Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02324:01003
Extra
PDB:
ATOM 1 O3' G A2323 57.618 109.176 94.912 1.00 39.19 O
ATOM 2 P A A2324 56.883 107.803 94.529 1.00 37.61 P
ATOM 3 OP1 A A2324 55.427 108.054 94.587 1.00 38.61 O
ATOM 4 OP2 A A2324 57.476 106.738 95.367 1.00 37.69 O
ATOM 5 O5' A A2324 57.328 107.513 93.029 1.00 36.58 O
ATOM 6 C5' A A2324 58.697 107.193 92.719 1.00 36.19 C
ATOM 7 C4' A A2324 58.831 105.724 92.417 1.00 35.77 C
ATOM 8 O4' A A2324 58.015 105.419 91.253 1.00 36.25 O
ATOM 9 C3' A A2324 60.237 105.218 92.101 1.00 37.86 C
ATOM 10 O3' A A2324 60.410 103.898 92.605 1.00 39.74 O
ATOM 11 C2' A A2324 60.230 105.154 90.574 1.00 39.17 C
ATOM 12 O2' A A2324 61.125 104.191 90.047 1.00 41.29 O
ATOM 13 C1' A A2324 58.787 104.745 90.289 1.00 36.44 C
ATOM 14 N9 A A2324 58.304 105.141 88.967 1.00 36.91 N
ATOM 15 C8 A A2324 58.230 106.410 88.456 1.00 37.31 C
ATOM 16 N7 A A2324 57.745 106.466 87.241 1.00 38.24 N
ATOM 17 C5 A A2324 57.476 105.143 86.927 1.00 38.80 C
ATOM 18 C6 A A2324 56.925 104.532 85.777 1.00 39.31 C
ATOM 19 N6 A A2324 56.520 105.214 84.696 1.00 38.23 N
ATOM 20 N1 A A2324 56.796 103.186 85.781 1.00 36.46 N
ATOM 21 C2 A A2324 57.176 102.514 86.870 1.00 37.05 C
ATOM 22 N3 A A2324 57.692 102.974 88.016 1.00 38.79 N
ATOM 23 C4 A A2324 57.821 104.312 87.979 1.00 38.76 C
ATOM 24 P U A2325 60.908 103.667 94.118 1.00 42.57 P
ATOM 25 OP1 U A2325 60.960 102.199 94.352 1.00 44.79 O
ATOM 26 OP2 U A2325 60.112 104.530 95.031 1.00 41.99 O
ATOM 27 O5' U A2325 62.416 104.157 94.135 1.00 42.25 O
TER
ATOM 1 O3' C B1002 54.267 94.764 85.219 1.00 40.87 O
ATOM 2 P C B1003 55.351 95.940 85.332 1.00 41.76 P
ATOM 3 OP1 C B1003 56.052 96.083 84.042 1.00 44.77 O
ATOM 4 OP2 C B1003 56.128 95.613 86.556 1.00 43.73 O
ATOM 5 O5' C B1003 54.530 97.288 85.603 1.00 41.92 O
ATOM 6 C5' C B1003 53.711 97.460 86.795 1.00 40.85 C
ATOM 7 C4' C B1003 54.549 97.914 87.990 1.00 40.22 C
ATOM 8 O4' C B1003 54.974 99.306 87.840 1.00 40.00 O
ATOM 9 C3' C B1003 53.816 97.860 89.335 1.00 38.88 C
ATOM 10 O3' C B1003 54.723 97.451 90.349 1.00 38.87 O
ATOM 11 C2' C B1003 53.430 99.315 89.569 1.00 38.23 C
ATOM 12 O2' C B1003 53.247 99.645 90.927 1.00 38.79 O
ATOM 13 C1' C B1003 54.664 100.012 89.025 1.00 38.63 C
ATOM 14 N1 C B1003 54.511 101.460 88.754 1.00 40.46 N
ATOM 15 C2 C B1003 54.941 102.370 89.746 1.00 42.96 C
ATOM 16 O2 C B1003 55.426 101.927 90.809 1.00 49.21 O
ATOM 17 N3 C B1003 54.821 103.701 89.528 1.00 39.04 N
ATOM 18 C4 C B1003 54.303 104.140 88.387 1.00 37.95 C
ATOM 19 N4 C B1003 54.212 105.460 88.222 1.00 37.09 N
ATOM 20 C5 C B1003 53.854 103.246 87.365 1.00 38.15 C
ATOM 21 C6 C B1003 53.973 101.926 87.588 1.00 38.34 C
