ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A1557:A762

Extra

PDB:
ATOM 1 O3' C A1556 43.638 -61.078 -8.265 1.00 24.91 O
ATOM 2 P A A1557 43.069 -61.015 -6.781 1.00 34.86 P
ATOM 3 OP1 A A1557 43.673 -62.137 -6.047 1.00 34.69 O
ATOM 4 OP2 A A1557 41.598 -60.890 -6.857 1.00 34.47 O
ATOM 5 O5' A A1557 43.671 -59.661 -6.207 1.00 46.70 O
ATOM 6 C5' A A1557 43.359 -58.414 -6.816 1.00 41.09 C
ATOM 7 C4' A A1557 42.753 -57.477 -5.798 1.00 43.20 C
ATOM 8 O4' A A1557 42.850 -58.107 -4.501 1.00 49.05 O
ATOM 9 C3' A A1557 43.435 -56.116 -5.687 1.00 44.59 C
ATOM 10 O3' A A1557 42.480 -55.082 -5.365 1.00 43.80 O
ATOM 11 C2' A A1557 44.429 -56.330 -4.543 1.00 48.99 C
ATOM 12 O2' A A1557 44.642 -55.116 -3.844 1.00 54.48 O
ATOM 13 C1' A A1557 43.717 -57.369 -3.663 1.00 51.21 C
ATOM 14 N9 A A1557 44.570 -58.336 -2.942 1.00 51.56 N
ATOM 15 C8 A A1557 44.491 -59.716 -3.021 1.00 52.43 C
ATOM 16 N7 A A1557 45.338 -60.345 -2.241 1.00 55.27 N
ATOM 17 C5 A A1557 46.033 -59.321 -1.608 1.00 52.73 C
ATOM 18 C6 A A1557 47.079 -59.331 -0.657 1.00 51.77 C
ATOM 19 N6 A A1557 47.590 -60.446 -0.133 1.00 52.25 N
ATOM 20 N1 A A1557 47.580 -58.145 -0.253 1.00 54.07 N
ATOM 21 C2 A A1557 47.048 -57.022 -0.759 1.00 52.16 C
ATOM 22 N3 A A1557 46.049 -56.877 -1.643 1.00 52.15 N
ATOM 23 C4 A A1557 45.581 -58.078 -2.037 1.00 52.56 C
ATOM 24 P G A1558 42.098 -53.943 -6.459 1.00 45.23 P
ATOM 25 OP1 G A1558 41.795 -52.664 -5.755 1.00 40.82 O
ATOM 26 OP2 G A1558 41.099 -54.494 -7.422 1.00 48.79 O
ATOM 27 O5' G A1558 43.450 -53.728 -7.268 1.00 30.37 O
TER

ATOM 1 O3' C B 761 47.689 -51.606 -5.603 1.00 36.40 O
ATOM 2 P C B 762 47.293 -50.353 -4.681 1.00 42.50 P
ATOM 3 OP1 C B 762 45.957 -49.865 -5.113 1.00 39.14 O
ATOM 4 OP2 C B 762 48.446 -49.428 -4.688 1.00 40.02 O
ATOM 5 O5' C B 762 47.161 -50.962 -3.217 1.00 33.50 O
ATOM 6 C5' C B 762 47.533 -52.306 -3.004 1.00 36.68 C
ATOM 7 C4' C B 762 47.186 -52.769 -1.625 1.00 35.69 C
ATOM 8 O4' C B 762 48.266 -53.638 -1.195 1.00 38.61 O
ATOM 9 C3' C B 762 47.070 -51.684 -0.566 1.00 41.30 C
ATOM 10 O3' C B 762 45.689 -51.398 -0.404 1.00 46.57 O
ATOM 11 C2' C B 762 47.653 -52.346 0.676 1.00 42.23 C
ATOM 12 O2' C B 762 46.718 -53.179 1.322 1.00 36.82 O
ATOM 13 C1' C B 762 48.751 -53.221 0.069 1.00 39.89 C
ATOM 14 N1 C B 762 50.016 -52.479 -0.159 1.00 44.84 N
ATOM 15 C2 C B 762 50.958 -52.317 0.896 1.00 47.17 C
ATOM 16 O2 C B 762 50.703 -52.781 2.021 1.00 50.30 O
ATOM 17 N3 C B 762 52.109 -51.646 0.648 1.00 42.27 N
ATOM 18 C4 C B 762 52.330 -51.131 -0.565 1.00 48.13 C
ATOM 19 N4 C B 762 53.478 -50.476 -0.779 1.00 49.00 N
ATOM 20 C5 C B 762 51.390 -51.267 -1.627 1.00 44.62 C
ATOM 21 C6 C B 762 50.269 -51.942 -1.386 1.00 44.31 C
ATOM 22 P C B 763 45.218 -50.298 0.649 1.00 38.87 P
ATOM 23 OP1 C B 763 43.777 -50.535 0.890 1.00 46.40 O
ATOM 24 OP2 C B 763 45.688 -48.967 0.193 1.00 41.44 O
ATOM 25 O5' C B 763 46.004 -50.657 1.981 1.00 32.77 O
TER

Atoms:
OP1: (43.673,-62.137,-6.047)
OP2: (41.598,-60.890,-6.857)
C3': (43.435,-56.116,-5.687)
C1': (43.717,-57.369,-3.663)
C5': (43.359,-58.414,-6.816)
O4': (42.850,-58.107,-4.501)
C8: (44.491,-59.716,-3.021)
O2': (44.642,-55.116,-3.844)
C6: (47.079,-59.331,-0.657)
C5: (46.033,-59.321,-1.608)
C4: (45.581,-58.078,-2.037)
P: (43.069,-61.015,-6.781)
C4': (42.753,-57.477,-5.798)
C2': (44.429,-56.330,-4.543)
C2: (47.048,-57.022,-0.759)
N1: (47.580,-58.145,-0.253)
N3: (46.049,-56.877,-1.643)
N6: (47.590,-60.446,-0.133)
N7: (45.338,-60.345,-2.241)
N9: (44.570,-58.336,-2.942)
O5': (43.671,-59.661,-6.207)
O3': (42.480,-55.082,-5.365)
C2: (50.958,-52.317,0.896)
OP1: (45.957,-49.865,-5.113)
OP2: (48.446,-49.428,-4.688)
C4: (52.330,-51.131,-0.565)
O5': (47.161,-50.962,-3.217)
C3': (47.070,-51.684,-0.566)
C1': (48.751,-53.221,0.069)
O4': (48.266,-53.638,-1.195)
C5': (47.533,-52.306,-3.004)
P: (47.293,-50.353,-4.681)
O2: (50.703,-52.781,2.021)
C4': (47.186,-52.769,-1.625)
C2': (47.653,-52.346,0.676)
O2': (46.718,-53.179,1.322)
N1: (50.016,-52.479,-0.159)
N3: (52.109,-51.646,0.648)
N4: (53.478,-50.476,-0.779)
C6: (50.269,-51.942,-1.386)
C5: (51.390,-51.267,-1.627)
O3': (45.689,-51.398,-0.404)
Image (generated by PyMOL):
PyMOL image
show in jmol