Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12468:12504
Extra
PDB:
ATOM 1 O3' A A2467 24.914 -66.877 63.794 1.00 52.83 O
ATOM 2 P U A2468 26.495 -66.823 64.114 1.00 49.61 P
ATOM 3 OP1 U A2468 26.698 -65.682 65.061 1.00 49.16 O
ATOM 4 OP2 U A2468 27.220 -66.816 62.804 1.00 49.63 O
ATOM 5 O5' U A2468 26.763 -68.211 64.869 1.00 50.07 O
ATOM 6 C5' U A2468 25.929 -68.633 65.944 1.00 50.24 C
ATOM 7 C4' U A2468 26.340 -69.982 66.464 1.00 50.71 C
ATOM 8 O4' U A2468 26.303 -70.955 65.407 1.00 51.11 O
ATOM 9 C3' U A2468 27.748 -70.093 66.954 1.00 50.67 C
ATOM 10 O3' U A2468 27.922 -69.509 68.214 1.00 50.42 O
ATOM 11 C2' U A2468 27.953 -71.590 66.949 1.00 51.24 C
ATOM 12 O2' U A2468 27.241 -72.175 68.024 1.00 51.48 O
ATOM 13 C1' U A2468 27.239 -71.969 65.671 1.00 51.45 C
ATOM 14 N1 U A2468 28.144 -72.077 64.529 1.00 51.49 N
ATOM 15 C2 U A2468 28.999 -73.145 64.494 1.00 51.88 C
ATOM 16 O2 U A2468 29.073 -73.946 65.374 1.00 52.17 O
ATOM 17 N3 U A2468 29.812 -73.255 63.407 1.00 51.94 N
ATOM 18 C4 U A2468 29.834 -72.381 62.352 1.00 51.64 C
ATOM 19 O4 U A2468 30.623 -72.594 61.446 1.00 51.74 O
ATOM 20 C5 U A2468 28.910 -71.306 62.436 1.00 51.25 C
ATOM 21 C6 U A2468 28.104 -71.192 63.492 1.00 51.19 C
ATOM 22 P U A2469 29.244 -68.674 68.524 1.00 57.94 P
ATOM 23 OP1 U A2469 29.070 -68.091 69.870 1.00 57.72 O
ATOM 24 OP2 U A2469 29.469 -67.770 67.376 1.00 57.62 O
ATOM 25 O5' U A2469 30.347 -69.803 68.573 1.00 58.33 O
TER
ATOM 1 O3' G B2503 27.325 -69.520 54.340 1.00 52.94 O
ATOM 2 P U B2504 28.656 -68.737 54.841 1.00 56.45 P
ATOM 3 OP1 U B2504 28.854 -67.614 53.898 1.00 56.12 O
ATOM 4 OP2 U B2504 29.734 -69.721 55.011 1.00 56.76 O
ATOM 5 O5' U B2504 28.235 -68.161 56.239 1.00 56.13 O
ATOM 6 C5' U B2504 28.275 -68.943 57.402 1.00 56.32 C
ATOM 7 C4' U B2504 28.525 -68.065 58.581 1.00 55.89 C
ATOM 8 O4' U B2504 29.369 -68.789 59.507 1.00 56.05 O
ATOM 9 C3' U B2504 29.311 -66.828 58.237 1.00 55.42 C
ATOM 10 O3' U B2504 29.246 -65.926 59.343 1.00 55.02 O
ATOM 11 C2' U B2504 30.707 -67.427 58.152 1.00 55.59 C
ATOM 12 O2' U B2504 31.755 -66.493 58.189 1.00 55.21 O
ATOM 13 C1' U B2504 30.696 -68.346 59.381 1.00 55.84 C
ATOM 14 N1 U B2504 31.532 -69.534 59.259 1.00 56.26 N
ATOM 15 C2 U B2504 32.055 -69.998 60.456 1.00 56.35 C
ATOM 16 O2 U B2504 31.877 -69.492 61.553 1.00 56.10 O
ATOM 17 N3 U B2504 32.830 -71.101 60.381 1.00 56.76 N
ATOM 18 C4 U B2504 33.096 -71.778 59.250 1.00 57.09 C
ATOM 19 O4 U B2504 33.809 -72.746 59.421 1.00 57.45 O
ATOM 20 C5 U B2504 32.523 -71.258 58.038 1.00 56.99 C
ATOM 21 C6 U B2504 31.765 -70.164 58.076 1.00 56.58 C
