Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11401:11821
Extra
PDB:
ATOM 1 O3' A A1400 37.077 51.219 89.467 1.00 53.56 O
ATOM 2 P U A1401 38.400 50.511 88.870 1.00 53.92 P
ATOM 3 OP1 U A1401 37.969 49.267 88.145 1.00 53.34 O
ATOM 4 OP2 U A1401 39.332 50.381 90.010 1.00 54.04 O
ATOM 5 O5' U A1401 38.944 51.580 87.814 1.00 54.14 O
ATOM 6 C5' U A1401 39.700 52.696 88.239 1.00 54.63 C
ATOM 7 C4' U A1401 38.999 54.004 87.954 1.00 55.12 C
ATOM 8 O4' U A1401 37.850 54.176 88.847 1.00 55.37 O
ATOM 9 C3' U A1401 39.837 55.257 88.184 1.00 55.65 C
ATOM 10 O3' U A1401 40.718 55.534 87.102 1.00 55.58 O
ATOM 11 C2' U A1401 38.773 56.328 88.441 1.00 56.16 C
ATOM 12 O2' U A1401 38.131 56.700 87.236 1.00 56.14 O
ATOM 13 C1' U A1401 37.762 55.535 89.263 1.00 56.00 C
ATOM 14 N1 U A1401 38.036 55.599 90.717 1.00 56.27 N
ATOM 15 C2 U A1401 37.985 56.805 91.361 1.00 56.89 C
ATOM 16 O2 U A1401 37.765 57.830 90.773 1.00 57.22 O
ATOM 17 N3 U A1401 38.218 56.804 92.711 1.00 57.14 N
ATOM 18 C4 U A1401 38.481 55.695 93.477 1.00 56.81 C
ATOM 19 O4 U A1401 38.676 55.842 94.685 1.00 57.11 O
ATOM 20 C5 U A1401 38.497 54.441 92.753 1.00 56.16 C
ATOM 21 C6 U A1401 38.273 54.438 91.431 1.00 55.91 C
ATOM 22 P U A1402 42.229 56.055 87.368 1.00 48.66 P
ATOM 23 OP1 U A1402 42.952 55.920 86.076 1.00 48.40 O
ATOM 24 OP2 U A1402 42.748 55.362 88.572 1.00 48.57 O
ATOM 25 O5' U A1402 42.016 57.579 87.701 1.00 49.36 O
TER
ATOM 1 O3' U B1820 38.549 48.191 100.547 1.00 58.68 O
ATOM 2 P U B1821 39.943 48.810 100.054 1.00 55.80 P
ATOM 3 OP1 U B1821 40.833 47.659 99.739 1.00 55.30 O
ATOM 4 OP2 U B1821 40.401 49.804 101.061 1.00 56.41 O
ATOM 5 O5' U B1821 39.501 49.542 98.718 1.00 55.77 O
ATOM 6 C5' U B1821 38.885 48.814 97.682 1.00 55.27 C
ATOM 7 C4' U B1821 38.175 49.727 96.736 1.00 55.42 C
ATOM 8 O4' U B1821 37.181 50.471 97.450 1.00 55.88 O
ATOM 9 C3' U B1821 39.024 50.801 96.083 1.00 55.68 C
ATOM 10 O3' U B1821 39.763 50.325 94.972 1.00 55.25 O
ATOM 11 C2' U B1821 37.999 51.855 95.704 1.00 56.02 C
ATOM 12 O2' U B1821 37.406 51.545 94.450 1.00 55.66 O
ATOM 13 C1' U B1821 36.948 51.689 96.803 1.00 56.22 C
ATOM 14 N1 U B1821 37.026 52.738 97.790 1.00 56.84 N
ATOM 15 C2 U B1821 36.550 53.993 97.438 1.00 57.28 C
ATOM 16 O2 U B1821 36.096 54.264 96.355 1.00 57.17 O
ATOM 17 N3 U B1821 36.629 54.925 98.412 1.00 57.88 N
ATOM 18 C4 U B1821 37.146 54.697 99.667 1.00 58.06 C
ATOM 19 O4 U B1821 37.158 55.643 100.443 1.00 58.64 O
ATOM 20 C5 U B1821 37.611 53.378 99.967 1.00 57.59 C
ATOM 21 C6 U B1821 37.540 52.436 99.029 1.00 56.99 C
