Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A560:A882
Extra
PDB:
ATOM 1 O3' U A 559 -71.613 30.695 -38.281 1.00 6.37 O
ATOM 2 P U A 560 -70.486 30.404 -39.373 1.00 17.95 P
ATOM 3 OP1 U A 560 -71.101 30.638 -40.695 1.00 17.95 O
ATOM 4 OP2 U A 560 -69.934 29.066 -39.067 1.00 17.95 O
ATOM 5 O5' U A 560 -69.392 31.521 -39.101 1.00 17.95 O
ATOM 6 C5' U A 560 -68.638 31.529 -37.909 1.00 17.95 C
ATOM 7 C4' U A 560 -67.171 31.376 -38.183 1.00 17.95 C
ATOM 8 O4' U A 560 -66.576 30.699 -37.056 1.00 17.95 O
ATOM 9 C3' U A 560 -66.821 30.530 -39.395 1.00 17.95 C
ATOM 10 O3' U A 560 -65.510 30.881 -39.854 1.00 17.95 O
ATOM 11 C2' U A 560 -66.788 29.125 -38.798 1.00 17.95 C
ATOM 12 O2' U A 560 -66.035 28.188 -39.532 1.00 17.95 O
ATOM 13 C1' U A 560 -66.169 29.390 -37.430 1.00 17.95 C
ATOM 14 N1 U A 560 -66.619 28.466 -36.364 1.00 18.05 N
ATOM 15 C2 U A 560 -65.654 28.077 -35.464 1.00 18.05 C
ATOM 16 O2 U A 560 -64.469 28.411 -35.543 1.00 18.05 O
ATOM 17 N3 U A 560 -66.115 27.263 -34.464 1.00 18.05 N
ATOM 18 C4 U A 560 -67.390 26.821 -34.255 1.00 18.05 C
ATOM 19 O4 U A 560 -67.580 26.082 -33.282 1.00 18.05 O
ATOM 20 C5 U A 560 -68.340 27.286 -35.217 1.00 18.05 C
ATOM 21 C6 U A 560 -67.928 28.078 -36.208 1.00 18.05 C
ATOM 22 P A A 561 -65.290 32.037 -40.964 1.00 13.86 P
ATOM 23 OP1 A A 561 -66.376 31.897 -41.983 1.00 13.86 O
ATOM 24 OP2 A A 561 -63.881 31.940 -41.415 1.00 13.86 O
ATOM 25 O5' A A 561 -65.494 33.374 -40.124 1.00 13.86 O
TER
ATOM 1 O3' C B 881 -69.236 26.667 -26.288 1.00 5.42 O
ATOM 2 P U B 882 -69.311 25.517 -27.418 1.00 20.08 P
ATOM 3 OP1 U B 882 -70.154 24.424 -26.867 1.00 20.08 O
ATOM 4 OP2 U B 882 -67.917 25.210 -27.847 1.00 20.08 O
ATOM 5 O5' U B 882 -70.074 26.250 -28.587 1.00 20.08 O
ATOM 6 C5' U B 882 -71.180 27.074 -28.291 1.00 20.08 C
ATOM 7 C4' U B 882 -71.818 27.592 -29.528 1.00 20.08 C
ATOM 8 O4' U B 882 -71.049 28.714 -30.007 1.00 20.08 O
ATOM 9 C3' U B 882 -71.902 26.594 -30.674 1.00 20.08 C
ATOM 10 O3' U B 882 -73.194 26.681 -31.281 1.00 20.08 O
ATOM 11 C2' U B 882 -70.812 27.067 -31.644 1.00 20.08 C
ATOM 12 O2' U B 882 -71.060 26.776 -33.006 1.00 20.08 O
ATOM 13 C1' U B 882 -70.794 28.566 -31.379 1.00 20.08 C
ATOM 14 N1 U B 882 -69.509 29.231 -31.684 1.00 20.01 N
ATOM 15 C2 U B 882 -69.539 30.269 -32.577 1.00 20.01 C
ATOM 16 O2 U B 882 -70.565 30.641 -33.113 1.00 20.01 O
ATOM 17 N3 U B 882 -68.335 30.850 -32.833 1.00 20.01 N
ATOM 18 C4 U B 882 -67.109 30.533 -32.304 1.00 20.01 C
ATOM 19 O4 U B 882 -66.088 31.156 -32.647 1.00 20.01 O
ATOM 20 C5 U B 882 -67.171 29.460 -31.371 1.00 20.01 C
ATOM 21 C6 U B 882 -68.335 28.864 -31.102 1.00 20.01 C
