Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A560:A882
Extra
PDB:
ATOM 1 O3' U A 559 -23.880 75.130 80.422 1.00 10.85 O
ATOM 2 P U A 560 -23.046 74.027 81.160 1.00 15.97 P
ATOM 3 OP1 U A 560 -22.925 72.888 80.242 1.00 15.97 O
ATOM 4 OP2 U A 560 -23.683 73.814 82.461 1.00 15.97 O
ATOM 5 O5' U A 560 -21.653 74.735 81.342 1.00 15.97 O
ATOM 6 C5' U A 560 -20.656 74.619 80.352 1.00 15.97 C
ATOM 7 C4' U A 560 -19.319 74.585 80.990 1.00 15.97 C
ATOM 8 O4' U A 560 -19.094 75.870 81.621 1.00 15.97 O
ATOM 9 C3' U A 560 -19.202 73.560 82.098 1.00 15.97 C
ATOM 10 O3' U A 560 -17.841 73.162 82.234 1.00 15.97 O
ATOM 11 C2' U A 560 -19.636 74.356 83.315 1.00 15.97 C
ATOM 12 O2' U A 560 -19.204 73.832 84.549 1.00 15.97 O
ATOM 13 C1' U A 560 -19.000 75.704 83.018 1.00 15.97 C
ATOM 14 N1 U A 560 -19.676 76.844 83.670 1.00 15.63 N
ATOM 15 C2 U A 560 -18.925 77.610 84.572 1.00 15.63 C
ATOM 16 O2 U A 560 -17.743 77.395 84.833 1.00 15.63 O
ATOM 17 N3 U A 560 -19.606 78.647 85.157 1.00 15.63 N
ATOM 18 C4 U A 560 -20.913 78.976 84.934 1.00 15.63 C
ATOM 19 O4 U A 560 -21.361 79.928 85.534 1.00 15.63 O
ATOM 20 C5 U A 560 -21.632 78.163 84.000 1.00 15.63 C
ATOM 21 C6 U A 560 -21.001 77.135 83.404 1.00 15.63 C
ATOM 22 P A A 561 -17.327 71.845 81.471 1.00 18.11 P
ATOM 23 OP1 A A 561 -18.480 70.907 81.450 1.00 18.11 O
ATOM 24 OP2 A A 561 -16.062 71.400 82.113 1.00 18.11 O
ATOM 25 O5' A A 561 -17.018 72.391 80.003 1.00 18.11 O
TER
ATOM 1 O3' C B 881 -22.725 87.045 84.373 1.00 8.54 O
ATOM 2 P U B 882 -23.140 86.121 85.593 1.00 12.10 P
ATOM 3 OP1 U B 882 -24.187 86.849 86.377 1.00 12.10 O
ATOM 4 OP2 U B 882 -21.865 85.709 86.266 1.00 12.10 O
ATOM 5 O5' U B 882 -23.785 84.879 84.853 1.00 12.10 O
ATOM 6 C5' U B 882 -24.581 85.063 83.696 1.00 12.10 C
ATOM 7 C4' U B 882 -25.076 83.745 83.186 1.00 12.10 C
ATOM 8 O4' U B 882 -24.065 83.159 82.339 1.00 12.10 O
ATOM 9 C3' U B 882 -25.376 82.719 84.265 1.00 12.10 C
ATOM 10 O3' U B 882 -26.542 82.002 83.927 1.00 12.10 O
ATOM 11 C2' U B 882 -24.185 81.789 84.232 1.00 12.10 C
ATOM 12 O2' U B 882 -24.486 80.471 84.635 1.00 12.10 O
ATOM 13 C1' U B 882 -23.782 81.853 82.764 1.00 12.10 C
ATOM 14 N1 U B 882 -22.353 81.604 82.528 1.00 11.96 N
ATOM 15 C2 U B 882 -21.977 80.720 81.550 1.00 11.96 C
ATOM 16 O2 U B 882 -22.812 80.152 80.884 1.00 11.96 O
ATOM 17 N3 U B 882 -20.631 80.533 81.387 1.00 11.96 N
ATOM 18 C4 U B 882 -19.646 81.139 82.119 1.00 11.96 C
ATOM 19 O4 U B 882 -18.470 80.904 81.924 1.00 11.96 O
ATOM 20 C5 U B 882 -20.105 82.053 83.096 1.00 11.96 C
ATOM 21 C6 U B 882 -21.415 82.256 83.269 1.00 11.96 C
