ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K8A:A469:A499

Extra

PDB:
ATOM 1 O3' C A 468 29.619 147.128 54.862 1.00 44.74 O
ATOM 2 P U A 469 29.587 148.683 54.427 1.00 43.61 P
ATOM 3 OP1 U A 469 29.397 148.651 52.971 1.00 44.52 O
ATOM 4 OP2 U A 469 30.715 149.459 55.003 1.00 42.15 O
ATOM 5 O5' U A 469 28.238 149.249 55.043 1.00 42.70 O
ATOM 6 C5' U A 469 27.948 149.092 56.428 1.00 42.53 C
ATOM 7 C4' U A 469 26.925 150.111 56.863 1.00 43.05 C
ATOM 8 O4' U A 469 27.410 151.465 56.697 1.00 42.15 O
ATOM 9 C3' U A 469 25.670 150.083 56.037 1.00 42.87 C
ATOM 10 O3' U A 469 24.876 149.026 56.485 1.00 42.93 O
ATOM 11 C2' U A 469 25.073 151.445 56.317 1.00 43.80 C
ATOM 12 O2' U A 469 24.489 151.465 57.613 1.00 44.71 O
ATOM 13 C1' U A 469 26.339 152.308 56.315 1.00 43.61 C
ATOM 14 N1 U A 469 26.687 152.914 55.017 1.00 44.13 N
ATOM 15 C2 U A 469 26.035 154.083 54.626 1.00 44.49 C
ATOM 16 O2 U A 469 25.172 154.617 55.283 1.00 46.02 O
ATOM 17 N3 U A 469 26.444 154.597 53.421 1.00 44.92 N
ATOM 18 C4 U A 469 27.421 154.089 52.584 1.00 45.56 C
ATOM 19 O4 U A 469 27.743 154.722 51.576 1.00 45.18 O
ATOM 20 C5 U A 469 28.029 152.881 53.042 1.00 44.45 C
ATOM 21 C6 U A 469 27.651 152.346 54.205 1.00 44.41 C
ATOM 22 P G A 470 24.171 148.110 55.415 1.00 44.27 P
ATOM 23 OP1 G A 470 23.311 147.200 56.199 1.00 45.04 O
ATOM 24 OP2 G A 470 25.204 147.564 54.497 1.00 43.13 O
ATOM 25 O5' G A 470 23.292 149.170 54.628 1.00 45.18 O
TER

ATOM 1 O3' U B 498 19.704 149.646 65.671 1.00 79.84 O
ATOM 2 P A B 499 19.015 149.342 64.253 1.00 79.27 P
ATOM 3 OP1 A B 499 18.005 150.408 64.010 1.00 79.56 O
ATOM 4 OP2 A B 499 18.592 147.915 64.275 1.00 81.71 O
ATOM 5 O5' A B 499 20.189 149.540 63.196 1.00 73.65 O
ATOM 6 C5' A B 499 20.876 150.801 63.105 1.00 67.03 C
ATOM 7 C4' A B 499 21.913 150.774 62.002 1.00 62.21 C
ATOM 8 O4' A B 499 21.262 150.519 60.731 1.00 61.50 O
ATOM 9 C3' A B 499 22.634 152.099 61.795 1.00 58.91 C
ATOM 10 O3' A B 499 23.750 152.229 62.663 1.00 56.22 O
ATOM 11 C2' A B 499 23.063 152.015 60.346 1.00 58.40 C
ATOM 12 O2' A B 499 24.205 151.218 60.182 1.00 57.62 O
ATOM 13 C1' A B 499 21.851 151.325 59.723 1.00 59.12 C
ATOM 14 N9 A B 499 20.865 152.310 59.272 1.00 58.50 N
ATOM 15 C8 A B 499 19.710 152.751 59.877 1.00 58.72 C
ATOM 16 N7 A B 499 19.075 153.673 59.195 1.00 58.11 N
ATOM 17 C5 A B 499 19.860 153.846 58.063 1.00 57.92 C
ATOM 18 C6 A B 499 19.735 154.680 56.935 1.00 57.11 C
ATOM 19 N6 A B 499 18.716 155.512 56.731 1.00 57.04 N
ATOM 20 N1 A B 499 20.704 154.618 56.002 1.00 56.91 N
ATOM 21 C2 A B 499 21.712 153.758 56.182 1.00 57.45 C
ATOM 22 N3 A B 499 21.930 152.913 57.182 1.00 57.91 N
ATOM 23 C4 A B 499 20.960 153.011 58.100 1.00 57.92 C
ATOM 24 P G B 500 23.927 153.560 63.541 1.00 53.25 P
ATOM 25 OP1 G B 500 25.047 153.312 64.470 1.00 55.40 O
ATOM 26 OP2 G B 500 22.597 153.924 64.085 1.00 53.64 O
ATOM 27 O5' G B 500 24.394 154.655 62.488 1.00 52.01 O
TER

Atoms:
C4: (27.421,154.089,52.584)
N3: (26.444,154.597,53.421)
OP1: (29.397,148.651,52.971)
OP2: (30.715,149.459,55.003)
C2: (26.035,154.083,54.626)
C1': (26.339,152.308,56.315)
C3': (25.670,150.083,56.037)
O5': (28.238,149.249,55.043)
O4': (27.410,151.465,56.697)
C5': (27.948,149.092,56.428)
P: (29.587,148.683,54.427)
C4': (26.925,150.111,56.863)
C2': (25.073,151.445,56.317)
O2': (24.489,151.465,57.613)
N1: (26.687,152.914,55.017)
O4: (27.743,154.722,51.576)
O2: (25.172,154.617,55.283)
C6: (27.651,152.346,54.205)
C5: (28.029,152.881,53.042)
O3': (24.876,149.026,56.485)
OP1: (18.005,150.408,64.010)
OP2: (18.592,147.915,64.275)
C3': (22.634,152.099,61.795)
C1': (21.851,151.325,59.723)
C5': (20.876,150.801,63.105)
O4': (21.262,150.519,60.731)
C8: (19.710,152.751,59.877)
O2': (24.205,151.218,60.182)
C6: (19.735,154.680,56.935)
C5: (19.860,153.846,58.063)
C4: (20.960,153.011,58.100)
P: (19.015,149.342,64.253)
C4': (21.913,150.774,62.002)
C2': (23.063,152.015,60.346)
C2: (21.712,153.758,56.182)
N1: (20.704,154.618,56.002)
N3: (21.930,152.913,57.182)
N6: (18.716,155.512,56.731)
N7: (19.075,153.673,59.195)
N9: (20.865,152.310,59.272)
O5': (20.189,149.540,63.196)
O3': (23.750,152.229,62.663)
Image (generated by PyMOL):
PyMOL image
show in jmol