ATOM 22 P G B 883 -74.098 25.358 -31.438 1.00 3.58 P
ATOM 23 OP1 G B 883 -73.229 24.218 -31.052 1.00 3.58 O
ATOM 24 OP2 G B 883 -74.686 25.401 -32.815 1.00 3.58 O
ATOM 25 O5' G B 883 -75.243 25.561 -30.351 1.00 3.58 O
TER
ATOM 2 P U A 560 -70.486 30.404 -39.373 1.00 17.95 P
ATOM 3 OP1 U A 560 -71.101 30.638 -40.695 1.00 17.95 O
ATOM 4 OP2 U A 560 -69.934 29.066 -39.067 1.00 17.95 O
ATOM 5 O5' U A 560 -69.392 31.521 -39.101 1.00 17.95 O
ATOM 6 C5' U A 560 -68.638 31.529 -37.909 1.00 17.95 C
ATOM 7 C4' U A 560 -67.171 31.376 -38.183 1.00 17.95 C
ATOM 8 O4' U A 560 -66.576 30.699 -37.056 1.00 17.95 O
ATOM 9 C3' U A 560 -66.821 30.530 -39.395 1.00 17.95 C
ATOM 10 O3' U A 560 -65.510 30.881 -39.854 1.00 17.95 O
ATOM 11 C2' U A 560 -66.788 29.125 -38.798 1.00 17.95 C
ATOM 12 O2' U A 560 -66.035 28.188 -39.532 1.00 17.95 O
ATOM 13 C1' U A 560 -66.169 29.390 -37.430 1.00 17.95 C
ATOM 14 N1 U A 560 -66.619 28.466 -36.364 1.00 18.05 N
ATOM 15 C2 U A 560 -65.654 28.077 -35.464 1.00 18.05 C
ATOM 16 O2 U A 560 -64.469 28.411 -35.543 1.00 18.05 O
ATOM 17 N3 U A 560 -66.115 27.263 -34.464 1.00 18.05 N
ATOM 18 C4 U A 560 -67.390 26.821 -34.255 1.00 18.05 C
ATOM 19 O4 U A 560 -67.580 26.082 -33.282 1.00 18.05 O
ATOM 20 C5 U A 560 -68.340 27.286 -35.217 1.00 18.05 C
ATOM 21 C6 U A 560 -67.928 28.078 -36.208 1.00 18.05 C
ATOM 22 P A A 561 -65.290 32.037 -40.964 1.00 13.86 P
ATOM 23 OP1 A A 561 -66.376 31.897 -41.983 1.00 13.86 O
ATOM 24 OP2 A A 561 -63.881 31.940 -41.415 1.00 13.86 O
ATOM 25 O5' A A 561 -65.494 33.374 -40.124 1.00 13.86 O
TER
ATOM 1 O3' C B 881 -69.236 26.667 -26.288 1.00 5.42 O
ATOM 2 P U B 882 -69.311 25.517 -27.418 1.00 20.08 P
ATOM 3 OP1 U B 882 -70.154 24.424 -26.867 1.00 20.08 O
ATOM 4 OP2 U B 882 -67.917 25.210 -27.847 1.00 20.08 O
ATOM 5 O5' U B 882 -70.074 26.250 -28.587 1.00 20.08 O
ATOM 6 C5' U B 882 -71.180 27.074 -28.291 1.00 20.08 C
ATOM 7 C4' U B 882 -71.818 27.592 -29.528 1.00 20.08 C
ATOM 8 O4' U B 882 -71.049 28.714 -30.007 1.00 20.08 O
ATOM 9 C3' U B 882 -71.902 26.594 -30.674 1.00 20.08 C
ATOM 10 O3' U B 882 -73.194 26.681 -31.281 1.00 20.08 O
ATOM 11 C2' U B 882 -70.812 27.067 -31.644 1.00 20.08 C
ATOM 12 O2' U B 882 -71.060 26.776 -33.006 1.00 20.08 O
ATOM 13 C1' U B 882 -70.794 28.566 -31.379 1.00 20.08 C
ATOM 14 N1 U B 882 -69.509 29.231 -31.684 1.00 20.01 N
ATOM 15 C2 U B 882 -69.539 30.269 -32.577 1.00 20.01 C
ATOM 16 O2 U B 882 -70.565 30.641 -33.113 1.00 20.01 O
ATOM 17 N3 U B 882 -68.335 30.850 -32.833 1.00 20.01 N
ATOM 18 C4 U B 882 -67.109 30.533 -32.304 1.00 20.01 C
ATOM 19 O4 U B 882 -66.088 31.156 -32.647 1.00 20.01 O
ATOM 20 C5 U B 882 -67.171 29.460 -31.371 1.00 20.01 C