ATOM 22 P G B1822 41.364 50.369 94.988 1.00 69.21 P
ATOM 23 OP1 G B1822 41.791 51.343 96.029 1.00 69.80 O
ATOM 24 OP2 G B1822 41.800 50.568 93.575 1.00 68.99 O
ATOM 25 O5' G B1822 41.725 48.931 95.452 1.00 68.76 O
TER
ATOM 2 P U A1401 38.400 50.511 88.870 1.00 53.92 P
ATOM 3 OP1 U A1401 37.969 49.267 88.145 1.00 53.34 O
ATOM 4 OP2 U A1401 39.332 50.381 90.010 1.00 54.04 O
ATOM 5 O5' U A1401 38.944 51.580 87.814 1.00 54.14 O
ATOM 6 C5' U A1401 39.700 52.696 88.239 1.00 54.63 C
ATOM 7 C4' U A1401 38.999 54.004 87.954 1.00 55.12 C
ATOM 8 O4' U A1401 37.850 54.176 88.847 1.00 55.37 O
ATOM 9 C3' U A1401 39.837 55.257 88.184 1.00 55.65 C
ATOM 10 O3' U A1401 40.718 55.534 87.102 1.00 55.58 O
ATOM 11 C2' U A1401 38.773 56.328 88.441 1.00 56.16 C
ATOM 12 O2' U A1401 38.131 56.700 87.236 1.00 56.14 O
ATOM 13 C1' U A1401 37.762 55.535 89.263 1.00 56.00 C
ATOM 14 N1 U A1401 38.036 55.599 90.717 1.00 56.27 N
ATOM 15 C2 U A1401 37.985 56.805 91.361 1.00 56.89 C
ATOM 16 O2 U A1401 37.765 57.830 90.773 1.00 57.22 O
ATOM 17 N3 U A1401 38.218 56.804 92.711 1.00 57.14 N
ATOM 18 C4 U A1401 38.481 55.695 93.477 1.00 56.81 C
ATOM 19 O4 U A1401 38.676 55.842 94.685 1.00 57.11 O
ATOM 20 C5 U A1401 38.497 54.441 92.753 1.00 56.16 C
ATOM 21 C6 U A1401 38.273 54.438 91.431 1.00 55.91 C
ATOM 22 P U A1402 42.229 56.055 87.368 1.00 48.66 P
ATOM 23 OP1 U A1402 42.952 55.920 86.076 1.00 48.40 O
ATOM 24 OP2 U A1402 42.748 55.362 88.572 1.00 48.57 O
ATOM 25 O5' U A1402 42.016 57.579 87.701 1.00 49.36 O
TER
ATOM 1 O3' U B1820 38.549 48.191 100.547 1.00 58.68 O
ATOM 2 P U B1821 39.943 48.810 100.054 1.00 55.80 P
ATOM 3 OP1 U B1821 40.833 47.659 99.739 1.00 55.30 O
ATOM 4 OP2 U B1821 40.401 49.804 101.061 1.00 56.41 O
ATOM 5 O5' U B1821 39.501 49.542 98.718 1.00 55.77 O
ATOM 6 C5' U B1821 38.885 48.814 97.682 1.00 55.27 C
ATOM 7 C4' U B1821 38.175 49.727 96.736 1.00 55.42 C
ATOM 8 O4' U B1821 37.181 50.471 97.450 1.00 55.88 O
ATOM 9 C3' U B1821 39.024 50.801 96.083 1.00 55.68 C
ATOM 10 O3' U B1821 39.763 50.325 94.972 1.00 55.25 O
ATOM 11 C2' U B1821 37.999 51.855 95.704 1.00 56.02 C
ATOM 12 O2' U B1821 37.406 51.545 94.450 1.00 55.66 O
ATOM 13 C1' U B1821 36.948 51.689 96.803 1.00 56.22 C
ATOM 14 N1 U B1821 37.026 52.738 97.790 1.00 56.84 N
ATOM 15 C2 U B1821 36.550 53.993 97.438 1.00 57.28 C
ATOM 16 O2 U B1821 36.096 54.264 96.355 1.00 57.17 O
ATOM 17 N3 U B1821 36.629 54.925 98.412 1.00 57.88 N
ATOM 18 C4 U B1821 37.146 54.697 99.667 1.00 58.06 C
ATOM 19 O4 U B1821 37.158 55.643 100.443 1.00 58.64 O
