Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11026:11025
Extra
PDB:
ATOM 1 O3' U A1025 54.624 -90.847 41.037 1.00110.32 O
ATOM 2 P U A1026 54.781 -91.185 39.471 1.00 96.50 P
ATOM 3 OP1 U A1026 53.529 -91.892 39.036 1.00 96.88 O
ATOM 4 OP2 U A1026 56.085 -91.892 39.296 1.00 97.00 O
ATOM 5 O5' U A1026 54.847 -89.707 38.830 1.00 95.84 O
ATOM 6 C5' U A1026 54.463 -88.561 39.597 1.00 95.08 C
ATOM 7 C4' U A1026 53.033 -88.116 39.309 1.00 94.82 C
ATOM 8 O4' U A1026 52.142 -88.569 40.370 1.00 94.81 O
ATOM 9 C3' U A1026 52.814 -86.609 39.252 1.00 94.06 C
ATOM 10 O3' U A1026 53.077 -86.073 37.977 1.00 94.04 O
ATOM 11 C2' U A1026 51.366 -86.435 39.676 1.00 93.82 C
ATOM 12 O2' U A1026 50.499 -86.670 38.578 1.00 94.10 O
ATOM 13 C1' U A1026 51.198 -87.561 40.688 1.00 94.19 C
ATOM 14 N1 U A1026 51.432 -87.115 42.106 1.00 93.73 N
ATOM 15 C2 U A1026 50.811 -86.057 42.752 1.00 93.07 C
ATOM 16 O2 U A1026 50.019 -85.301 42.241 1.00 92.74 O
ATOM 17 N3 U A1026 51.162 -85.852 44.064 1.00 92.77 N
ATOM 18 C4 U A1026 52.047 -86.595 44.805 1.00 93.08 C
ATOM 19 O4 U A1026 52.286 -86.326 45.967 1.00 92.79 O
ATOM 20 C5 U A1026 52.637 -87.662 44.106 1.00 93.75 C
ATOM 21 C6 U A1026 52.306 -87.868 42.838 1.00 94.04 C
ATOM 22 P G A1027 54.018 -84.778 37.821 1.00 69.03 P
ATOM 23 OP1 G A1027 53.784 -84.250 36.407 1.00 69.04 O
ATOM 24 OP2 G A1027 55.395 -85.194 38.239 1.00 69.24 O
ATOM 25 O5' G A1027 53.409 -83.739 38.902 1.00 68.28 O
TER
ATOM 1 O3' A B1024 52.131 -92.676 44.133 1.00 71.36 O
ATOM 2 P U B1025 52.541 -91.878 45.465 1.00110.02 P
ATOM 3 OP1 U B1025 51.900 -92.555 46.610 1.00110.18 O
ATOM 4 OP2 U B1025 52.258 -90.464 45.232 1.00109.29 O
ATOM 5 O5' U B1025 54.092 -92.107 45.520 1.00110.23 O
ATOM 6 C5' U B1025 54.794 -92.428 44.338 1.00110.63 C
ATOM 7 C4' U B1025 54.772 -91.281 43.376 1.00110.17 C
ATOM 8 O4' U B1025 55.534 -90.200 43.939 1.00109.56 O
ATOM 9 C3' U B1025 55.361 -91.567 42.012 1.00110.58 C
ATOM 10 O3' U B1025 54.624 -90.847 41.037 1.00110.32 O
ATOM 11 C2' U B1025 56.794 -91.025 42.096 1.00110.39 C
ATOM 12 O2' U B1025 57.254 -90.405 40.917 1.00110.29 O
ATOM 13 C1' U B1025 56.762 -90.028 43.255 1.00109.67 C
ATOM 14 N1 U B1025 57.843 -90.276 44.235 1.00109.74 N
ATOM 15 C2 U B1025 58.654 -89.282 44.775 1.00109.21 C
ATOM 16 O2 U B1025 58.573 -88.084 44.507 1.00108.62 O
ATOM 17 N3 U B1025 59.575 -89.811 45.678 1.00109.44 N
ATOM 18 C4 U B1025 59.774 -91.156 46.072 1.00110.11 C
ATOM 19 O4 U B1025 60.650 -91.489 46.892 1.00110.26 O
ATOM 20 C5 U B1025 58.895 -92.096 45.456 1.00110.61 C
ATOM 21 C6 U B1025 58.007 -91.613 44.591 1.00110.41 C
