Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01:02032
Extra
PDB:
ATOM 1 P A A 1 20.861 148.924 101.399 1.00 82.87 P
ATOM 2 OP1 A A 1 20.485 149.072 99.971 1.00 84.59 O
ATOM 3 OP2 A A 1 21.354 147.618 101.886 1.00 83.60 O
ATOM 4 O5' A A 1 21.944 150.038 101.746 1.00 78.99 O
ATOM 5 C5' A A 1 23.308 149.902 101.338 1.00 72.08 C
ATOM 6 C4' A A 1 24.211 150.663 102.279 1.00 68.12 C
ATOM 7 O4' A A 1 23.898 150.305 103.647 1.00 66.07 O
ATOM 8 C3' A A 1 25.681 150.336 102.107 1.00 66.74 C
ATOM 9 O3' A A 1 26.249 151.144 101.091 1.00 64.46 O
ATOM 10 C2' A A 1 26.247 150.558 103.505 1.00 65.56 C
ATOM 11 O2' A A 1 26.488 151.912 103.819 1.00 64.93 O
ATOM 12 C1' A A 1 25.090 150.060 104.372 1.00 64.25 C
ATOM 13 N9 A A 1 25.117 148.632 104.697 1.00 61.94 N
ATOM 14 C8 A A 1 24.065 147.753 104.616 1.00 61.33 C
ATOM 15 N7 A A 1 24.359 146.535 104.992 1.00 60.01 N
ATOM 16 C5 A A 1 25.697 146.611 105.337 1.00 60.88 C
ATOM 17 C6 A A 1 26.592 145.656 105.817 1.00 60.11 C
ATOM 18 N6 A A 1 26.257 144.388 106.045 1.00 62.53 N
ATOM 19 N1 A A 1 27.860 146.048 106.064 1.00 60.55 N
ATOM 20 C2 A A 1 28.190 147.322 105.844 1.00 60.54 C
ATOM 21 N3 A A 1 27.432 148.322 105.397 1.00 62.35 N
ATOM 22 C4 A A 1 26.180 147.895 105.158 1.00 61.98 C
ATOM 23 P U A 2 26.371 150.563 99.598 1.00 66.73 P
ATOM 24 OP1 U A 2 26.734 151.708 98.720 1.00 67.68 O
ATOM 25 OP2 U A 2 25.167 149.750 99.285 1.00 67.44 O
ATOM 26 O5' U A 2 27.610 149.564 99.669 1.00 66.65 O
TER
ATOM 1 O3' A B2031 31.417 141.818 106.561 1.00 47.41 O
ATOM 2 P C B2032 32.951 142.044 106.139 1.00 46.99 P
ATOM 3 OP1 C B2032 33.178 141.279 104.883 1.00 46.79 O
ATOM 4 OP2 C B2032 33.807 141.785 107.332 1.00 47.04 O
ATOM 5 O5' C B2032 33.045 143.605 105.834 1.00 46.12 O
ATOM 6 C5' C B2032 32.346 144.196 104.730 1.00 43.69 C
ATOM 7 C4' C B2032 32.549 145.692 104.733 1.00 44.17 C
ATOM 8 O4' C B2032 31.973 146.259 105.942 1.00 43.69 O
ATOM 9 C3' C B2032 33.993 146.165 104.775 1.00 42.72 C
ATOM 10 O3' C B2032 34.608 146.161 103.507 1.00 44.31 O
ATOM 11 C2' C B2032 33.848 147.575 105.315 1.00 43.12 C
ATOM 12 O2' C B2032 33.403 148.492 104.337 1.00 42.69 O
ATOM 13 C1' C B2032 32.759 147.366 106.365 1.00 42.60 C
ATOM 14 N1 C B2032 33.348 147.060 107.681 1.00 43.09 N
ATOM 15 C2 C B2032 33.791 148.125 108.481 1.00 42.99 C
ATOM 16 O2 C B2032 33.671 149.289 108.059 1.00 43.77 O
ATOM 17 N3 C B2032 34.335 147.860 109.685 1.00 40.17 N
ATOM 18 C4 C B2032 34.446 146.600 110.103 1.00 39.68 C
ATOM 19 N4 C B2032 34.980 146.396 111.295 1.00 40.17 N
ATOM 20 C5 C B2032 34.010 145.499 109.315 1.00 40.21 C
ATOM 21 C6 C B2032 33.472 145.769 108.123 1.00 42.09 C
ATOM 22 P C B2033 36.208 146.087 103.406 1.00 47.16 P