ATOM 20 C5 U B1821 37.611 53.378 99.967 1.00 57.59 C
ATOM 21 C6 U B1821 37.540 52.436 99.029 1.00 56.99 C
ATOM 22 P G B1822 41.364 50.369 94.988 1.00 69.21 P
ATOM 23 OP1 G B1822 41.791 51.343 96.029 1.00 69.80 O
ATOM 24 OP2 G B1822 41.800 50.568 93.575 1.00 68.99 O
ATOM 25 O5' G B1822 41.725 48.931 95.452 1.00 68.76 O
TER
Atoms:
C4: (38.481,55.695,93.477)
N3: (38.218,56.804,92.711)
OP1: (37.969,49.267,88.145)
OP2: (39.332,50.381,90.010)
C2: (37.985,56.805,91.361)
C1': (37.762,55.535,89.263)
C3': (39.837,55.257,88.184)
O5': (38.944,51.580,87.814)
O4': (37.850,54.176,88.847)
C5': (39.700,52.696,88.239)
P: (38.400,50.511,88.870)
C4': (38.999,54.004,87.954)
C2': (38.773,56.328,88.441)
O2': (38.131,56.700,87.236)
N1: (38.036,55.599,90.717)
O4: (38.676,55.842,94.685)
O2: (37.765,57.830,90.773)
C6: (38.273,54.438,91.431)
C5: (38.497,54.441,92.753)
O3': (40.718,55.534,87.102)
N3: (38.218,56.804,92.711)
OP1: (37.969,49.267,88.145)
OP2: (39.332,50.381,90.010)
C2: (37.985,56.805,91.361)
C1': (37.762,55.535,89.263)
C3': (39.837,55.257,88.184)
O5': (38.944,51.580,87.814)
O4': (37.850,54.176,88.847)
C5': (39.700,52.696,88.239)
P: (38.400,50.511,88.870)
C4': (38.999,54.004,87.954)
C2': (38.773,56.328,88.441)
O2': (38.131,56.700,87.236)
N1: (38.036,55.599,90.717)
O4: (38.676,55.842,94.685)
O2: (37.765,57.830,90.773)
C6: (38.273,54.438,91.431)
C5: (38.497,54.441,92.753)
O3': (40.718,55.534,87.102)
C4: (37.146,54.697,99.667)
N3: (36.629,54.925,98.412)
OP1: (40.833,47.659,99.739)
OP2: (40.401,49.804,101.061)
C2: (36.550,53.993,97.438)
C1': (36.948,51.689,96.803)
C3': (39.024,50.801,96.083)
O5': (39.501,49.542,98.718)
O4': (37.181,50.471,97.450)
C5': (38.885,48.814,97.682)
P: (39.943,48.810,100.054)
C4': (38.175,49.727,96.736)
C2': (37.999,51.855,95.704)
O2': (37.406,51.545,94.450)
N1: (37.026,52.738,97.790)
O4: (37.158,55.643,100.443)
O2: (36.096,54.264,96.355)
C6: (37.540,52.436,99.029)
C5: (37.611,53.378,99.967)
O3': (39.763,50.325,94.972)
N3: (36.629,54.925,98.412)
OP1: (40.833,47.659,99.739)
OP2: (40.401,49.804,101.061)
C2: (36.550,53.993,97.438)
C1': (36.948,51.689,96.803)
C3': (39.024,50.801,96.083)
O5': (39.501,49.542,98.718)
O4': (37.181,50.471,97.450)
C5': (38.885,48.814,97.682)
P: (39.943,48.810,100.054)
C4': (38.175,49.727,96.736)
C2': (37.999,51.855,95.704)
O2': (37.406,51.545,94.450)
N1: (37.026,52.738,97.790)
O4: (37.158,55.643,100.443)
O2: (36.096,54.264,96.355)
C6: (37.540,52.436,99.029)
C5: (37.611,53.378,99.967)
O3': (39.763,50.325,94.972)
Image (generated by PyMOL):