Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11948:11944
Extra
PDB:
ATOM 1 O3' U A1947 19.151 15.896 83.461 1.00 39.43 O
ATOM 2 P U A1948 17.960 15.372 84.426 1.00 38.98 P
ATOM 3 OP1 U A1948 17.121 16.467 84.698 1.00 39.29 O
ATOM 4 OP2 U A1948 18.586 14.692 85.511 1.00 38.93 O
ATOM 5 O5' U A1948 17.156 14.324 83.537 1.00 38.80 O
ATOM 6 C5' U A1948 16.162 14.748 82.629 1.00 38.89 C
ATOM 7 C4' U A1948 14.993 13.841 82.670 1.00 38.89 C
ATOM 8 O4' U A1948 15.436 12.477 82.627 1.00 38.63 O
ATOM 9 C3' U A1948 14.170 13.932 83.924 1.00 39.13 C
ATOM 10 O3' U A1948 13.222 14.990 83.864 1.00 39.42 O
ATOM 11 C2' U A1948 13.543 12.538 84.066 1.00 39.01 C
ATOM 12 O2' U A1948 12.291 12.480 83.440 1.00 39.10 O
ATOM 13 C1' U A1948 14.519 11.648 83.300 1.00 38.68 C
ATOM 14 N1 U A1948 15.266 10.735 84.184 1.00 38.55 N
ATOM 15 C2 U A1948 15.237 9.403 83.842 1.00 38.34 C
ATOM 16 O2 U A1948 14.640 9.020 82.859 1.00 38.27 O
ATOM 17 N3 U A1948 15.977 8.591 84.654 1.00 38.24 N
ATOM 18 C4 U A1948 16.693 8.992 85.760 1.00 38.33 C
ATOM 19 O4 U A1948 17.304 8.168 86.432 1.00 38.24 O
ATOM 20 C5 U A1948 16.666 10.365 86.062 1.00 38.55 C
ATOM 21 C6 U A1948 15.964 11.166 85.277 1.00 38.65 C
ATOM 22 P A A1949 13.264 16.155 84.963 1.00 42.43 P
ATOM 23 OP1 A A1949 13.020 17.416 84.283 1.00 42.61 O
ATOM 24 OP2 A A1949 14.512 16.010 85.710 1.00 42.33 O
ATOM 25 O5' A A1949 12.067 15.769 85.916 1.00 42.63 O
TER
ATOM 1 O3' C B1943 16.187 11.643 95.282 1.00 42.54 O
ATOM 2 P U B1944 17.275 12.499 94.491 1.00 39.05 P
ATOM 3 OP1 U B1944 18.466 12.518 95.298 1.00 39.08 O
ATOM 4 OP2 U B1944 16.676 13.741 94.113 1.00 39.24 O
ATOM 5 O5' U B1944 17.538 11.646 93.215 1.00 38.68 O
ATOM 6 C5' U B1944 18.194 10.390 93.307 1.00 38.45 C
ATOM 7 C4' U B1944 18.381 9.811 91.958 1.00 38.14 C
ATOM 8 O4' U B1944 17.114 9.330 91.449 1.00 38.13 O
ATOM 9 C3' U B1944 18.841 10.804 90.921 1.00 38.07 C
ATOM 10 O3' U B1944 20.213 10.949 90.952 1.00 37.97 O
ATOM 11 C2' U B1944 18.310 10.244 89.597 1.00 37.86 C
ATOM 12 O2' U B1944 19.303 9.505 88.929 1.00 37.57 O
ATOM 13 C1' U B1944 17.189 9.290 90.045 1.00 37.91 C
ATOM 14 N1 U B1944 15.906 9.644 89.444 1.00 38.01 N
ATOM 15 C2 U B1944 15.323 10.853 89.690 1.00 38.27 C
ATOM 16 O2 U B1944 15.773 11.614 90.534 1.00 38.45 O
ATOM 17 N3 U B1944 14.169 11.075 88.957 1.00 38.34 N
ATOM 18 C4 U B1944 13.592 10.226 88.033 1.00 38.17 C
ATOM 19 O4 U B1944 12.521 10.484 87.437 1.00 38.26 O
ATOM 20 C5 U B1944 14.297 9.002 87.878 1.00 37.90 C
ATOM 21 C6 U B1944 15.396 8.750 88.560 1.00 37.83 C