ATOM 21 C6 U B 882 -68.335 28.864 -31.102 1.00 20.01 C
ATOM 22 P G B 883 -74.098 25.358 -31.438 1.00 3.58 P
ATOM 23 OP1 G B 883 -73.229 24.218 -31.052 1.00 3.58 O
ATOM 24 OP2 G B 883 -74.686 25.401 -32.815 1.00 3.58 O
ATOM 25 O5' G B 883 -75.243 25.561 -30.351 1.00 3.58 O
TER
Atoms:
C4: (-67.390,26.821,-34.255)
N3: (-66.115,27.263,-34.464)
OP1: (-71.101,30.638,-40.695)
OP2: (-69.934,29.066,-39.067)
C2: (-65.654,28.077,-35.464)
C1': (-66.169,29.390,-37.430)
C3': (-66.821,30.530,-39.395)
O5': (-69.392,31.521,-39.101)
O4': (-66.576,30.699,-37.056)
C5': (-68.638,31.529,-37.909)
P: (-70.486,30.404,-39.373)
C4': (-67.171,31.376,-38.183)
C2': (-66.788,29.125,-38.798)
O2': (-66.035,28.188,-39.532)
N1: (-66.619,28.466,-36.364)
O4: (-67.580,26.082,-33.282)
O2: (-64.469,28.411,-35.543)
C6: (-67.928,28.078,-36.208)
C5: (-68.340,27.286,-35.217)
O3': (-65.510,30.881,-39.854)
N3: (-66.115,27.263,-34.464)
OP1: (-71.101,30.638,-40.695)
OP2: (-69.934,29.066,-39.067)
C2: (-65.654,28.077,-35.464)
C1': (-66.169,29.390,-37.430)
C3': (-66.821,30.530,-39.395)
O5': (-69.392,31.521,-39.101)
O4': (-66.576,30.699,-37.056)
C5': (-68.638,31.529,-37.909)
P: (-70.486,30.404,-39.373)
C4': (-67.171,31.376,-38.183)
C2': (-66.788,29.125,-38.798)
O2': (-66.035,28.188,-39.532)
N1: (-66.619,28.466,-36.364)
O4: (-67.580,26.082,-33.282)
O2: (-64.469,28.411,-35.543)
C6: (-67.928,28.078,-36.208)
C5: (-68.340,27.286,-35.217)
O3': (-65.510,30.881,-39.854)
C4: (-67.109,30.533,-32.304)
N3: (-68.335,30.850,-32.833)
OP1: (-70.154,24.424,-26.867)
OP2: (-67.917,25.210,-27.847)
C2: (-69.539,30.269,-32.577)
C1': (-70.794,28.566,-31.379)
C3': (-71.902,26.594,-30.674)
O5': (-70.074,26.250,-28.587)
O4': (-71.049,28.714,-30.007)
C5': (-71.180,27.074,-28.291)
P: (-69.311,25.517,-27.418)
C4': (-71.818,27.592,-29.528)
C2': (-70.812,27.067,-31.644)
O2': (-71.060,26.776,-33.006)
N1: (-69.509,29.231,-31.684)
O4: (-66.088,31.156,-32.647)
O2: (-70.565,30.641,-33.113)
C6: (-68.335,28.864,-31.102)
C5: (-67.171,29.460,-31.371)
O3': (-73.194,26.681,-31.281)
N3: (-68.335,30.850,-32.833)
OP1: (-70.154,24.424,-26.867)
OP2: (-67.917,25.210,-27.847)
C2: (-69.539,30.269,-32.577)
C1': (-70.794,28.566,-31.379)
C3': (-71.902,26.594,-30.674)
O5': (-70.074,26.250,-28.587)
O4': (-71.049,28.714,-30.007)
C5': (-71.180,27.074,-28.291)
P: (-69.311,25.517,-27.418)
C4': (-71.818,27.592,-29.528)
C2': (-70.812,27.067,-31.644)
O2': (-71.060,26.776,-33.006)
N1: (-69.509,29.231,-31.684)
O4: (-66.088,31.156,-32.647)
O2: (-70.565,30.641,-33.113)
C6: (-68.335,28.864,-31.102)
C5: (-67.171,29.460,-31.371)
O3': (-73.194,26.681,-31.281)
Image (generated by PyMOL):