ATOM 22 P G B1004 55.015 95.888 90.574 1.00 40.64 P
ATOM 23 OP1 G B1004 56.379 95.748 91.127 1.00 43.78 O
ATOM 24 OP2 G B1004 54.663 95.163 89.333 1.00 41.66 O
ATOM 25 O5' G B1004 53.984 95.449 91.702 1.00 41.35 O
TER
ATOM 2 P A A2324 56.883 107.803 94.529 1.00 37.61 P
ATOM 3 OP1 A A2324 55.427 108.054 94.587 1.00 38.61 O
ATOM 4 OP2 A A2324 57.476 106.738 95.367 1.00 37.69 O
ATOM 5 O5' A A2324 57.328 107.513 93.029 1.00 36.58 O
ATOM 6 C5' A A2324 58.697 107.193 92.719 1.00 36.19 C
ATOM 7 C4' A A2324 58.831 105.724 92.417 1.00 35.77 C
ATOM 8 O4' A A2324 58.015 105.419 91.253 1.00 36.25 O
ATOM 9 C3' A A2324 60.237 105.218 92.101 1.00 37.86 C
ATOM 10 O3' A A2324 60.410 103.898 92.605 1.00 39.74 O
ATOM 11 C2' A A2324 60.230 105.154 90.574 1.00 39.17 C
ATOM 12 O2' A A2324 61.125 104.191 90.047 1.00 41.29 O
ATOM 13 C1' A A2324 58.787 104.745 90.289 1.00 36.44 C
ATOM 14 N9 A A2324 58.304 105.141 88.967 1.00 36.91 N
ATOM 15 C8 A A2324 58.230 106.410 88.456 1.00 37.31 C
ATOM 16 N7 A A2324 57.745 106.466 87.241 1.00 38.24 N
ATOM 17 C5 A A2324 57.476 105.143 86.927 1.00 38.80 C
ATOM 18 C6 A A2324 56.925 104.532 85.777 1.00 39.31 C
ATOM 19 N6 A A2324 56.520 105.214 84.696 1.00 38.23 N
ATOM 20 N1 A A2324 56.796 103.186 85.781 1.00 36.46 N
ATOM 21 C2 A A2324 57.176 102.514 86.870 1.00 37.05 C
ATOM 22 N3 A A2324 57.692 102.974 88.016 1.00 38.79 N
ATOM 23 C4 A A2324 57.821 104.312 87.979 1.00 38.76 C
ATOM 24 P U A2325 60.908 103.667 94.118 1.00 42.57 P
ATOM 25 OP1 U A2325 60.960 102.199 94.352 1.00 44.79 O
ATOM 26 OP2 U A2325 60.112 104.530 95.031 1.00 41.99 O
ATOM 27 O5' U A2325 62.416 104.157 94.135 1.00 42.25 O
TER
ATOM 1 O3' C B1002 54.267 94.764 85.219 1.00 40.87 O
ATOM 2 P C B1003 55.351 95.940 85.332 1.00 41.76 P
ATOM 3 OP1 C B1003 56.052 96.083 84.042 1.00 44.77 O
ATOM 4 OP2 C B1003 56.128 95.613 86.556 1.00 43.73 O
ATOM 5 O5' C B1003 54.530 97.288 85.603 1.00 41.92 O
ATOM 6 C5' C B1003 53.711 97.460 86.795 1.00 40.85 C
ATOM 7 C4' C B1003 54.549 97.914 87.990 1.00 40.22 C
ATOM 8 O4' C B1003 54.974 99.306 87.840 1.00 40.00 O
ATOM 9 C3' C B1003 53.816 97.860 89.335 1.00 38.88 C
ATOM 10 O3' C B1003 54.723 97.451 90.349 1.00 38.87 O
ATOM 11 C2' C B1003 53.430 99.315 89.569 1.00 38.23 C
ATOM 12 O2' C B1003 53.247 99.645 90.927 1.00 38.79 O
ATOM 13 C1' C B1003 54.664 100.012 89.025 1.00 38.63 C
ATOM 14 N1 C B1003 54.511 101.460 88.754 1.00 40.46 N
ATOM 15 C2 C B1003 54.941 102.370 89.746 1.00 42.96 C
ATOM 16 O2 C B1003 55.426 101.927 90.809 1.00 49.21 O
ATOM 17 N3 C B1003 54.821 103.701 89.528 1.00 39.04 N
ATOM 18 C4 C B1003 54.303 104.140 88.387 1.00 37.95 C
ATOM 19 N4 C B1003 54.212 105.460 88.222 1.00 37.09 N
