Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1887:1886
Extra
PDB:
ATOM 1 O3' U A 886 63.090 -7.951 69.758 1.00 30.44 O
ATOM 2 P U A 887 63.760 -8.290 68.344 1.00 29.94 P
ATOM 3 OP1 U A 887 62.697 -8.084 67.297 1.00 29.81 O
ATOM 4 OP2 U A 887 64.406 -9.622 68.478 1.00 30.02 O
ATOM 5 O5' U A 887 64.878 -7.220 68.177 1.00 30.04 O
ATOM 6 C5' U A 887 64.675 -5.880 68.514 1.00 30.04 C
ATOM 7 C4' U A 887 65.941 -5.293 69.038 1.00 30.21 C
ATOM 8 O4' U A 887 65.892 -5.337 70.484 1.00 30.27 O
ATOM 9 C3' U A 887 67.187 -6.069 68.625 1.00 30.32 C
ATOM 10 O3' U A 887 68.262 -5.176 68.404 1.00 30.44 O
ATOM 11 C2' U A 887 67.462 -6.923 69.848 1.00 30.40 C
ATOM 12 O2' U A 887 68.795 -7.288 70.005 1.00 30.56 O
ATOM 13 C1' U A 887 67.011 -6.015 70.968 1.00 30.41 C
ATOM 14 N1 U A 887 66.635 -6.723 72.193 1.00 30.43 N
ATOM 15 C2 U A 887 67.534 -6.775 73.267 1.00 30.60 C
ATOM 16 O2 U A 887 68.609 -6.238 73.242 1.00 30.74 O
ATOM 17 N3 U A 887 67.133 -7.455 74.380 1.00 30.63 N
ATOM 18 C4 U A 887 65.887 -8.047 74.493 1.00 30.50 C
ATOM 19 O4 U A 887 65.558 -8.643 75.519 1.00 30.54 O
ATOM 20 C5 U A 887 65.042 -7.933 73.361 1.00 30.32 C
ATOM 21 C6 U A 887 65.426 -7.282 72.276 1.00 30.30 C
ATOM 22 P C A 888 68.818 -4.936 66.911 1.00 29.48 P
ATOM 23 OP1 C A 888 69.937 -4.021 67.023 1.00 29.63 O
ATOM 24 OP2 C A 888 67.703 -4.552 66.062 1.00 29.33 O
ATOM 25 O5' C A 888 69.324 -6.377 66.465 1.00 29.51 O
TER
ATOM 1 O3' G B 885 57.964 -4.597 69.087 1.00 32.77 O
ATOM 2 P U B 886 59.030 -5.390 68.181 1.00 30.05 P
ATOM 3 OP1 U B 886 60.051 -4.482 67.870 1.00 30.14 O
ATOM 4 OP2 U B 886 58.297 -6.030 67.060 1.00 29.96 O
ATOM 5 O5' U B 886 59.602 -6.461 69.164 1.00 30.12 O
ATOM 6 C5' U B 886 60.536 -6.063 70.145 1.00 30.24 C
ATOM 7 C4' U B 886 61.075 -7.234 70.882 1.00 30.31 C
ATOM 8 O4' U B 886 59.967 -7.931 71.524 1.00 30.24 O
ATOM 9 C3' U B 886 61.727 -8.253 69.999 1.00 30.32 C
ATOM 10 O3' U B 886 63.090 -7.951 69.758 1.00 30.44 O
ATOM 11 C2' U B 886 61.459 -9.573 70.712 1.00 30.34 C
ATOM 12 O2' U B 886 62.382 -9.799 71.728 1.00 30.48 O
ATOM 13 C1' U B 886 60.105 -9.312 71.367 1.00 30.25 C
ATOM 14 N1 U B 886 59.002 -9.794 70.531 1.00 30.13 N
ATOM 15 C2 U B 886 58.794 -11.108 70.630 1.00 30.13 C
ATOM 16 O2 U B 886 59.401 -11.824 71.365 1.00 30.23 O
ATOM 17 N3 U B 886 57.851 -11.594 69.865 1.00 30.04 N
ATOM 18 C4 U B 886 57.107 -10.874 69.045 1.00 29.94 C
ATOM 19 O4 U B 886 56.318 -11.557 68.463 1.00 29.89 O
ATOM 20 C5 U B 886 57.345 -9.494 68.943 1.00 29.94 C
ATOM 21 C6 U B 886 58.287 -9.001 69.687 1.00 30.03 C