ATOM 23 OP1 C B2033 36.526 146.075 101.954 1.00 46.20 O
ATOM 24 OP2 C B2033 36.710 144.994 104.283 1.00 47.06 O
ATOM 25 O5' C B2033 36.711 147.461 104.031 1.00 44.47 O
TER
ATOM 2 OP1 A A 1 20.485 149.072 99.971 1.00 84.59 O
ATOM 3 OP2 A A 1 21.354 147.618 101.886 1.00 83.60 O
ATOM 4 O5' A A 1 21.944 150.038 101.746 1.00 78.99 O
ATOM 5 C5' A A 1 23.308 149.902 101.338 1.00 72.08 C
ATOM 6 C4' A A 1 24.211 150.663 102.279 1.00 68.12 C
ATOM 7 O4' A A 1 23.898 150.305 103.647 1.00 66.07 O
ATOM 8 C3' A A 1 25.681 150.336 102.107 1.00 66.74 C
ATOM 9 O3' A A 1 26.249 151.144 101.091 1.00 64.46 O
ATOM 10 C2' A A 1 26.247 150.558 103.505 1.00 65.56 C
ATOM 11 O2' A A 1 26.488 151.912 103.819 1.00 64.93 O
ATOM 12 C1' A A 1 25.090 150.060 104.372 1.00 64.25 C
ATOM 13 N9 A A 1 25.117 148.632 104.697 1.00 61.94 N
ATOM 14 C8 A A 1 24.065 147.753 104.616 1.00 61.33 C
ATOM 15 N7 A A 1 24.359 146.535 104.992 1.00 60.01 N
ATOM 16 C5 A A 1 25.697 146.611 105.337 1.00 60.88 C
ATOM 17 C6 A A 1 26.592 145.656 105.817 1.00 60.11 C
ATOM 18 N6 A A 1 26.257 144.388 106.045 1.00 62.53 N
ATOM 19 N1 A A 1 27.860 146.048 106.064 1.00 60.55 N
ATOM 20 C2 A A 1 28.190 147.322 105.844 1.00 60.54 C
ATOM 21 N3 A A 1 27.432 148.322 105.397 1.00 62.35 N
ATOM 22 C4 A A 1 26.180 147.895 105.158 1.00 61.98 C
ATOM 23 P U A 2 26.371 150.563 99.598 1.00 66.73 P
ATOM 24 OP1 U A 2 26.734 151.708 98.720 1.00 67.68 O
ATOM 25 OP2 U A 2 25.167 149.750 99.285 1.00 67.44 O
ATOM 26 O5' U A 2 27.610 149.564 99.669 1.00 66.65 O
TER
ATOM 1 O3' A B2031 31.417 141.818 106.561 1.00 47.41 O
ATOM 2 P C B2032 32.951 142.044 106.139 1.00 46.99 P
ATOM 3 OP1 C B2032 33.178 141.279 104.883 1.00 46.79 O
ATOM 4 OP2 C B2032 33.807 141.785 107.332 1.00 47.04 O
ATOM 5 O5' C B2032 33.045 143.605 105.834 1.00 46.12 O
ATOM 6 C5' C B2032 32.346 144.196 104.730 1.00 43.69 C
ATOM 7 C4' C B2032 32.549 145.692 104.733 1.00 44.17 C
ATOM 8 O4' C B2032 31.973 146.259 105.942 1.00 43.69 O
ATOM 9 C3' C B2032 33.993 146.165 104.775 1.00 42.72 C
ATOM 10 O3' C B2032 34.608 146.161 103.507 1.00 44.31 O
ATOM 11 C2' C B2032 33.848 147.575 105.315 1.00 43.12 C
ATOM 12 O2' C B2032 33.403 148.492 104.337 1.00 42.69 O
ATOM 13 C1' C B2032 32.759 147.366 106.365 1.00 42.60 C
ATOM 14 N1 C B2032 33.348 147.060 107.681 1.00 43.09 N
ATOM 15 C2 C B2032 33.791 148.125 108.481 1.00 42.99 C
ATOM 16 O2 C B2032 33.671 149.289 108.059 1.00 43.77 O
ATOM 17 N3 C B2032 34.335 147.860 109.685 1.00 40.17 N
ATOM 18 C4 C B2032 34.446 146.600 110.103 1.00 39.68 C
ATOM 19 N4 C B2032 34.980 146.396 111.295 1.00 40.17 N
ATOM 20 C5 C B2032 34.010 145.499 109.315 1.00 40.21 C
ATOM 21 C6 C B2032 33.472 145.769 108.123 1.00 42.09 C
