Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A685:A463
Extra
PDB:
ATOM 1 O3' A A 684 -42.813 -40.928 28.379 1.00 0.01 O
ATOM 2 P U A 685 -41.240 -40.723 28.575 1.00 0.01 P
ATOM 3 OP1 U A 685 -40.870 -41.226 29.904 1.00 0.01 O
ATOM 4 OP2 U A 685 -40.934 -39.294 28.224 1.00 0.01 O
ATOM 5 O5' U A 685 -40.666 -41.658 27.483 1.00 0.01 O
ATOM 6 C5' U A 685 -41.049 -42.996 27.379 1.00 0.01 C
ATOM 7 C4' U A 685 -40.045 -43.678 26.537 1.00 0.01 C
ATOM 8 O4' U A 685 -39.194 -44.487 27.363 1.00 0.01 O
ATOM 9 C3' U A 685 -40.564 -44.563 25.417 1.00 0.01 C
ATOM 10 O3' U A 685 -39.825 -44.288 24.219 1.00 0.01 O
ATOM 11 C2' U A 685 -40.192 -45.949 25.913 1.00 0.01 C
ATOM 12 O2' U A 685 -39.968 -46.873 24.889 1.00 0.01 O
ATOM 13 C1' U A 685 -38.918 -45.641 26.673 1.00 0.01 C
ATOM 14 N1 U A 685 -38.472 -46.655 27.615 1.00 0.01 N
ATOM 15 C2 U A 685 -37.225 -46.394 28.042 1.00 0.01 C
ATOM 16 O2 U A 685 -36.679 -45.395 27.673 1.00 0.01 O
ATOM 17 N3 U A 685 -36.670 -47.296 28.875 1.00 0.01 N
ATOM 18 C4 U A 685 -37.268 -48.431 29.326 1.00 0.01 C
ATOM 19 O4 U A 685 -36.674 -49.177 30.093 1.00 0.01 O
ATOM 20 C5 U A 685 -38.576 -48.644 28.831 1.00 0.01 C
ATOM 21 C6 U A 685 -39.124 -47.768 28.005 1.00 0.01 C
ATOM 22 P C A 686 -40.131 -42.990 23.313 1.00 0.01 P
ATOM 23 OP1 C A 686 -38.974 -42.773 22.437 1.00 0.01 O
ATOM 24 OP2 C A 686 -40.532 -41.918 24.208 1.00 0.01 O
ATOM 25 O5' C A 686 -41.367 -43.459 22.448 1.00 0.01 O
TER
ATOM 1 O3' G B 462 -43.926 -54.668 26.731 1.00 1.36 O
ATOM 2 P U B 463 -42.528 -54.000 26.307 1.00 0.01 P
ATOM 3 OP1 U B 463 -42.816 -52.860 25.407 1.00 0.01 O
ATOM 4 OP2 U B 463 -41.655 -55.070 25.830 1.00 0.01 O
ATOM 5 O5' U B 463 -41.993 -53.480 27.676 1.00 0.01 O
ATOM 6 C5' U B 463 -40.626 -53.169 27.840 1.00 0.01 C
ATOM 7 C4' U B 463 -40.442 -52.124 28.894 1.00 0.01 C
ATOM 8 O4' U B 463 -41.143 -50.928 28.512 1.00 0.01 O
ATOM 9 C3' U B 463 -40.999 -52.477 30.240 1.00 0.01 C
ATOM 10 O3' U B 463 -40.087 -53.248 30.983 1.00 0.01 O
ATOM 11 C2' U B 463 -41.276 -51.127 30.851 1.00 0.01 C
ATOM 12 O2' U B 463 -40.086 -50.605 31.411 1.00 0.01 O
ATOM 13 C1' U B 463 -41.654 -50.290 29.630 1.00 0.01 C
ATOM 14 N1 U B 463 -43.084 -50.163 29.443 1.00 0.01 N
ATOM 15 C2 U B 463 -43.782 -49.457 30.353 1.00 0.01 C
ATOM 16 O2 U B 463 -43.236 -48.980 31.330 1.00 0.01 O
ATOM 17 N3 U B 463 -45.124 -49.368 30.090 1.00 0.01 N
ATOM 18 C4 U B 463 -45.795 -49.898 29.017 1.00 0.01 C
ATOM 19 O4 U B 463 -47.009 -49.753 28.907 1.00 0.01 O
ATOM 20 C5 U B 463 -44.973 -50.585 28.104 1.00 0.01 C
ATOM 21 C6 U B 463 -43.677 -50.670 28.343 1.00 0.01 C
ATOM 22 P G B 464 -40.607 -54.408 31.930 1.00 0.01 P