ATOM 22 P U B 887 63.760 -8.290 68.344 1.00 29.94 P
ATOM 23 OP1 U B 887 62.697 -8.084 67.297 1.00 29.81 O
ATOM 24 OP2 U B 887 64.406 -9.622 68.478 1.00 30.02 O
ATOM 25 O5' U B 887 64.878 -7.220 68.177 1.00 30.04 O
TER
ATOM 2 P U A 887 63.760 -8.290 68.344 1.00 29.94 P
ATOM 3 OP1 U A 887 62.697 -8.084 67.297 1.00 29.81 O
ATOM 4 OP2 U A 887 64.406 -9.622 68.478 1.00 30.02 O
ATOM 5 O5' U A 887 64.878 -7.220 68.177 1.00 30.04 O
ATOM 6 C5' U A 887 64.675 -5.880 68.514 1.00 30.04 C
ATOM 7 C4' U A 887 65.941 -5.293 69.038 1.00 30.21 C
ATOM 8 O4' U A 887 65.892 -5.337 70.484 1.00 30.27 O
ATOM 9 C3' U A 887 67.187 -6.069 68.625 1.00 30.32 C
ATOM 10 O3' U A 887 68.262 -5.176 68.404 1.00 30.44 O
ATOM 11 C2' U A 887 67.462 -6.923 69.848 1.00 30.40 C
ATOM 12 O2' U A 887 68.795 -7.288 70.005 1.00 30.56 O
ATOM 13 C1' U A 887 67.011 -6.015 70.968 1.00 30.41 C
ATOM 14 N1 U A 887 66.635 -6.723 72.193 1.00 30.43 N
ATOM 15 C2 U A 887 67.534 -6.775 73.267 1.00 30.60 C
ATOM 16 O2 U A 887 68.609 -6.238 73.242 1.00 30.74 O
ATOM 17 N3 U A 887 67.133 -7.455 74.380 1.00 30.63 N
ATOM 18 C4 U A 887 65.887 -8.047 74.493 1.00 30.50 C
ATOM 19 O4 U A 887 65.558 -8.643 75.519 1.00 30.54 O
ATOM 20 C5 U A 887 65.042 -7.933 73.361 1.00 30.32 C
ATOM 21 C6 U A 887 65.426 -7.282 72.276 1.00 30.30 C
ATOM 22 P C A 888 68.818 -4.936 66.911 1.00 29.48 P
ATOM 23 OP1 C A 888 69.937 -4.021 67.023 1.00 29.63 O
ATOM 24 OP2 C A 888 67.703 -4.552 66.062 1.00 29.33 O
ATOM 25 O5' C A 888 69.324 -6.377 66.465 1.00 29.51 O
TER
ATOM 1 O3' G B 885 57.964 -4.597 69.087 1.00 32.77 O
ATOM 2 P U B 886 59.030 -5.390 68.181 1.00 30.05 P
ATOM 3 OP1 U B 886 60.051 -4.482 67.870 1.00 30.14 O
ATOM 4 OP2 U B 886 58.297 -6.030 67.060 1.00 29.96 O
ATOM 5 O5' U B 886 59.602 -6.461 69.164 1.00 30.12 O
ATOM 6 C5' U B 886 60.536 -6.063 70.145 1.00 30.24 C
ATOM 7 C4' U B 886 61.075 -7.234 70.882 1.00 30.31 C
ATOM 8 O4' U B 886 59.967 -7.931 71.524 1.00 30.24 O
ATOM 9 C3' U B 886 61.727 -8.253 69.999 1.00 30.32 C
ATOM 10 O3' U B 886 63.090 -7.951 69.758 1.00 30.44 O
ATOM 11 C2' U B 886 61.459 -9.573 70.712 1.00 30.34 C
ATOM 12 O2' U B 886 62.382 -9.799 71.728 1.00 30.48 O
ATOM 13 C1' U B 886 60.105 -9.312 71.367 1.00 30.25 C
ATOM 14 N1 U B 886 59.002 -9.794 70.531 1.00 30.13 N
ATOM 15 C2 U B 886 58.794 -11.108 70.630 1.00 30.13 C
ATOM 16 O2 U B 886 59.401 -11.824 71.365 1.00 30.23 O
ATOM 17 N3 U B 886 57.851 -11.594 69.865 1.00 30.04 N
ATOM 18 C4 U B 886 57.107 -10.874 69.045 1.00 29.94 C
ATOM 19 O4 U B 886 56.318 -11.557 68.463 1.00 29.89 O
