Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2472:A2470
Extra
PDB:
ATOM 1 O3' A A2471 -104.039 -54.555 -43.714 1.00 4.33 O
ATOM 2 P U A2472 -103.924 -54.765 -42.127 1.00 0.01 P
ATOM 3 OP1 U A2472 -102.735 -55.602 -41.896 1.00 0.01 O
ATOM 4 OP2 U A2472 -105.224 -55.240 -41.636 1.00 0.01 O
ATOM 5 O5' U A2472 -103.669 -53.311 -41.595 1.00 0.01 O
ATOM 6 C5' U A2472 -102.662 -52.507 -42.167 1.00 0.01 C
ATOM 7 C4' U A2472 -102.701 -51.135 -41.597 1.00 0.01 C
ATOM 8 O4' U A2472 -103.612 -50.322 -42.358 1.00 0.01 O
ATOM 9 C3' U A2472 -103.220 -51.065 -40.196 1.00 0.01 C
ATOM 10 O3' U A2472 -102.218 -51.341 -39.268 1.00 0.01 O
ATOM 11 C2' U A2472 -103.750 -49.661 -40.114 1.00 0.01 C
ATOM 12 O2' U A2472 -102.696 -48.743 -39.974 1.00 0.01 O
ATOM 13 C1' U A2472 -104.347 -49.503 -41.496 1.00 0.01 C
ATOM 14 N1 U A2472 -105.725 -49.955 -41.523 1.00 0.21 N
ATOM 15 C2 U A2472 -106.652 -49.091 -41.072 1.00 0.21 C
ATOM 16 O2 U A2472 -106.319 -47.999 -40.701 1.00 0.21 O
ATOM 17 N3 U A2472 -107.929 -49.556 -41.071 1.00 0.21 N
ATOM 18 C4 U A2472 -108.361 -50.799 -41.482 1.00 0.21 C
ATOM 19 O4 U A2472 -109.566 -51.106 -41.455 1.00 0.21 O
ATOM 20 C5 U A2472 -107.306 -51.647 -41.926 1.00 0.21 C
ATOM 21 C6 U A2472 -106.048 -51.207 -41.923 1.00 0.21 C
ATOM 22 P C A2473 -102.586 -51.758 -37.772 1.00 0.01 P
ATOM 23 OP1 C A2473 -101.298 -52.018 -37.091 1.00 0.01 O
ATOM 24 OP2 C A2473 -103.595 -52.842 -37.845 1.00 0.01 O
ATOM 25 O5' C A2473 -103.261 -50.453 -37.184 1.00 0.01 O
TER
ATOM 1 O3' A B2469 -114.458 -52.029 -42.927 1.00 8.19 O
ATOM 2 P U B2470 -113.783 -53.191 -43.772 1.00 6.46 P
ATOM 3 OP1 U B2470 -112.981 -52.566 -44.848 1.00 6.46 O
ATOM 4 OP2 U B2470 -114.873 -54.122 -44.145 1.00 6.46 O
ATOM 5 O5' U B2470 -112.816 -53.857 -42.715 1.00 6.46 O
ATOM 6 C5' U B2470 -111.752 -53.108 -42.163 1.00 6.46 C
ATOM 7 C4' U B2470 -110.984 -53.917 -41.165 1.00 6.46 C
ATOM 8 O4' U B2470 -111.845 -54.238 -40.056 1.00 6.46 O
ATOM 9 C3' U B2470 -110.478 -55.255 -41.668 1.00 6.46 C
ATOM 10 O3' U B2470 -109.216 -55.149 -42.237 1.00 6.46 O
ATOM 11 C2' U B2470 -110.472 -56.123 -40.439 1.00 6.46 C
ATOM 12 O2' U B2470 -109.277 -55.926 -39.704 1.00 6.46 O
ATOM 13 C1' U B2470 -111.641 -55.562 -39.647 1.00 6.46 C
ATOM 14 N1 U B2470 -112.868 -56.311 -39.889 1.00 6.65 N
ATOM 15 C2 U B2470 -112.832 -57.516 -39.296 1.00 6.65 C
ATOM 16 O2 U B2470 -111.851 -57.850 -38.683 1.00 6.65 O
ATOM 17 N3 U B2470 -113.932 -58.290 -39.445 1.00 6.65 N
ATOM 18 C4 U B2470 -115.042 -57.947 -40.146 1.00 6.65 C
ATOM 19 O4 U B2470 -115.929 -58.787 -40.182 1.00 6.65 O
ATOM 20 C5 U B2470 -115.018 -56.653 -40.753 1.00 6.65 C
ATOM 21 C6 U B2470 -113.943 -55.885 -40.605 1.00 6.65 C
ATOM 22 P A B2471 -108.945 -55.776 -43.659 1.00 4.33 P