ATOM 20 C5 C B1003 53.854 103.246 87.365 1.00 38.15 C
ATOM 21 C6 C B1003 53.973 101.926 87.588 1.00 38.34 C
ATOM 22 P G B1004 55.015 95.888 90.574 1.00 40.64 P
ATOM 23 OP1 G B1004 56.379 95.748 91.127 1.00 43.78 O
ATOM 24 OP2 G B1004 54.663 95.163 89.333 1.00 41.66 O
ATOM 25 O5' G B1004 53.984 95.449 91.702 1.00 41.35 O
TER
Atoms:
OP1: (55.427,108.054,94.587)
OP2: (57.476,106.738,95.367)
C3': (60.237,105.218,92.101)
C1': (58.787,104.745,90.289)
C5': (58.697,107.193,92.719)
O4': (58.015,105.419,91.253)
C8: (58.230,106.410,88.456)
O2': (61.125,104.191,90.047)
C6: (56.925,104.532,85.777)
C5: (57.476,105.143,86.927)
C4: (57.821,104.312,87.979)
P: (56.883,107.803,94.529)
C4': (58.831,105.724,92.417)
C2': (60.230,105.154,90.574)
C2: (57.176,102.514,86.870)
N1: (56.796,103.186,85.781)
N3: (57.692,102.974,88.016)
N6: (56.520,105.214,84.696)
N7: (57.745,106.466,87.241)
N9: (58.304,105.141,88.967)
O5': (57.328,107.513,93.029)
O3': (60.410,103.898,92.605)
OP2: (57.476,106.738,95.367)
C3': (60.237,105.218,92.101)
C1': (58.787,104.745,90.289)
C5': (58.697,107.193,92.719)
O4': (58.015,105.419,91.253)
C8: (58.230,106.410,88.456)
O2': (61.125,104.191,90.047)
C6: (56.925,104.532,85.777)
C5: (57.476,105.143,86.927)
C4: (57.821,104.312,87.979)
P: (56.883,107.803,94.529)
C4': (58.831,105.724,92.417)
C2': (60.230,105.154,90.574)
C2: (57.176,102.514,86.870)
N1: (56.796,103.186,85.781)
N3: (57.692,102.974,88.016)
N6: (56.520,105.214,84.696)
N7: (57.745,106.466,87.241)
N9: (58.304,105.141,88.967)
O5': (57.328,107.513,93.029)
O3': (60.410,103.898,92.605)
C2: (54.941,102.370,89.746)
OP1: (56.052,96.083,84.042)
OP2: (56.128,95.613,86.556)
C4: (54.303,104.140,88.387)
O5': (54.530,97.288,85.603)
C3': (53.816,97.860,89.335)
C1': (54.664,100.012,89.025)
O4': (54.974,99.306,87.840)
C5': (53.711,97.460,86.795)
P: (55.351,95.940,85.332)
O2: (55.426,101.927,90.809)
C4': (54.549,97.914,87.990)
C2': (53.430,99.315,89.569)
O2': (53.247,99.645,90.927)
N1: (54.511,101.460,88.754)
N3: (54.821,103.701,89.528)
N4: (54.212,105.460,88.222)
C6: (53.973,101.926,87.588)
C5: (53.854,103.246,87.365)
O3': (54.723,97.451,90.349)
OP1: (56.052,96.083,84.042)
OP2: (56.128,95.613,86.556)
C4: (54.303,104.140,88.387)
O5': (54.530,97.288,85.603)
C3': (53.816,97.860,89.335)
C1': (54.664,100.012,89.025)
O4': (54.974,99.306,87.840)
C5': (53.711,97.460,86.795)
P: (55.351,95.940,85.332)
O2: (55.426,101.927,90.809)
C4': (54.549,97.914,87.990)
C2': (53.430,99.315,89.569)
O2': (53.247,99.645,90.927)
N1: (54.511,101.460,88.754)
N3: (54.821,103.701,89.528)
N4: (54.212,105.460,88.222)
C6: (53.973,101.926,87.588)
C5: (53.854,103.246,87.365)
O3': (54.723,97.451,90.349)
Image (generated by PyMOL):