)
C5': (-3.317,-15.907,1.192)
P: (-4.424,-16.017,-1.200)
C4': (-3.712,-15.681,2.632)
C2': (-5.865,-14.744,3.161)
O2': (-6.913,-14.755,4.121)
N1: (-4.917,-12.416,3.474)
O4: (-5.320,-8.428,3.217)
O2: (-4.175,-12.066,5.597)
C6: (-5.407,-11.873,2.306)
C5: (-5.583,-10.554,2.147)
O3': (-5.140,-16.870,4.162)
N3: (-4.766,-10.283,4.359)
OP1: (-4.033,-17.457,-1.215)
OP2: (-5.757,-15.609,-1.752)
C2: (-4.587,-11.617,4.547)
C1': (-4.725,-13.863,3.657)
C3': (-5.146,-16.084,2.979)
O5': (-4.378,-15.520,0.321)
O4': (-3.584,-14.274,2.948)
C5': (-3.317,-15.907,1.192)
P: (-4.424,-16.017,-1.200)
C4': (-3.712,-15.681,2.632)
C2': (-5.865,-14.744,3.161)
O2': (-6.913,-14.755,4.121)
N1: (-4.917,-12.416,3.474)
O4: (-5.320,-8.428,3.217)
O2: (-4.175,-12.066,5.597)
C6: (-5.407,-11.873,2.306)
C5: (-5.583,-10.554,2.147)
O3': (-5.140,-16.870,4.162)
C4: (-10.736,-16.111,3.178)
N3: (-10.157,-14.979,3.722)
OP1: (-11.213,-13.270,-4.702)
OP2: (-11.032,-15.500,-3.461)
C2: (-9.694,-13.879,3.036)
C1': (-9.184,-12.869,0.869)
C3': (-8.348,-12.119,-1.223)
O5': (-10.780,-13.357,-2.205)
O4': (-10.208,-12.085,0.294)
C5': (-10.738,-11.943,-2.087)
P: (-11.422,-14.070,-3.470)
C4': (-9.752,-11.551,-1.001)
C2': (-8.335,-13.350,-0.308)
O2': (-7.053,-13.702,0.168)
N1: (-9.774,-13.967,1.657)
O4: (-11.083,-17.025,3.918)
O2: (-9.268,-12.890,3.603)
C6: (-10.358,-15.060,1.049)
C5: (-10.842,-16.106,1.742)
O3': (-7.338,-11.181,-0.816)
N3: (-10.157,-14.979,3.722)
OP1: (-11.213,-13.270,-4.702)
OP2: (-11.032,-15.500,-3.461)
C2: (-9.694,-13.879,3.036)
C1': (-9.184,-12.869,0.869)
C3': (-8.348,-12.119,-1.223)
O5': (-10.780,-13.357,-2.205)
O4': (-10.208,-12.085,0.294)
C5': (-10.738,-11.943,-2.087)
P: (-11.422,-14.070,-3.470)
C4': (-9.752,-11.551,-1.001)
C2': (-8.335,-13.350,-0.308)
O2': (-7.053,-13.702,0.168)
N1: (-9.774,-13.967,1.657)
O4: (-11.083,-17.025,3.918)
O2: (-9.268,-12.890,3.603)
C6: (-10.358,-15.060,1.049)
C5: (-10.842,-16.106,1.742)
O3': (-7.338,-11.181,-0.816)
Image (generated by PyMOL):