ATOM 22 P G B 883 -27.774 82.025 84.941 1.00 7.88 P
ATOM 23 OP1 G B 883 -27.224 82.403 86.261 1.00 7.88 O
ATOM 24 OP2 G B 883 -28.480 80.716 84.808 1.00 7.88 O
ATOM 25 O5' G B 883 -28.686 83.214 84.381 1.00 7.88 O
TER
ATOM 2 P U A 560 -23.046 74.027 81.160 1.00 15.97 P
ATOM 3 OP1 U A 560 -22.925 72.888 80.242 1.00 15.97 O
ATOM 4 OP2 U A 560 -23.683 73.814 82.461 1.00 15.97 O
ATOM 5 O5' U A 560 -21.653 74.735 81.342 1.00 15.97 O
ATOM 6 C5' U A 560 -20.656 74.619 80.352 1.00 15.97 C
ATOM 7 C4' U A 560 -19.319 74.585 80.990 1.00 15.97 C
ATOM 8 O4' U A 560 -19.094 75.870 81.621 1.00 15.97 O
ATOM 9 C3' U A 560 -19.202 73.560 82.098 1.00 15.97 C
ATOM 10 O3' U A 560 -17.841 73.162 82.234 1.00 15.97 O
ATOM 11 C2' U A 560 -19.636 74.356 83.315 1.00 15.97 C
ATOM 12 O2' U A 560 -19.204 73.832 84.549 1.00 15.97 O
ATOM 13 C1' U A 560 -19.000 75.704 83.018 1.00 15.97 C
ATOM 14 N1 U A 560 -19.676 76.844 83.670 1.00 15.63 N
ATOM 15 C2 U A 560 -18.925 77.610 84.572 1.00 15.63 C
ATOM 16 O2 U A 560 -17.743 77.395 84.833 1.00 15.63 O
ATOM 17 N3 U A 560 -19.606 78.647 85.157 1.00 15.63 N
ATOM 18 C4 U A 560 -20.913 78.976 84.934 1.00 15.63 C
ATOM 19 O4 U A 560 -21.361 79.928 85.534 1.00 15.63 O
ATOM 20 C5 U A 560 -21.632 78.163 84.000 1.00 15.63 C
ATOM 21 C6 U A 560 -21.001 77.135 83.404 1.00 15.63 C
ATOM 22 P A A 561 -17.327 71.845 81.471 1.00 18.11 P
ATOM 23 OP1 A A 561 -18.480 70.907 81.450 1.00 18.11 O
ATOM 24 OP2 A A 561 -16.062 71.400 82.113 1.00 18.11 O
ATOM 25 O5' A A 561 -17.018 72.391 80.003 1.00 18.11 O
TER
ATOM 1 O3' C B 881 -22.725 87.045 84.373 1.00 8.54 O
ATOM 2 P U B 882 -23.140 86.121 85.593 1.00 12.10 P
ATOM 3 OP1 U B 882 -24.187 86.849 86.377 1.00 12.10 O
ATOM 4 OP2 U B 882 -21.865 85.709 86.266 1.00 12.10 O
ATOM 5 O5' U B 882 -23.785 84.879 84.853 1.00 12.10 O
ATOM 6 C5' U B 882 -24.581 85.063 83.696 1.00 12.10 C
ATOM 7 C4' U B 882 -25.076 83.745 83.186 1.00 12.10 C
ATOM 8 O4' U B 882 -24.065 83.159 82.339 1.00 12.10 O
ATOM 9 C3' U B 882 -25.376 82.719 84.265 1.00 12.10 C
ATOM 10 O3' U B 882 -26.542 82.002 83.927 1.00 12.10 O
ATOM 11 C2' U B 882 -24.185 81.789 84.232 1.00 12.10 C
ATOM 12 O2' U B 882 -24.486 80.471 84.635 1.00 12.10 O
ATOM 13 C1' U B 882 -23.782 81.853 82.764 1.00 12.10 C
ATOM 14 N1 U B 882 -22.353 81.604 82.528 1.00 11.96 N
ATOM 15 C2 U B 882 -21.977 80.720 81.550 1.00 11.96 C
ATOM 16 O2 U B 882 -22.812 80.152 80.884 1.00 11.96 O
ATOM 17 N3 U B 882 -20.631 80.533 81.387 1.00 11.96 N
ATOM 18 C4 U B 882 -19.646 81.139 82.119 1.00 11.96 C
ATOM 19 O4 U B 882 -18.470 80.904 81.924 1.00 11.96 O