ATOM 22 P U B1026 54.781 -91.185 39.471 1.00 96.50 P
ATOM 23 OP1 U B1026 53.529 -91.892 39.036 1.00 96.88 O
ATOM 24 OP2 U B1026 56.085 -91.892 39.296 1.00 97.00 O
ATOM 25 O5' U B1026 54.847 -89.707 38.830 1.00 95.84 O
TER
ATOM 2 P U A1026 54.781 -91.185 39.471 1.00 96.50 P
ATOM 3 OP1 U A1026 53.529 -91.892 39.036 1.00 96.88 O
ATOM 4 OP2 U A1026 56.085 -91.892 39.296 1.00 97.00 O
ATOM 5 O5' U A1026 54.847 -89.707 38.830 1.00 95.84 O
ATOM 6 C5' U A1026 54.463 -88.561 39.597 1.00 95.08 C
ATOM 7 C4' U A1026 53.033 -88.116 39.309 1.00 94.82 C
ATOM 8 O4' U A1026 52.142 -88.569 40.370 1.00 94.81 O
ATOM 9 C3' U A1026 52.814 -86.609 39.252 1.00 94.06 C
ATOM 10 O3' U A1026 53.077 -86.073 37.977 1.00 94.04 O
ATOM 11 C2' U A1026 51.366 -86.435 39.676 1.00 93.82 C
ATOM 12 O2' U A1026 50.499 -86.670 38.578 1.00 94.10 O
ATOM 13 C1' U A1026 51.198 -87.561 40.688 1.00 94.19 C
ATOM 14 N1 U A1026 51.432 -87.115 42.106 1.00 93.73 N
ATOM 15 C2 U A1026 50.811 -86.057 42.752 1.00 93.07 C
ATOM 16 O2 U A1026 50.019 -85.301 42.241 1.00 92.74 O
ATOM 17 N3 U A1026 51.162 -85.852 44.064 1.00 92.77 N
ATOM 18 C4 U A1026 52.047 -86.595 44.805 1.00 93.08 C
ATOM 19 O4 U A1026 52.286 -86.326 45.967 1.00 92.79 O
ATOM 20 C5 U A1026 52.637 -87.662 44.106 1.00 93.75 C
ATOM 21 C6 U A1026 52.306 -87.868 42.838 1.00 94.04 C
ATOM 22 P G A1027 54.018 -84.778 37.821 1.00 69.03 P
ATOM 23 OP1 G A1027 53.784 -84.250 36.407 1.00 69.04 O
ATOM 24 OP2 G A1027 55.395 -85.194 38.239 1.00 69.24 O
ATOM 25 O5' G A1027 53.409 -83.739 38.902 1.00 68.28 O
TER
ATOM 1 O3' A B1024 52.131 -92.676 44.133 1.00 71.36 O
ATOM 2 P U B1025 52.541 -91.878 45.465 1.00110.02 P
ATOM 3 OP1 U B1025 51.900 -92.555 46.610 1.00110.18 O
ATOM 4 OP2 U B1025 52.258 -90.464 45.232 1.00109.29 O
ATOM 5 O5' U B1025 54.092 -92.107 45.520 1.00110.23 O
ATOM 6 C5' U B1025 54.794 -92.428 44.338 1.00110.63 C
ATOM 7 C4' U B1025 54.772 -91.281 43.376 1.00110.17 C
ATOM 8 O4' U B1025 55.534 -90.200 43.939 1.00109.56 O
ATOM 9 C3' U B1025 55.361 -91.567 42.012 1.00110.58 C
ATOM 10 O3' U B1025 54.624 -90.847 41.037 1.00110.32 O
ATOM 11 C2' U B1025 56.794 -91.025 42.096 1.00110.39 C
ATOM 12 O2' U B1025 57.254 -90.405 40.917 1.00110.29 O
ATOM 13 C1' U B1025 56.762 -90.028 43.255 1.00109.67 C
ATOM 14 N1 U B1025 57.843 -90.276 44.235 1.00109.74 N
ATOM 15 C2 U B1025 58.654 -89.282 44.775 1.00109.21 C
ATOM 16 O2 U B1025 58.573 -88.084 44.507 1.00108.62 O
ATOM 17 N3 U B1025 59.575 -89.811 45.678 1.00109.44 N
ATOM 18 C4 U B1025 59.774 -91.156 46.072 1.00110.11 C
ATOM 19 O4 U B1025 60.650 -91.489 46.892 1.00110.26 O