ATOM 22 P A B1945 20.931 12.174 90.237 1.00 33.60 P
ATOM 23 OP1 A B1945 20.404 12.236 88.920 1.00 33.47 O
ATOM 24 OP2 A B1945 22.423 11.969 90.392 1.00 33.47 O
ATOM 25 O5' A B1945 20.472 13.436 91.089 1.00 33.96 O
TER
ATOM 2 P U A1948 17.960 15.372 84.426 1.00 38.98 P
ATOM 3 OP1 U A1948 17.121 16.467 84.698 1.00 39.29 O
ATOM 4 OP2 U A1948 18.586 14.692 85.511 1.00 38.93 O
ATOM 5 O5' U A1948 17.156 14.324 83.537 1.00 38.80 O
ATOM 6 C5' U A1948 16.162 14.748 82.629 1.00 38.89 C
ATOM 7 C4' U A1948 14.993 13.841 82.670 1.00 38.89 C
ATOM 8 O4' U A1948 15.436 12.477 82.627 1.00 38.63 O
ATOM 9 C3' U A1948 14.170 13.932 83.924 1.00 39.13 C
ATOM 10 O3' U A1948 13.222 14.990 83.864 1.00 39.42 O
ATOM 11 C2' U A1948 13.543 12.538 84.066 1.00 39.01 C
ATOM 12 O2' U A1948 12.291 12.480 83.440 1.00 39.10 O
ATOM 13 C1' U A1948 14.519 11.648 83.300 1.00 38.68 C
ATOM 14 N1 U A1948 15.266 10.735 84.184 1.00 38.55 N
ATOM 15 C2 U A1948 15.237 9.403 83.842 1.00 38.34 C
ATOM 16 O2 U A1948 14.640 9.020 82.859 1.00 38.27 O
ATOM 17 N3 U A1948 15.977 8.591 84.654 1.00 38.24 N
ATOM 18 C4 U A1948 16.693 8.992 85.760 1.00 38.33 C
ATOM 19 O4 U A1948 17.304 8.168 86.432 1.00 38.24 O
ATOM 20 C5 U A1948 16.666 10.365 86.062 1.00 38.55 C
ATOM 21 C6 U A1948 15.964 11.166 85.277 1.00 38.65 C
ATOM 22 P A A1949 13.264 16.155 84.963 1.00 42.43 P
ATOM 23 OP1 A A1949 13.020 17.416 84.283 1.00 42.61 O
ATOM 24 OP2 A A1949 14.512 16.010 85.710 1.00 42.33 O
ATOM 25 O5' A A1949 12.067 15.769 85.916 1.00 42.63 O
TER
ATOM 1 O3' C B1943 16.187 11.643 95.282 1.00 42.54 O
ATOM 2 P U B1944 17.275 12.499 94.491 1.00 39.05 P
ATOM 3 OP1 U B1944 18.466 12.518 95.298 1.00 39.08 O
ATOM 4 OP2 U B1944 16.676 13.741 94.113 1.00 39.24 O
ATOM 5 O5' U B1944 17.538 11.646 93.215 1.00 38.68 O
ATOM 6 C5' U B1944 18.194 10.390 93.307 1.00 38.45 C
ATOM 7 C4' U B1944 18.381 9.811 91.958 1.00 38.14 C
ATOM 8 O4' U B1944 17.114 9.330 91.449 1.00 38.13 O
ATOM 9 C3' U B1944 18.841 10.804 90.921 1.00 38.07 C
ATOM 10 O3' U B1944 20.213 10.949 90.952 1.00 37.97 O
ATOM 11 C2' U B1944 18.310 10.244 89.597 1.00 37.86 C
ATOM 12 O2' U B1944 19.303 9.505 88.929 1.00 37.57 O
ATOM 13 C1' U B1944 17.189 9.290 90.045 1.00 37.91 C
ATOM 14 N1 U B1944 15.906 9.644 89.444 1.00 38.01 N
ATOM 15 C2 U B1944 15.323 10.853 89.690 1.00 38.27 C
ATOM 16 O2 U B1944 15.773 11.614 90.534 1.00 38.45 O
ATOM 17 N3 U B1944 14.169 11.075 88.957 1.00 38.34 N
ATOM 18 C4 U B1944 13.592 10.226 88.033 1.00 38.17 C
ATOM 19 O4 U B1944 12.521 10.484 87.437 1.00 38.26 O