ATOM 20 C5 U B 882 -20.105 82.053 83.096 1.00 11.96 C
ATOM 21 C6 U B 882 -21.415 82.256 83.269 1.00 11.96 C
ATOM 22 P G B 883 -27.774 82.025 84.941 1.00 7.88 P
ATOM 23 OP1 G B 883 -27.224 82.403 86.261 1.00 7.88 O
ATOM 24 OP2 G B 883 -28.480 80.716 84.808 1.00 7.88 O
ATOM 25 O5' G B 883 -28.686 83.214 84.381 1.00 7.88 O
TER
Atoms:
C4: (-20.913,78.976,84.934)
N3: (-19.606,78.647,85.157)
OP1: (-22.925,72.888,80.242)
OP2: (-23.683,73.814,82.461)
C2: (-18.925,77.610,84.572)
C1': (-19.000,75.704,83.018)
C3': (-19.202,73.560,82.098)
O5': (-21.653,74.735,81.342)
O4': (-19.094,75.870,81.621)
C5': (-20.656,74.619,80.352)
P: (-23.046,74.027,81.160)
C4': (-19.319,74.585,80.990)
C2': (-19.636,74.356,83.315)
O2': (-19.204,73.832,84.549)
N1: (-19.676,76.844,83.670)
O4: (-21.361,79.928,85.534)
O2: (-17.743,77.395,84.833)
C6: (-21.001,77.135,83.404)
C5: (-21.632,78.163,84.000)
O3': (-17.841,73.162,82.234)
N3: (-19.606,78.647,85.157)
OP1: (-22.925,72.888,80.242)
OP2: (-23.683,73.814,82.461)
C2: (-18.925,77.610,84.572)
C1': (-19.000,75.704,83.018)
C3': (-19.202,73.560,82.098)
O5': (-21.653,74.735,81.342)
O4': (-19.094,75.870,81.621)
C5': (-20.656,74.619,80.352)
P: (-23.046,74.027,81.160)
C4': (-19.319,74.585,80.990)
C2': (-19.636,74.356,83.315)
O2': (-19.204,73.832,84.549)
N1: (-19.676,76.844,83.670)
O4: (-21.361,79.928,85.534)
O2: (-17.743,77.395,84.833)
C6: (-21.001,77.135,83.404)
C5: (-21.632,78.163,84.000)
O3': (-17.841,73.162,82.234)
C4: (-19.646,81.139,82.119)
N3: (-20.631,80.533,81.387)
OP1: (-24.187,86.849,86.377)
OP2: (-21.865,85.709,86.266)
C2: (-21.977,80.720,81.550)
C1': (-23.782,81.853,82.764)
C3': (-25.376,82.719,84.265)
O5': (-23.785,84.879,84.853)
O4': (-24.065,83.159,82.339)
C5': (-24.581,85.063,83.696)
P: (-23.140,86.121,85.593)
C4': (-25.076,83.745,83.186)
C2': (-24.185,81.789,84.232)
O2': (-24.486,80.471,84.635)
N1: (-22.353,81.604,82.528)
O4: (-18.470,80.904,81.924)
O2: (-22.812,80.152,80.884)
C6: (-21.415,82.256,83.269)
C5: (-20.105,82.053,83.096)
O3': (-26.542,82.002,83.927)
N3: (-20.631,80.533,81.387)
OP1: (-24.187,86.849,86.377)
OP2: (-21.865,85.709,86.266)
C2: (-21.977,80.720,81.550)
C1': (-23.782,81.853,82.764)
C3': (-25.376,82.719,84.265)
O5': (-23.785,84.879,84.853)
O4': (-24.065,83.159,82.339)
C5': (-24.581,85.063,83.696)
P: (-23.140,86.121,85.593)
C4': (-25.076,83.745,83.186)
C2': (-24.185,81.789,84.232)
O2': (-24.486,80.471,84.635)
N1: (-22.353,81.604,82.528)
O4: (-18.470,80.904,81.924)
O2: (-22.812,80.152,80.884)
C6: (-21.415,82.256,83.269)
C5: (-20.105,82.053,83.096)
O3': (-26.542,82.002,83.927)
Image (generated by PyMOL):