ATOM 20 C5 U B 886 57.345 -9.494 68.943 1.00 29.94 C
ATOM 21 C6 U B 886 58.287 -9.001 69.687 1.00 30.03 C
ATOM 22 P U B 887 63.760 -8.290 68.344 1.00 29.94 P
ATOM 23 OP1 U B 887 62.697 -8.084 67.297 1.00 29.81 O
ATOM 24 OP2 U B 887 64.406 -9.622 68.478 1.00 30.02 O
ATOM 25 O5' U B 887 64.878 -7.220 68.177 1.00 30.04 O
TER
Atoms:
C4: (65.887,-8.047,74.493)
N3: (67.133,-7.455,74.380)
OP1: (62.697,-8.084,67.297)
OP2: (64.406,-9.622,68.478)
C2: (67.534,-6.775,73.267)
C1': (67.011,-6.015,70.968)
C3': (67.187,-6.069,68.625)
O5': (64.878,-7.220,68.177)
O4': (65.892,-5.337,70.484)
C5': (64.675,-5.880,68.514)
P: (63.760,-8.290,68.344)
C4': (65.941,-5.293,69.038)
C2': (67.462,-6.923,69.848)
O2': (68.795,-7.288,70.005)
N1: (66.635,-6.723,72.193)
O4: (65.558,-8.643,75.519)
O2: (68.609,-6.238,73.242)
C6: (65.426,-7.282,72.276)
C5: (65.042,-7.933,73.361)
O3': (68.262,-5.176,68.404)
N3: (67.133,-7.455,74.380)
OP1: (62.697,-8.084,67.297)
OP2: (64.406,-9.622,68.478)
C2: (67.534,-6.775,73.267)
C1': (67.011,-6.015,70.968)
C3': (67.187,-6.069,68.625)
O5': (64.878,-7.220,68.177)
O4': (65.892,-5.337,70.484)
C5': (64.675,-5.880,68.514)
P: (63.760,-8.290,68.344)
C4': (65.941,-5.293,69.038)
C2': (67.462,-6.923,69.848)
O2': (68.795,-7.288,70.005)
N1: (66.635,-6.723,72.193)
O4: (65.558,-8.643,75.519)
O2: (68.609,-6.238,73.242)
C6: (65.426,-7.282,72.276)
C5: (65.042,-7.933,73.361)
O3': (68.262,-5.176,68.404)
C4: (57.107,-10.874,69.045)
N3: (57.851,-11.594,69.865)
OP1: (60.051,-4.482,67.870)
OP2: (58.297,-6.030,67.060)
C2: (58.794,-11.108,70.630)
C1': (60.105,-9.312,71.367)
C3': (61.727,-8.253,69.999)
O5': (59.602,-6.461,69.164)
O4': (59.967,-7.931,71.524)
C5': (60.536,-6.063,70.145)
P: (59.030,-5.390,68.181)
C4': (61.075,-7.234,70.882)
C2': (61.459,-9.573,70.712)
O2': (62.382,-9.799,71.728)
N1: (59.002,-9.794,70.531)
O4: (56.318,-11.557,68.463)
O2: (59.401,-11.824,71.365)
C6: (58.287,-9.001,69.687)
C5: (57.345,-9.494,68.943)
O3': (63.090,-7.951,69.758)
N3: (57.851,-11.594,69.865)
OP1: (60.051,-4.482,67.870)
OP2: (58.297,-6.030,67.060)
C2: (58.794,-11.108,70.630)
C1': (60.105,-9.312,71.367)
C3': (61.727,-8.253,69.999)
O5': (59.602,-6.461,69.164)
O4': (59.967,-7.931,71.524)
C5': (60.536,-6.063,70.145)
P: (59.030,-5.390,68.181)
C4': (61.075,-7.234,70.882)
C2': (61.459,-9.573,70.712)
O2': (62.382,-9.799,71.728)
N1: (59.002,-9.794,70.531)
O4: (56.318,-11.557,68.463)
O2: (59.401,-11.824,71.365)
C6: (58.287,-9.001,69.687)
C5: (57.345,-9.494,68.943)
O3': (63.090,-7.951,69.758)
Image (generated by PyMOL):