ATOM 23 OP1 A B2471 -110.082 -55.403 -44.534 1.00 4.33 O
ATOM 24 OP2 A B2471 -108.647 -57.208 -43.454 1.00 4.33 O
ATOM 25 O5' A B2471 -107.644 -55.000 -44.110 1.00 4.33 O
TER
ATOM 2 P U A2472 -103.924 -54.765 -42.127 1.00 0.01 P
ATOM 3 OP1 U A2472 -102.735 -55.602 -41.896 1.00 0.01 O
ATOM 4 OP2 U A2472 -105.224 -55.240 -41.636 1.00 0.01 O
ATOM 5 O5' U A2472 -103.669 -53.311 -41.595 1.00 0.01 O
ATOM 6 C5' U A2472 -102.662 -52.507 -42.167 1.00 0.01 C
ATOM 7 C4' U A2472 -102.701 -51.135 -41.597 1.00 0.01 C
ATOM 8 O4' U A2472 -103.612 -50.322 -42.358 1.00 0.01 O
ATOM 9 C3' U A2472 -103.220 -51.065 -40.196 1.00 0.01 C
ATOM 10 O3' U A2472 -102.218 -51.341 -39.268 1.00 0.01 O
ATOM 11 C2' U A2472 -103.750 -49.661 -40.114 1.00 0.01 C
ATOM 12 O2' U A2472 -102.696 -48.743 -39.974 1.00 0.01 O
ATOM 13 C1' U A2472 -104.347 -49.503 -41.496 1.00 0.01 C
ATOM 14 N1 U A2472 -105.725 -49.955 -41.523 1.00 0.21 N
ATOM 15 C2 U A2472 -106.652 -49.091 -41.072 1.00 0.21 C
ATOM 16 O2 U A2472 -106.319 -47.999 -40.701 1.00 0.21 O
ATOM 17 N3 U A2472 -107.929 -49.556 -41.071 1.00 0.21 N
ATOM 18 C4 U A2472 -108.361 -50.799 -41.482 1.00 0.21 C
ATOM 19 O4 U A2472 -109.566 -51.106 -41.455 1.00 0.21 O
ATOM 20 C5 U A2472 -107.306 -51.647 -41.926 1.00 0.21 C
ATOM 21 C6 U A2472 -106.048 -51.207 -41.923 1.00 0.21 C
ATOM 22 P C A2473 -102.586 -51.758 -37.772 1.00 0.01 P
ATOM 23 OP1 C A2473 -101.298 -52.018 -37.091 1.00 0.01 O
ATOM 24 OP2 C A2473 -103.595 -52.842 -37.845 1.00 0.01 O
ATOM 25 O5' C A2473 -103.261 -50.453 -37.184 1.00 0.01 O
TER
ATOM 1 O3' A B2469 -114.458 -52.029 -42.927 1.00 8.19 O
ATOM 2 P U B2470 -113.783 -53.191 -43.772 1.00 6.46 P
ATOM 3 OP1 U B2470 -112.981 -52.566 -44.848 1.00 6.46 O
ATOM 4 OP2 U B2470 -114.873 -54.122 -44.145 1.00 6.46 O
ATOM 5 O5' U B2470 -112.816 -53.857 -42.715 1.00 6.46 O
ATOM 6 C5' U B2470 -111.752 -53.108 -42.163 1.00 6.46 C
ATOM 7 C4' U B2470 -110.984 -53.917 -41.165 1.00 6.46 C
ATOM 8 O4' U B2470 -111.845 -54.238 -40.056 1.00 6.46 O
ATOM 9 C3' U B2470 -110.478 -55.255 -41.668 1.00 6.46 C
ATOM 10 O3' U B2470 -109.216 -55.149 -42.237 1.00 6.46 O
ATOM 11 C2' U B2470 -110.472 -56.123 -40.439 1.00 6.46 C
ATOM 12 O2' U B2470 -109.277 -55.926 -39.704 1.00 6.46 O
ATOM 13 C1' U B2470 -111.641 -55.562 -39.647 1.00 6.46 C
ATOM 14 N1 U B2470 -112.868 -56.311 -39.889 1.00 6.65 N
ATOM 15 C2 U B2470 -112.832 -57.516 -39.296 1.00 6.65 C
ATOM 16 O2 U B2470 -111.851 -57.850 -38.683 1.00 6.65 O
ATOM 17 N3 U B2470 -113.932 -58.290 -39.445 1.00 6.65 N
ATOM 18 C4 U B2470 -115.042 -57.947 -40.146 1.00 6.65 C
ATOM 19 O4 U B2470 -115.929 -58.787 -40.182 1.00 6.65 O
ATOM 20 C5 U B2470 -115.018 -56.653 -40.753 1.00 6.65 C
ATOM 21 C6 U B2470 -113.943 -55.885 -40.605 1.00 6.65 C