ATOM 22 P G B2505 28.871 -64.379 59.147 1.00 53.21 P
ATOM 23 OP1 G B2505 29.957 -63.775 58.397 1.00 53.00 O
ATOM 24 OP2 G B2505 28.541 -63.835 60.502 1.00 52.95 O
ATOM 25 O5' G B2505 27.579 -64.429 58.236 1.00 53.36 O
TER
ATOM 2 P U A2468 26.495 -66.823 64.114 1.00 49.61 P
ATOM 3 OP1 U A2468 26.698 -65.682 65.061 1.00 49.16 O
ATOM 4 OP2 U A2468 27.220 -66.816 62.804 1.00 49.63 O
ATOM 5 O5' U A2468 26.763 -68.211 64.869 1.00 50.07 O
ATOM 6 C5' U A2468 25.929 -68.633 65.944 1.00 50.24 C
ATOM 7 C4' U A2468 26.340 -69.982 66.464 1.00 50.71 C
ATOM 8 O4' U A2468 26.303 -70.955 65.407 1.00 51.11 O
ATOM 9 C3' U A2468 27.748 -70.093 66.954 1.00 50.67 C
ATOM 10 O3' U A2468 27.922 -69.509 68.214 1.00 50.42 O
ATOM 11 C2' U A2468 27.953 -71.590 66.949 1.00 51.24 C
ATOM 12 O2' U A2468 27.241 -72.175 68.024 1.00 51.48 O
ATOM 13 C1' U A2468 27.239 -71.969 65.671 1.00 51.45 C
ATOM 14 N1 U A2468 28.144 -72.077 64.529 1.00 51.49 N
ATOM 15 C2 U A2468 28.999 -73.145 64.494 1.00 51.88 C
ATOM 16 O2 U A2468 29.073 -73.946 65.374 1.00 52.17 O
ATOM 17 N3 U A2468 29.812 -73.255 63.407 1.00 51.94 N
ATOM 18 C4 U A2468 29.834 -72.381 62.352 1.00 51.64 C
ATOM 19 O4 U A2468 30.623 -72.594 61.446 1.00 51.74 O
ATOM 20 C5 U A2468 28.910 -71.306 62.436 1.00 51.25 C
ATOM 21 C6 U A2468 28.104 -71.192 63.492 1.00 51.19 C
ATOM 22 P U A2469 29.244 -68.674 68.524 1.00 57.94 P
ATOM 23 OP1 U A2469 29.070 -68.091 69.870 1.00 57.72 O
ATOM 24 OP2 U A2469 29.469 -67.770 67.376 1.00 57.62 O
ATOM 25 O5' U A2469 30.347 -69.803 68.573 1.00 58.33 O
TER
ATOM 1 O3' G B2503 27.325 -69.520 54.340 1.00 52.94 O
ATOM 2 P U B2504 28.656 -68.737 54.841 1.00 56.45 P
ATOM 3 OP1 U B2504 28.854 -67.614 53.898 1.00 56.12 O
ATOM 4 OP2 U B2504 29.734 -69.721 55.011 1.00 56.76 O
ATOM 5 O5' U B2504 28.235 -68.161 56.239 1.00 56.13 O
ATOM 6 C5' U B2504 28.275 -68.943 57.402 1.00 56.32 C
ATOM 7 C4' U B2504 28.525 -68.065 58.581 1.00 55.89 C
ATOM 8 O4' U B2504 29.369 -68.789 59.507 1.00 56.05 O
ATOM 9 C3' U B2504 29.311 -66.828 58.237 1.00 55.42 C
ATOM 10 O3' U B2504 29.246 -65.926 59.343 1.00 55.02 O
ATOM 11 C2' U B2504 30.707 -67.427 58.152 1.00 55.59 C
ATOM 12 O2' U B2504 31.755 -66.493 58.189 1.00 55.21 O
ATOM 13 C1' U B2504 30.696 -68.346 59.381 1.00 55.84 C
ATOM 14 N1 U B2504 31.532 -69.534 59.259 1.00 56.26 N
ATOM 15 C2 U B2504 32.055 -69.998 60.456 1.00 56.35 C
ATOM 16 O2 U B2504 31.877 -69.492 61.553 1.00 56.10 O
ATOM 17 N3 U B2504 32.830 -71.101 60.381 1.00 56.76 N
ATOM 18 C4 U B2504 33.096 -71.778 59.250 1.00 57.09 C
ATOM 19 O4 U B2504 33.809 -72.746 59.421 1.00 57.45 O
