Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:51389:5340
Extra
PDB:
ATOM 1 O3' U A1388 124.989 3.189 209.708 1.00 39.07 O
ATOM 2 P U A1389 125.242 4.722 209.409 1.00 37.79 P
ATOM 3 OP1 U A1389 126.347 4.800 208.422 1.00 37.91 O
ATOM 4 OP2 U A1389 125.382 5.394 210.725 1.00 37.44 O
ATOM 5 O5' U A1389 123.884 5.156 208.731 1.00 38.10 O
ATOM 6 C5' U A1389 123.576 4.816 207.401 1.00 38.47 C
ATOM 7 C4' U A1389 122.198 5.303 207.027 1.00 38.72 C
ATOM 8 O4' U A1389 121.192 4.655 207.834 1.00 38.67 O
ATOM 9 C3' U A1389 121.921 6.773 207.255 1.00 38.65 C
ATOM 10 O3' U A1389 122.499 7.548 206.258 1.00 38.81 O
ATOM 11 C2' U A1389 120.418 6.795 207.235 1.00 38.85 C
ATOM 12 O2' U A1389 119.968 6.560 205.922 1.00 39.25 O
ATOM 13 C1' U A1389 120.120 5.547 208.039 1.00 38.73 C
ATOM 14 N1 U A1389 120.022 5.832 209.462 1.00 38.39 N
ATOM 15 C2 U A1389 118.800 6.257 209.930 1.00 38.43 C
ATOM 16 O2 U A1389 117.881 6.415 209.177 1.00 38.74 O
ATOM 17 N3 U A1389 118.705 6.500 211.280 1.00 38.13 N
ATOM 18 C4 U A1389 119.780 6.347 212.158 1.00 37.78 C
ATOM 19 O4 U A1389 119.665 6.609 213.355 1.00 37.53 O
ATOM 20 C5 U A1389 121.004 5.898 211.578 1.00 37.76 C
ATOM 21 C6 U A1389 121.085 5.639 210.281 1.00 38.06 C
ATOM 22 P G A1390 122.664 9.114 206.404 1.00 38.76 P
ATOM 23 OP1 G A1390 123.002 9.623 205.028 1.00 39.07 O
ATOM 24 OP2 G A1390 123.593 9.340 207.518 1.00 38.37 O
ATOM 25 O5' G A1390 121.226 9.606 206.777 1.00 38.84 O
TER
ATOM 1 O3' A B 339 112.434 3.747 200.477 1.00 38.47 O
ATOM 2 P U B 340 113.076 3.956 201.944 1.00 37.96 P
ATOM 3 OP1 U B 340 111.994 4.014 202.946 1.00 37.86 O
ATOM 4 OP2 U B 340 113.984 5.102 201.840 1.00 37.79 O
ATOM 5 O5' U B 340 113.870 2.607 202.150 1.00 37.83 O
ATOM 6 C5' U B 340 115.200 2.465 201.709 1.00 37.75 C
ATOM 7 C4' U B 340 116.080 2.031 202.826 1.00 37.33 C
ATOM 8 O4' U B 340 116.259 3.146 203.720 1.00 37.00 O
ATOM 9 C3' U B 340 115.539 0.888 203.673 1.00 37.24 C
ATOM 10 O3' U B 340 116.625 0.092 204.105 1.00 37.01 O
ATOM 11 C2' U B 340 114.972 1.620 204.884 1.00 36.96 C
ATOM 12 O2' U B 340 114.915 0.836 206.061 1.00 36.71 O
ATOM 13 C1' U B 340 115.970 2.749 205.018 1.00 36.72 C
ATOM 14 N1 U B 340 115.491 3.892 205.729 1.00 36.56 N
ATOM 15 C2 U B 340 116.314 4.367 206.784 1.00 36.14 C
ATOM 16 O2 U B 340 117.354 3.868 207.236 1.00 35.90 O
ATOM 17 N3 U B 340 115.828 5.455 207.448 1.00 36.01 N
ATOM 18 C4 U B 340 114.662 6.091 207.157 1.00 36.25 C
ATOM 19 O4 U B 340 114.413 7.034 207.897 1.00 36.08 O
ATOM 20 C5 U B 340 113.923 5.576 206.022 1.00 36.67 C
ATOM 21 C6 U B 340 114.352 4.507 205.346 1.00 36.81 C