ATOM 23 OP1 G B 464 -39.437 -54.920 32.643 1.00 0.01 O
ATOM 24 OP2 G B 464 -41.385 -55.331 31.110 1.00 0.01 O
ATOM 25 O5' G B 464 -41.569 -53.620 32.919 1.00 0.01 O
TER
ATOM 2 P U A 685 -41.240 -40.723 28.575 1.00 0.01 P
ATOM 3 OP1 U A 685 -40.870 -41.226 29.904 1.00 0.01 O
ATOM 4 OP2 U A 685 -40.934 -39.294 28.224 1.00 0.01 O
ATOM 5 O5' U A 685 -40.666 -41.658 27.483 1.00 0.01 O
ATOM 6 C5' U A 685 -41.049 -42.996 27.379 1.00 0.01 C
ATOM 7 C4' U A 685 -40.045 -43.678 26.537 1.00 0.01 C
ATOM 8 O4' U A 685 -39.194 -44.487 27.363 1.00 0.01 O
ATOM 9 C3' U A 685 -40.564 -44.563 25.417 1.00 0.01 C
ATOM 10 O3' U A 685 -39.825 -44.288 24.219 1.00 0.01 O
ATOM 11 C2' U A 685 -40.192 -45.949 25.913 1.00 0.01 C
ATOM 12 O2' U A 685 -39.968 -46.873 24.889 1.00 0.01 O
ATOM 13 C1' U A 685 -38.918 -45.641 26.673 1.00 0.01 C
ATOM 14 N1 U A 685 -38.472 -46.655 27.615 1.00 0.01 N
ATOM 15 C2 U A 685 -37.225 -46.394 28.042 1.00 0.01 C
ATOM 16 O2 U A 685 -36.679 -45.395 27.673 1.00 0.01 O
ATOM 17 N3 U A 685 -36.670 -47.296 28.875 1.00 0.01 N
ATOM 18 C4 U A 685 -37.268 -48.431 29.326 1.00 0.01 C
ATOM 19 O4 U A 685 -36.674 -49.177 30.093 1.00 0.01 O
ATOM 20 C5 U A 685 -38.576 -48.644 28.831 1.00 0.01 C
ATOM 21 C6 U A 685 -39.124 -47.768 28.005 1.00 0.01 C
ATOM 22 P C A 686 -40.131 -42.990 23.313 1.00 0.01 P
ATOM 23 OP1 C A 686 -38.974 -42.773 22.437 1.00 0.01 O
ATOM 24 OP2 C A 686 -40.532 -41.918 24.208 1.00 0.01 O
ATOM 25 O5' C A 686 -41.367 -43.459 22.448 1.00 0.01 O
TER
ATOM 1 O3' G B 462 -43.926 -54.668 26.731 1.00 1.36 O
ATOM 2 P U B 463 -42.528 -54.000 26.307 1.00 0.01 P
ATOM 3 OP1 U B 463 -42.816 -52.860 25.407 1.00 0.01 O
ATOM 4 OP2 U B 463 -41.655 -55.070 25.830 1.00 0.01 O
ATOM 5 O5' U B 463 -41.993 -53.480 27.676 1.00 0.01 O
ATOM 6 C5' U B 463 -40.626 -53.169 27.840 1.00 0.01 C
ATOM 7 C4' U B 463 -40.442 -52.124 28.894 1.00 0.01 C
ATOM 8 O4' U B 463 -41.143 -50.928 28.512 1.00 0.01 O
ATOM 9 C3' U B 463 -40.999 -52.477 30.240 1.00 0.01 C
ATOM 10 O3' U B 463 -40.087 -53.248 30.983 1.00 0.01 O
ATOM 11 C2' U B 463 -41.276 -51.127 30.851 1.00 0.01 C
ATOM 12 O2' U B 463 -40.086 -50.605 31.411 1.00 0.01 O
ATOM 13 C1' U B 463 -41.654 -50.290 29.630 1.00 0.01 C
ATOM 14 N1 U B 463 -43.084 -50.163 29.443 1.00 0.01 N
ATOM 15 C2 U B 463 -43.782 -49.457 30.353 1.00 0.01 C
ATOM 16 O2 U B 463 -43.236 -48.980 31.330 1.00 0.01 O
ATOM 17 N3 U B 463 -45.124 -49.368 30.090 1.00 0.01 N
ATOM 18 C4 U B 463 -45.795 -49.898 29.017 1.00 0.01 C
ATOM 19 O4 U B 463 -47.009 -49.753 28.907 1.00 0.01 O
ATOM 20 C5 U B 463 -44.973 -50.585 28.104 1.00 0.01 C