ATOM 22 P C B2033 36.208 146.087 103.406 1.00 47.16 P
ATOM 23 OP1 C B2033 36.526 146.075 101.954 1.00 46.20 O
ATOM 24 OP2 C B2033 36.710 144.994 104.283 1.00 47.06 O
ATOM 25 O5' C B2033 36.711 147.461 104.031 1.00 44.47 O
TER
Atoms:
OP1: (20.485,149.072,99.971)
OP2: (21.354,147.618,101.886)
C3': (25.681,150.336,102.107)
C1': (25.090,150.060,104.372)
C5': (23.308,149.902,101.338)
O4': (23.898,150.305,103.647)
C8: (24.065,147.753,104.616)
O2': (26.488,151.912,103.819)
C6: (26.592,145.656,105.817)
C5: (25.697,146.611,105.337)
C4: (26.180,147.895,105.158)
P: (20.861,148.924,101.399)
C4': (24.211,150.663,102.279)
C2': (26.247,150.558,103.505)
C2: (28.190,147.322,105.844)
N1: (27.860,146.048,106.064)
N3: (27.432,148.322,105.397)
N6: (26.257,144.388,106.045)
N7: (24.359,146.535,104.992)
N9: (25.117,148.632,104.697)
O5': (21.944,150.038,101.746)
O3': (26.249,151.144,101.091)
OP2: (21.354,147.618,101.886)
C3': (25.681,150.336,102.107)
C1': (25.090,150.060,104.372)
C5': (23.308,149.902,101.338)
O4': (23.898,150.305,103.647)
C8: (24.065,147.753,104.616)
O2': (26.488,151.912,103.819)
C6: (26.592,145.656,105.817)
C5: (25.697,146.611,105.337)
C4: (26.180,147.895,105.158)
P: (20.861,148.924,101.399)
C4': (24.211,150.663,102.279)
C2': (26.247,150.558,103.505)
C2: (28.190,147.322,105.844)
N1: (27.860,146.048,106.064)
N3: (27.432,148.322,105.397)
N6: (26.257,144.388,106.045)
N7: (24.359,146.535,104.992)
N9: (25.117,148.632,104.697)
O5': (21.944,150.038,101.746)
O3': (26.249,151.144,101.091)
C2: (33.791,148.125,108.481)
OP1: (33.178,141.279,104.883)
OP2: (33.807,141.785,107.332)
C4: (34.446,146.600,110.103)
O5': (33.045,143.605,105.834)
C3': (33.993,146.165,104.775)
C1': (32.759,147.366,106.365)
O4': (31.973,146.259,105.942)
C5': (32.346,144.196,104.730)
P: (32.951,142.044,106.139)
O2: (33.671,149.289,108.059)
C4': (32.549,145.692,104.733)
C2': (33.848,147.575,105.315)
O2': (33.403,148.492,104.337)
N1: (33.348,147.060,107.681)
N3: (34.335,147.860,109.685)
N4: (34.980,146.396,111.295)
C6: (33.472,145.769,108.123)
C5: (34.010,145.499,109.315)
O3': (34.608,146.161,103.507)
OP1: (33.178,141.279,104.883)
OP2: (33.807,141.785,107.332)
C4: (34.446,146.600,110.103)
O5': (33.045,143.605,105.834)
C3': (33.993,146.165,104.775)
C1': (32.759,147.366,106.365)
O4': (31.973,146.259,105.942)
C5': (32.346,144.196,104.730)
P: (32.951,142.044,106.139)
O2: (33.671,149.289,108.059)
C4': (32.549,145.692,104.733)
C2': (33.848,147.575,105.315)
O2': (33.403,148.492,104.337)
N1: (33.348,147.060,107.681)
N3: (34.335,147.860,109.685)
N4: (34.980,146.396,111.295)
C6: (33.472,145.769,108.123)
C5: (34.010,145.499,109.315)
O3': (34.608,146.161,103.507)
Image (generated by PyMOL):