ATOM 22 P A B 341 117.035 -1.228 203.329 1.00 38.58 P
ATOM 23 OP1 A B 341 117.943 -2.023 204.218 1.00 38.26 O
ATOM 24 OP2 A B 341 117.528 -0.836 201.981 1.00 38.85 O
ATOM 25 O5' A B 341 115.661 -1.950 203.226 1.00 38.86 O
TER
ATOM 2 P U A1389 125.242 4.722 209.409 1.00 37.79 P
ATOM 3 OP1 U A1389 126.347 4.800 208.422 1.00 37.91 O
ATOM 4 OP2 U A1389 125.382 5.394 210.725 1.00 37.44 O
ATOM 5 O5' U A1389 123.884 5.156 208.731 1.00 38.10 O
ATOM 6 C5' U A1389 123.576 4.816 207.401 1.00 38.47 C
ATOM 7 C4' U A1389 122.198 5.303 207.027 1.00 38.72 C
ATOM 8 O4' U A1389 121.192 4.655 207.834 1.00 38.67 O
ATOM 9 C3' U A1389 121.921 6.773 207.255 1.00 38.65 C
ATOM 10 O3' U A1389 122.499 7.548 206.258 1.00 38.81 O
ATOM 11 C2' U A1389 120.418 6.795 207.235 1.00 38.85 C
ATOM 12 O2' U A1389 119.968 6.560 205.922 1.00 39.25 O
ATOM 13 C1' U A1389 120.120 5.547 208.039 1.00 38.73 C
ATOM 14 N1 U A1389 120.022 5.832 209.462 1.00 38.39 N
ATOM 15 C2 U A1389 118.800 6.257 209.930 1.00 38.43 C
ATOM 16 O2 U A1389 117.881 6.415 209.177 1.00 38.74 O
ATOM 17 N3 U A1389 118.705 6.500 211.280 1.00 38.13 N
ATOM 18 C4 U A1389 119.780 6.347 212.158 1.00 37.78 C
ATOM 19 O4 U A1389 119.665 6.609 213.355 1.00 37.53 O
ATOM 20 C5 U A1389 121.004 5.898 211.578 1.00 37.76 C
ATOM 21 C6 U A1389 121.085 5.639 210.281 1.00 38.06 C
ATOM 22 P G A1390 122.664 9.114 206.404 1.00 38.76 P
ATOM 23 OP1 G A1390 123.002 9.623 205.028 1.00 39.07 O
ATOM 24 OP2 G A1390 123.593 9.340 207.518 1.00 38.37 O
ATOM 25 O5' G A1390 121.226 9.606 206.777 1.00 38.84 O
TER
ATOM 1 O3' A B 339 112.434 3.747 200.477 1.00 38.47 O
ATOM 2 P U B 340 113.076 3.956 201.944 1.00 37.96 P
ATOM 3 OP1 U B 340 111.994 4.014 202.946 1.00 37.86 O
ATOM 4 OP2 U B 340 113.984 5.102 201.840 1.00 37.79 O
ATOM 5 O5' U B 340 113.870 2.607 202.150 1.00 37.83 O
ATOM 6 C5' U B 340 115.200 2.465 201.709 1.00 37.75 C
ATOM 7 C4' U B 340 116.080 2.031 202.826 1.00 37.33 C
ATOM 8 O4' U B 340 116.259 3.146 203.720 1.00 37.00 O
ATOM 9 C3' U B 340 115.539 0.888 203.673 1.00 37.24 C
ATOM 10 O3' U B 340 116.625 0.092 204.105 1.00 37.01 O
ATOM 11 C2' U B 340 114.972 1.620 204.884 1.00 36.96 C
ATOM 12 O2' U B 340 114.915 0.836 206.061 1.00 36.71 O
ATOM 13 C1' U B 340 115.970 2.749 205.018 1.00 36.72 C
ATOM 14 N1 U B 340 115.491 3.892 205.729 1.00 36.56 N
ATOM 15 C2 U B 340 116.314 4.367 206.784 1.00 36.14 C
ATOM 16 O2 U B 340 117.354 3.868 207.236 1.00 35.90 O
ATOM 17 N3 U B 340 115.828 5.455 207.448 1.00 36.01 N
ATOM 18 C4 U B 340 114.662 6.091 207.157 1.00 36.25 C
ATOM 19 O4 U B 340 114.413 7.034 207.897 1.00 36.08 O
