ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:21360:21359

Extra

PDB:
ATOM 1 O3' U A1359 -113.034 -70.839 61.820 1.00119.29 O
ATOM 2 P U A1360 -112.952 -70.449 63.403 1.00105.90 P
ATOM 3 OP1 U A1360 -114.331 -70.470 63.944 1.00107.00 O
ATOM 4 OP2 U A1360 -112.177 -69.189 63.509 1.00105.00 O
ATOM 5 O5' U A1360 -112.109 -71.643 64.034 1.00105.82 O
ATOM 6 C5' U A1360 -111.786 -71.636 65.415 1.00105.90 C
ATOM 7 C4' U A1360 -110.639 -72.555 65.717 1.00105.49 C
ATOM 8 O4' U A1360 -111.058 -73.931 65.551 1.00106.20 O
ATOM 9 C3' U A1360 -109.434 -72.431 64.811 1.00104.44 C
ATOM 10 O3' U A1360 -108.599 -71.340 65.140 1.00103.61 O
ATOM 11 C2' U A1360 -108.773 -73.792 64.963 1.00104.50 C
ATOM 12 O2' U A1360 -108.086 -73.890 66.197 1.00104.38 O
ATOM 13 C1' U A1360 -109.999 -74.696 65.024 1.00105.63 C
ATOM 14 N1 U A1360 -110.395 -75.161 63.685 1.00105.75 N
ATOM 15 C2 U A1360 -109.584 -76.108 63.067 1.00105.40 C
ATOM 16 O2 U A1360 -108.584 -76.577 63.583 1.00105.04 O
ATOM 17 N3 U A1360 -110.000 -76.489 61.815 1.00105.54 N
ATOM 18 C4 U A1360 -111.118 -76.012 61.150 1.00105.98 C
ATOM 19 O4 U A1360 -111.360 -76.451 60.030 1.00106.07 O
ATOM 20 C5 U A1360 -111.897 -75.028 61.851 1.00106.32 C
ATOM 21 C6 U A1360 -111.519 -74.641 63.073 1.00106.19 C
ATOM 22 P C A1361 -108.123 -70.330 63.994 1.00 98.64 P
ATOM 23 OP1 C A1361 -108.081 -68.968 64.583 1.00 98.31 O
ATOM 24 OP2 C A1361 -108.990 -70.568 62.821 1.00 99.05 O
ATOM 25 O5' C A1361 -106.653 -70.842 63.696 1.00 97.80 O
TER

ATOM 1 O3' C B1358 -118.651 -73.934 60.102 1.00116.06 O
ATOM 2 P U B1359 -118.473 -72.347 59.970 1.00123.35 P
ATOM 3 OP1 U B1359 -119.174 -71.737 61.123 1.00123.91 O
ATOM 4 OP2 U B1359 -118.907 -71.975 58.590 1.00123.34 O
ATOM 5 O5' U B1359 -116.890 -72.156 60.121 1.00122.14 O
ATOM 6 C5' U B1359 -116.168 -72.789 61.180 1.00122.00 C
ATOM 7 C4' U B1359 -114.681 -72.480 61.133 1.00120.82 C
ATOM 8 O4' U B1359 -114.107 -73.020 59.910 1.00120.35 O
ATOM 9 C3' U B1359 -114.308 -70.999 61.152 1.00120.11 C
ATOM 10 O3' U B1359 -113.034 -70.839 61.820 1.00119.29 O
ATOM 11 C2' U B1359 -114.164 -70.698 59.653 1.00119.66 C
ATOM 12 O2' U B1359 -113.406 -69.552 59.342 1.00118.74 O
ATOM 13 C1' U B1359 -113.500 -71.981 59.162 1.00119.48 C
ATOM 14 N1 U B1359 -113.700 -72.286 57.719 1.00119.48 N
ATOM 15 C2 U B1359 -112.634 -72.875 57.036 1.00118.80 C
ATOM 16 O2 U B1359 -111.557 -73.092 57.564 1.00118.21 O
ATOM 17 N3 U B1359 -112.855 -73.198 55.708 1.00118.85 N
ATOM 18 C4 U B1359 -114.033 -73.016 55.001 1.00119.53 C
ATOM 19 O4 U B1359 -114.099 -73.351 53.810 1.00119.52 O
ATOM 20 C5 U B1359 -115.089 -72.418 55.776 1.00120.22 C
ATOM 21 C6 U B1359 -114.904 -72.089 57.071 1.00120.18 C
ATOM 22 P U B1360 -112.952 -70.449 63.403 1.00105.90 P
ATOM 23 OP1 U B1360 -114.331 -70.470 63.944 1.00107.00 O
ATOM 24 OP2 U B1360 -112.177 -69.189 63.509 1.00105.00 O
ATOM 25 O5' U B1360 -112.109 -71.643 64.034 1.00105.82 O
TER

Atoms:
C4: (-111.118,-76.012,61.150)
N3: (-110.000,-76.489,61.815)
OP1: (-114.331,-70.470,63.944)
OP2: (-112.177,-69.189,63.509)
C2: (-109.584,-76.108,63.067)
C1': (-109.999,-74.696,65.024)
C3': (-109.434,-72.431,64.811)
O5': (-112.109,-71.643,64.034)
O4': (-111.058,-73.931,65.551)
C5': (-111.786,-71.636,65.415)
P: (-112.952,-70.449,63.403)
C4': (-110.639,-72.555,65.717)
C2': (-108.773,-73.792,64.963)
O2': (-108.086,-73.890,66.197)
N1: (-110.395,-75.161,63.685)
O4: (-111.360,-76.451,60.030)
O2: (-108.584,-76.577,63.583)
C6: (-111.519,-74.641,63.073)
C5: (-111.897,-75.028,61.851)
O3': (-108.599,-71.340,65.140)
C4: (-114.033,-73.016,55.001)
N3: (-112.855,-73.198,55.708)
OP1: (-119.174,-71.737,61.123)
OP2: (-118.907,-71.975,58.590)
C2: (-112.634,-72.875,57.036)
C1': (-113.500,-71.981,59.162)
C3': (-114.308,-70.999,61.152)
O5': (-116.890,-72.156,60.121)
O4': (-114.107,-73.020,59.910)
C5': (-116.168,-72.789,61.180)
P: (-118.473,-72.347,59.970)
C4': (-114.681,-72.480,61.133)
C2': (-114.164,-70.698,59.653)
O2': (-113.406,-69.552,59.342)
N1: (-113.700,-72.286,57.719)
O4: (-114.099,-73.351,53.810)
O2: (-111.557,-73.092,57.564)
C6: (-114.904,-72.089,57.071)
C5: (-115.089,-72.418,55.776)
O3': (-113.034,-70.839,61.820)
Image (generated by PyMOL):
PyMOL image
show in jmol