ATOM 20 C5 U B1025 58.895 -92.096 45.456 1.00110.61 C
ATOM 21 C6 U B1025 58.007 -91.613 44.591 1.00110.41 C
ATOM 22 P U B1026 54.781 -91.185 39.471 1.00 96.50 P
ATOM 23 OP1 U B1026 53.529 -91.892 39.036 1.00 96.88 O
ATOM 24 OP2 U B1026 56.085 -91.892 39.296 1.00 97.00 O
ATOM 25 O5' U B1026 54.847 -89.707 38.830 1.00 95.84 O
TER
Atoms:
C4: (52.047,-86.595,44.805)
N3: (51.162,-85.852,44.064)
OP1: (53.529,-91.892,39.036)
OP2: (56.085,-91.892,39.296)
C2: (50.811,-86.057,42.752)
C1': (51.198,-87.561,40.688)
C3': (52.814,-86.609,39.252)
O5': (54.847,-89.707,38.830)
O4': (52.142,-88.569,40.370)
C5': (54.463,-88.561,39.597)
P: (54.781,-91.185,39.471)
C4': (53.033,-88.116,39.309)
C2': (51.366,-86.435,39.676)
O2': (50.499,-86.670,38.578)
N1: (51.432,-87.115,42.106)
O4: (52.286,-86.326,45.967)
O2: (50.019,-85.301,42.241)
C6: (52.306,-87.868,42.838)
C5: (52.637,-87.662,44.106)
O3': (53.077,-86.073,37.977)
N3: (51.162,-85.852,44.064)
OP1: (53.529,-91.892,39.036)
OP2: (56.085,-91.892,39.296)
C2: (50.811,-86.057,42.752)
C1': (51.198,-87.561,40.688)
C3': (52.814,-86.609,39.252)
O5': (54.847,-89.707,38.830)
O4': (52.142,-88.569,40.370)
C5': (54.463,-88.561,39.597)
P: (54.781,-91.185,39.471)
C4': (53.033,-88.116,39.309)
C2': (51.366,-86.435,39.676)
O2': (50.499,-86.670,38.578)
N1: (51.432,-87.115,42.106)
O4: (52.286,-86.326,45.967)
O2: (50.019,-85.301,42.241)
C6: (52.306,-87.868,42.838)
C5: (52.637,-87.662,44.106)
O3': (53.077,-86.073,37.977)
C4: (59.774,-91.156,46.072)
N3: (59.575,-89.811,45.678)
OP1: (51.900,-92.555,46.610)
OP2: (52.258,-90.464,45.232)
C2: (58.654,-89.282,44.775)
C1': (56.762,-90.028,43.255)
C3': (55.361,-91.567,42.012)
O5': (54.092,-92.107,45.520)
O4': (55.534,-90.200,43.939)
C5': (54.794,-92.428,44.338)
P: (52.541,-91.878,45.465)
C4': (54.772,-91.281,43.376)
C2': (56.794,-91.025,42.096)
O2': (57.254,-90.405,40.917)
N1: (57.843,-90.276,44.235)
O4: (60.650,-91.489,46.892)
O2: (58.573,-88.084,44.507)
C6: (58.007,-91.613,44.591)
C5: (58.895,-92.096,45.456)
O3': (54.624,-90.847,41.037)
N3: (59.575,-89.811,45.678)
OP1: (51.900,-92.555,46.610)
OP2: (52.258,-90.464,45.232)
C2: (58.654,-89.282,44.775)
C1': (56.762,-90.028,43.255)
C3': (55.361,-91.567,42.012)
O5': (54.092,-92.107,45.520)
O4': (55.534,-90.200,43.939)
C5': (54.794,-92.428,44.338)
P: (52.541,-91.878,45.465)
C4': (54.772,-91.281,43.376)
C2': (56.794,-91.025,42.096)
O2': (57.254,-90.405,40.917)
N1: (57.843,-90.276,44.235)
O4: (60.650,-91.489,46.892)
O2: (58.573,-88.084,44.507)
C6: (58.007,-91.613,44.591)
C5: (58.895,-92.096,45.456)
O3': (54.624,-90.847,41.037)
Image (generated by PyMOL):