ATOM 20 C5 U B 340 113.923 5.576 206.022 1.00 36.67 C
ATOM 21 C6 U B 340 114.352 4.507 205.346 1.00 36.81 C
ATOM 22 P A B 341 117.035 -1.228 203.329 1.00 38.58 P
ATOM 23 OP1 A B 341 117.943 -2.023 204.218 1.00 38.26 O
ATOM 24 OP2 A B 341 117.528 -0.836 201.981 1.00 38.85 O
ATOM 25 O5' A B 341 115.661 -1.950 203.226 1.00 38.86 O
TER
Atoms:
C4: (119.780,6.347,212.158)
N3: (118.705,6.500,211.280)
OP1: (126.347,4.800,208.422)
OP2: (125.382,5.394,210.725)
C2: (118.800,6.257,209.930)
C1': (120.120,5.547,208.039)
C3': (121.921,6.773,207.255)
O5': (123.884,5.156,208.731)
O4': (121.192,4.655,207.834)
C5': (123.576,4.816,207.401)
P: (125.242,4.722,209.409)
C4': (122.198,5.303,207.027)
C2': (120.418,6.795,207.235)
O2': (119.968,6.560,205.922)
N1: (120.022,5.832,209.462)
O4: (119.665,6.609,213.355)
O2: (117.881,6.415,209.177)
C6: (121.085,5.639,210.281)
C5: (121.004,5.898,211.578)
O3': (122.499,7.548,206.258)
N3: (118.705,6.500,211.280)
OP1: (126.347,4.800,208.422)
OP2: (125.382,5.394,210.725)
C2: (118.800,6.257,209.930)
C1': (120.120,5.547,208.039)
C3': (121.921,6.773,207.255)
O5': (123.884,5.156,208.731)
O4': (121.192,4.655,207.834)
C5': (123.576,4.816,207.401)
P: (125.242,4.722,209.409)
C4': (122.198,5.303,207.027)
C2': (120.418,6.795,207.235)
O2': (119.968,6.560,205.922)
N1: (120.022,5.832,209.462)
O4: (119.665,6.609,213.355)
O2: (117.881,6.415,209.177)
C6: (121.085,5.639,210.281)
C5: (121.004,5.898,211.578)
O3': (122.499,7.548,206.258)
C4: (114.662,6.091,207.157)
N3: (115.828,5.455,207.448)
OP1: (111.994,4.014,202.946)
OP2: (113.984,5.102,201.840)
C2: (116.314,4.367,206.784)
C1': (115.970,2.749,205.018)
C3': (115.539,0.888,203.673)
O5': (113.870,2.607,202.150)
O4': (116.259,3.146,203.720)
C5': (115.200,2.465,201.709)
P: (113.076,3.956,201.944)
C4': (116.080,2.031,202.826)
C2': (114.972,1.620,204.884)
O2': (114.915,0.836,206.061)
N1: (115.491,3.892,205.729)
O4: (114.413,7.034,207.897)
O2: (117.354,3.868,207.236)
C6: (114.352,4.507,205.346)
C5: (113.923,5.576,206.022)
O3': (116.625,0.092,204.105)
N3: (115.828,5.455,207.448)
OP1: (111.994,4.014,202.946)
OP2: (113.984,5.102,201.840)
C2: (116.314,4.367,206.784)
C1': (115.970,2.749,205.018)
C3': (115.539,0.888,203.673)
O5': (113.870,2.607,202.150)
O4': (116.259,3.146,203.720)
C5': (115.200,2.465,201.709)
P: (113.076,3.956,201.944)
C4': (116.080,2.031,202.826)
C2': (114.972,1.620,204.884)
O2': (114.915,0.836,206.061)
N1: (115.491,3.892,205.729)
O4: (114.413,7.034,207.897)
O2: (117.354,3.868,207.236)
C6: (114.352,4.507,205.346)
C5: (113.923,5.576,206.022)
O3': (116.625,0.092,204.105)
Image (generated by PyMOL):