ATOM 20 C5 U B1944 14.297 9.002 87.878 1.00 37.90 C
ATOM 21 C6 U B1944 15.396 8.750 88.560 1.00 37.83 C
ATOM 22 P A B1945 20.931 12.174 90.237 1.00 33.60 P
ATOM 23 OP1 A B1945 20.404 12.236 88.920 1.00 33.47 O
ATOM 24 OP2 A B1945 22.423 11.969 90.392 1.00 33.47 O
ATOM 25 O5' A B1945 20.472 13.436 91.089 1.00 33.96 O
TER
Atoms:
C4: (16.693,8.992,85.760)
N3: (15.977,8.591,84.654)
OP1: (17.121,16.467,84.698)
OP2: (18.586,14.692,85.511)
C2: (15.237,9.403,83.842)
C1': (14.519,11.648,83.300)
C3': (14.170,13.932,83.924)
O5': (17.156,14.324,83.537)
O4': (15.436,12.477,82.627)
C5': (16.162,14.748,82.629)
P: (17.960,15.372,84.426)
C4': (14.993,13.841,82.670)
C2': (13.543,12.538,84.066)
O2': (12.291,12.480,83.440)
N1: (15.266,10.735,84.184)
O4: (17.304,8.168,86.432)
O2: (14.640,9.020,82.859)
C6: (15.964,11.166,85.277)
C5: (16.666,10.365,86.062)
O3': (13.222,14.990,83.864)
N3: (15.977,8.591,84.654)
OP1: (17.121,16.467,84.698)
OP2: (18.586,14.692,85.511)
C2: (15.237,9.403,83.842)
C1': (14.519,11.648,83.300)
C3': (14.170,13.932,83.924)
O5': (17.156,14.324,83.537)
O4': (15.436,12.477,82.627)
C5': (16.162,14.748,82.629)
P: (17.960,15.372,84.426)
C4': (14.993,13.841,82.670)
C2': (13.543,12.538,84.066)
O2': (12.291,12.480,83.440)
N1: (15.266,10.735,84.184)
O4: (17.304,8.168,86.432)
O2: (14.640,9.020,82.859)
C6: (15.964,11.166,85.277)
C5: (16.666,10.365,86.062)
O3': (13.222,14.990,83.864)
C4: (13.592,10.226,88.033)
N3: (14.169,11.075,88.957)
OP1: (18.466,12.518,95.298)
OP2: (16.676,13.741,94.113)
C2: (15.323,10.853,89.690)
C1': (17.189,9.290,90.045)
C3': (18.841,10.804,90.921)
O5': (17.538,11.646,93.215)
O4': (17.114,9.330,91.449)
C5': (18.194,10.390,93.307)
P: (17.275,12.499,94.491)
C4': (18.381,9.811,91.958)
C2': (18.310,10.244,89.597)
O2': (19.303,9.505,88.929)
N1: (15.906,9.644,89.444)
O4: (12.521,10.484,87.437)
O2: (15.773,11.614,90.534)
C6: (15.396,8.750,88.560)
C5: (14.297,9.002,87.878)
O3': (20.213,10.949,90.952)
N3: (14.169,11.075,88.957)
OP1: (18.466,12.518,95.298)
OP2: (16.676,13.741,94.113)
C2: (15.323,10.853,89.690)
C1': (17.189,9.290,90.045)
C3': (18.841,10.804,90.921)
O5': (17.538,11.646,93.215)
O4': (17.114,9.330,91.449)
C5': (18.194,10.390,93.307)
P: (17.275,12.499,94.491)
C4': (18.381,9.811,91.958)
C2': (18.310,10.244,89.597)
O2': (19.303,9.505,88.929)
N1: (15.906,9.644,89.444)
O4: (12.521,10.484,87.437)
O2: (15.773,11.614,90.534)
C6: (15.396,8.750,88.560)
C5: (14.297,9.002,87.878)
O3': (20.213,10.949,90.952)
Image (generated by PyMOL):