ATOM 20 C5 U B2504 32.523 -71.258 58.038 1.00 56.99 C
ATOM 21 C6 U B2504 31.765 -70.164 58.076 1.00 56.58 C
ATOM 22 P G B2505 28.871 -64.379 59.147 1.00 53.21 P
ATOM 23 OP1 G B2505 29.957 -63.775 58.397 1.00 53.00 O
ATOM 24 OP2 G B2505 28.541 -63.835 60.502 1.00 52.95 O
ATOM 25 O5' G B2505 27.579 -64.429 58.236 1.00 53.36 O
TER
Atoms:
C4: (29.834,-72.381,62.352)
N3: (29.812,-73.255,63.407)
OP1: (26.698,-65.682,65.061)
OP2: (27.220,-66.816,62.804)
C2: (28.999,-73.145,64.494)
C1': (27.239,-71.969,65.671)
C3': (27.748,-70.093,66.954)
O5': (26.763,-68.211,64.869)
O4': (26.303,-70.955,65.407)
C5': (25.929,-68.633,65.944)
P: (26.495,-66.823,64.114)
C4': (26.340,-69.982,66.464)
C2': (27.953,-71.590,66.949)
O2': (27.241,-72.175,68.024)
N1: (28.144,-72.077,64.529)
O4: (30.623,-72.594,61.446)
O2: (29.073,-73.946,65.374)
C6: (28.104,-71.192,63.492)
C5: (28.910,-71.306,62.436)
O3': (27.922,-69.509,68.214)
N3: (29.812,-73.255,63.407)
OP1: (26.698,-65.682,65.061)
OP2: (27.220,-66.816,62.804)
C2: (28.999,-73.145,64.494)
C1': (27.239,-71.969,65.671)
C3': (27.748,-70.093,66.954)
O5': (26.763,-68.211,64.869)
O4': (26.303,-70.955,65.407)
C5': (25.929,-68.633,65.944)
P: (26.495,-66.823,64.114)
C4': (26.340,-69.982,66.464)
C2': (27.953,-71.590,66.949)
O2': (27.241,-72.175,68.024)
N1: (28.144,-72.077,64.529)
O4: (30.623,-72.594,61.446)
O2: (29.073,-73.946,65.374)
C6: (28.104,-71.192,63.492)
C5: (28.910,-71.306,62.436)
O3': (27.922,-69.509,68.214)
C4: (33.096,-71.778,59.250)
N3: (32.830,-71.101,60.381)
OP1: (28.854,-67.614,53.898)
OP2: (29.734,-69.721,55.011)
C2: (32.055,-69.998,60.456)
C1': (30.696,-68.346,59.381)
C3': (29.311,-66.828,58.237)
O5': (28.235,-68.161,56.239)
O4': (29.369,-68.789,59.507)
C5': (28.275,-68.943,57.402)
P: (28.656,-68.737,54.841)
C4': (28.525,-68.065,58.581)
C2': (30.707,-67.427,58.152)
O2': (31.755,-66.493,58.189)
N1: (31.532,-69.534,59.259)
O4: (33.809,-72.746,59.421)
O2: (31.877,-69.492,61.553)
C6: (31.765,-70.164,58.076)
C5: (32.523,-71.258,58.038)
O3': (29.246,-65.926,59.343)
N3: (32.830,-71.101,60.381)
OP1: (28.854,-67.614,53.898)
OP2: (29.734,-69.721,55.011)
C2: (32.055,-69.998,60.456)
C1': (30.696,-68.346,59.381)
C3': (29.311,-66.828,58.237)
O5': (28.235,-68.161,56.239)
O4': (29.369,-68.789,59.507)
C5': (28.275,-68.943,57.402)
P: (28.656,-68.737,54.841)
C4': (28.525,-68.065,58.581)
C2': (30.707,-67.427,58.152)
O2': (31.755,-66.493,58.189)
N1: (31.532,-69.534,59.259)
O4: (33.809,-72.746,59.421)
O2: (31.877,-69.492,61.553)
C6: (31.765,-70.164,58.076)
C5: (32.523,-71.258,58.038)
O3': (29.246,-65.926,59.343)
Image (generated by PyMOL):