ATOM 21 C6 U B 463 -43.677 -50.670 28.343 1.00 0.01 C
ATOM 22 P G B 464 -40.607 -54.408 31.930 1.00 0.01 P
ATOM 23 OP1 G B 464 -39.437 -54.920 32.643 1.00 0.01 O
ATOM 24 OP2 G B 464 -41.385 -55.331 31.110 1.00 0.01 O
ATOM 25 O5' G B 464 -41.569 -53.620 32.919 1.00 0.01 O
TER
Atoms:
C4: (-37.268,-48.431,29.326)
N3: (-36.670,-47.296,28.875)
OP1: (-40.870,-41.226,29.904)
OP2: (-40.934,-39.294,28.224)
C2: (-37.225,-46.394,28.042)
C1': (-38.918,-45.641,26.673)
C3': (-40.564,-44.563,25.417)
O5': (-40.666,-41.658,27.483)
O4': (-39.194,-44.487,27.363)
C5': (-41.049,-42.996,27.379)
P: (-41.240,-40.723,28.575)
C4': (-40.045,-43.678,26.537)
C2': (-40.192,-45.949,25.913)
O2': (-39.968,-46.873,24.889)
N1: (-38.472,-46.655,27.615)
O4: (-36.674,-49.177,30.093)
O2: (-36.679,-45.395,27.673)
C6: (-39.124,-47.768,28.005)
C5: (-38.576,-48.644,28.831)
O3': (-39.825,-44.288,24.219)
N3: (-36.670,-47.296,28.875)
OP1: (-40.870,-41.226,29.904)
OP2: (-40.934,-39.294,28.224)
C2: (-37.225,-46.394,28.042)
C1': (-38.918,-45.641,26.673)
C3': (-40.564,-44.563,25.417)
O5': (-40.666,-41.658,27.483)
O4': (-39.194,-44.487,27.363)
C5': (-41.049,-42.996,27.379)
P: (-41.240,-40.723,28.575)
C4': (-40.045,-43.678,26.537)
C2': (-40.192,-45.949,25.913)
O2': (-39.968,-46.873,24.889)
N1: (-38.472,-46.655,27.615)
O4: (-36.674,-49.177,30.093)
O2: (-36.679,-45.395,27.673)
C6: (-39.124,-47.768,28.005)
C5: (-38.576,-48.644,28.831)
O3': (-39.825,-44.288,24.219)
C4: (-45.795,-49.898,29.017)
N3: (-45.124,-49.368,30.090)
OP1: (-42.816,-52.860,25.407)
OP2: (-41.655,-55.070,25.830)
C2: (-43.782,-49.457,30.353)
C1': (-41.654,-50.290,29.630)
C3': (-40.999,-52.477,30.240)
O5': (-41.993,-53.480,27.676)
O4': (-41.143,-50.928,28.512)
C5': (-40.626,-53.169,27.840)
P: (-42.528,-54.000,26.307)
C4': (-40.442,-52.124,28.894)
C2': (-41.276,-51.127,30.851)
O2': (-40.086,-50.605,31.411)
N1: (-43.084,-50.163,29.443)
O4: (-47.009,-49.753,28.907)
O2: (-43.236,-48.980,31.330)
C6: (-43.677,-50.670,28.343)
C5: (-44.973,-50.585,28.104)
O3': (-40.087,-53.248,30.983)
N3: (-45.124,-49.368,30.090)
OP1: (-42.816,-52.860,25.407)
OP2: (-41.655,-55.070,25.830)
C2: (-43.782,-49.457,30.353)
C1': (-41.654,-50.290,29.630)
C3': (-40.999,-52.477,30.240)
O5': (-41.993,-53.480,27.676)
O4': (-41.143,-50.928,28.512)
C5': (-40.626,-53.169,27.840)
P: (-42.528,-54.000,26.307)
C4': (-40.442,-52.124,28.894)
C2': (-41.276,-51.127,30.851)
O2': (-40.086,-50.605,31.411)
N1: (-43.084,-50.163,29.443)
O4: (-47.009,-49.753,28.907)
O2: (-43.236,-48.980,31.330)
C6: (-43.677,-50.670,28.343)
C5: (-44.973,-50.585,28.104)
O3': (-40.087,-53.248,30.983)
Image (generated by PyMOL):