ATOM 22 P A B2471 -108.945 -55.776 -43.659 1.00 4.33 P
ATOM 23 OP1 A B2471 -110.082 -55.403 -44.534 1.00 4.33 O
ATOM 24 OP2 A B2471 -108.647 -57.208 -43.454 1.00 4.33 O
ATOM 25 O5' A B2471 -107.644 -55.000 -44.110 1.00 4.33 O
TER
Atoms:
C4: (-108.361,-50.799,-41.482)
N3: (-107.929,-49.556,-41.071)
OP1: (-102.735,-55.602,-41.896)
OP2: (-105.224,-55.240,-41.636)
C2: (-106.652,-49.091,-41.072)
C1': (-104.347,-49.503,-41.496)
C3': (-103.220,-51.065,-40.196)
O5': (-103.669,-53.311,-41.595)
O4': (-103.612,-50.322,-42.358)
C5': (-102.662,-52.507,-42.167)
P: (-103.924,-54.765,-42.127)
C4': (-102.701,-51.135,-41.597)
C2': (-103.750,-49.661,-40.114)
O2': (-102.696,-48.743,-39.974)
N1: (-105.725,-49.955,-41.523)
O4: (-109.566,-51.106,-41.455)
O2: (-106.319,-47.999,-40.701)
C6: (-106.048,-51.207,-41.923)
C5: (-107.306,-51.647,-41.926)
O3': (-102.218,-51.341,-39.268)
N3: (-107.929,-49.556,-41.071)
OP1: (-102.735,-55.602,-41.896)
OP2: (-105.224,-55.240,-41.636)
C2: (-106.652,-49.091,-41.072)
C1': (-104.347,-49.503,-41.496)
C3': (-103.220,-51.065,-40.196)
O5': (-103.669,-53.311,-41.595)
O4': (-103.612,-50.322,-42.358)
C5': (-102.662,-52.507,-42.167)
P: (-103.924,-54.765,-42.127)
C4': (-102.701,-51.135,-41.597)
C2': (-103.750,-49.661,-40.114)
O2': (-102.696,-48.743,-39.974)
N1: (-105.725,-49.955,-41.523)
O4: (-109.566,-51.106,-41.455)
O2: (-106.319,-47.999,-40.701)
C6: (-106.048,-51.207,-41.923)
C5: (-107.306,-51.647,-41.926)
O3': (-102.218,-51.341,-39.268)
C4: (-115.042,-57.947,-40.146)
N3: (-113.932,-58.290,-39.445)
OP1: (-112.981,-52.566,-44.848)
OP2: (-114.873,-54.122,-44.145)
C2: (-112.832,-57.516,-39.296)
C1': (-111.641,-55.562,-39.647)
C3': (-110.478,-55.255,-41.668)
O5': (-112.816,-53.857,-42.715)
O4': (-111.845,-54.238,-40.056)
C5': (-111.752,-53.108,-42.163)
P: (-113.783,-53.191,-43.772)
C4': (-110.984,-53.917,-41.165)
C2': (-110.472,-56.123,-40.439)
O2': (-109.277,-55.926,-39.704)
N1: (-112.868,-56.311,-39.889)
O4: (-115.929,-58.787,-40.182)
O2: (-111.851,-57.850,-38.683)
C6: (-113.943,-55.885,-40.605)
C5: (-115.018,-56.653,-40.753)
O3': (-109.216,-55.149,-42.237)
N3: (-113.932,-58.290,-39.445)
OP1: (-112.981,-52.566,-44.848)
OP2: (-114.873,-54.122,-44.145)
C2: (-112.832,-57.516,-39.296)
C1': (-111.641,-55.562,-39.647)
C3': (-110.478,-55.255,-41.668)
O5': (-112.816,-53.857,-42.715)
O4': (-111.845,-54.238,-40.056)
C5': (-111.752,-53.108,-42.163)
P: (-113.783,-53.191,-43.772)
C4': (-110.984,-53.917,-41.165)
C2': (-110.472,-56.123,-40.439)
O2': (-109.277,-55.926,-39.704)
N1: (-112.868,-56.311,-39.889)
O4: (-115.929,-58.787,-40.182)
O2: (-111.851,-57.850,-38.683)
C6: (-113.943,-55.885,-40.605)
C5: (-115.018,-56.653,-40.753)
O3': (-109.216,-55.149,-42.237)
Image (generated by PyMOL):