Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A681:A2281
Extra
PDB:
ATOM 1 O3' A A 680 65.420 74.525 46.076 1.00 55.35 O
ATOM 2 P A A 681 64.414 74.095 44.915 1.00 55.30 P
ATOM 3 OP1 A A 681 63.846 75.321 44.272 1.00 54.10 O
ATOM 4 OP2 A A 681 63.505 73.137 45.590 1.00 54.46 O
ATOM 5 O5' A A 681 65.369 73.335 43.875 1.00 56.94 O
ATOM 6 C5' A A 681 66.416 74.064 43.162 1.00 59.14 C
ATOM 7 C4' A A 681 67.390 73.125 42.467 1.00 59.58 C
ATOM 8 O4' A A 681 68.031 72.286 43.454 1.00 60.04 O
ATOM 9 C3' A A 681 66.834 72.162 41.427 1.00 60.17 C
ATOM 10 O3' A A 681 66.695 72.803 40.150 1.00 61.41 O
ATOM 11 C2' A A 681 67.880 71.047 41.427 1.00 60.22 C
ATOM 12 O2' A A 681 69.049 71.298 40.669 1.00 61.03 O
ATOM 13 C1' A A 681 68.286 71.008 42.901 1.00 60.45 C
ATOM 14 N9 A A 681 67.541 70.017 43.674 1.00 61.57 N
ATOM 15 C8 A A 681 66.359 70.194 44.360 1.00 61.66 C
ATOM 16 N7 A A 681 65.916 69.106 44.945 1.00 62.06 N
ATOM 17 C5 A A 681 66.874 68.148 44.635 1.00 62.46 C
ATOM 18 C6 A A 681 66.989 66.786 44.966 1.00 62.46 C
ATOM 19 N6 A A 681 66.108 66.132 45.722 1.00 61.42 N
ATOM 20 N1 A A 681 68.057 66.112 44.493 1.00 63.41 N
ATOM 21 C2 A A 681 68.951 66.772 43.746 1.00 64.09 C
ATOM 22 N3 A A 681 68.965 68.052 43.374 1.00 63.38 N
ATOM 23 C4 A A 681 67.883 68.695 43.854 1.00 62.32 C
ATOM 24 P A A 682 65.634 72.247 39.062 1.00 62.73 P
ATOM 25 OP1 A A 682 65.728 73.196 37.902 1.00 62.64 O
ATOM 26 OP2 A A 682 64.310 72.015 39.688 1.00 62.47 O
ATOM 27 O5' A A 682 66.234 70.820 38.646 1.00 62.21 O
TER
ATOM 1 O3' C B2280 73.948 62.509 41.558 1.00 66.80 O
ATOM 2 P C B2281 74.146 63.559 40.368 1.00 67.68 P
ATOM 3 OP1 C B2281 73.418 63.012 39.186 1.00 67.41 O
ATOM 4 OP2 C B2281 75.601 63.852 40.281 1.00 66.13 O
ATOM 5 O5' C B2281 73.435 64.894 40.870 1.00 67.28 O
ATOM 6 C5' C B2281 72.008 64.977 40.975 1.00 65.74 C
ATOM 7 C4' C B2281 71.586 66.380 41.356 1.00 63.77 C
ATOM 8 O4' C B2281 72.121 66.722 42.666 1.00 63.53 O
ATOM 9 C3' C B2281 72.081 67.508 40.478 1.00 63.09 C
ATOM 10 O3' C B2281 71.320 67.632 39.283 1.00 62.20 O
ATOM 11 C2' C B2281 71.878 68.697 41.402 1.00 63.28 C
ATOM 12 O2' C B2281 70.494 68.994 41.513 1.00 61.75 O
ATOM 13 C1' C B2281 72.362 68.119 42.735 1.00 63.44 C
ATOM 14 N1 C B2281 73.813 68.339 42.978 1.00 63.98 N
ATOM 15 C2 C B2281 74.257 69.573 43.512 1.00 63.86 C
ATOM 16 O2 C B2281 73.431 70.452 43.793 1.00 64.33 O
ATOM 17 N3 C B2281 75.585 69.768 43.708 1.00 64.21 N
ATOM 18 C4 C B2281 76.458 68.807 43.400 1.00 64.73 C
ATOM 19 N4 C B2281 77.754 69.065 43.585 1.00 64.91 N
ATOM 20 C5 C B2281 76.040 67.546 42.879 1.00 65.49 C
ATOM 21 C6 C B2281 74.723 67.359 42.685 1.00 65.10 C
ATOM 22 P U B2282 72.025 68.212 37.954 1.00 61.20 P
ATOM 23 OP1 U B2282 70.989 68.225 36.881 1.00 59.53 O
ATOM 24 OP2 U B2282 73.281 67.440 37.761 1.00 61.21 O
ATOM 25 O5' U B2282 72.460 69.707 38.337 1.00 61.68 O
TER
ATOM 2 P A A 681 64.414 74.095 44.915 1.00 55.30 P
ATOM 3 OP1 A A 681 63.846 75.321 44.272 1.00 54.10 O
ATOM 4 OP2 A A 681 63.505 73.137 45.590 1.00 54.46 O
ATOM 5 O5' A A 681 65.369 73.335 43.875 1.00 56.94 O
ATOM 6 C5' A A 681 66.416 74.064 43.162 1.00 59.14 C
ATOM 7 C4' A A 681 67.390 73.125 42.467 1.00 59.58 C
ATOM 8 O4' A A 681 68.031 72.286 43.454 1.00 60.04 O
ATOM 9 C3' A A 681 66.834 72.162 41.427 1.00 60.17 C
ATOM 10 O3' A A 681 66.695 72.803 40.150 1.00 61.41 O
ATOM 11 C2' A A 681 67.880 71.047 41.427 1.00 60.22 C
ATOM 12 O2' A A 681 69.049 71.298 40.669 1.00 61.03 O
ATOM 13 C1' A A 681 68.286 71.008 42.901 1.00 60.45 C
ATOM 14 N9 A A 681 67.541 70.017 43.674 1.00 61.57 N
ATOM 15 C8 A A 681 66.359 70.194 44.360 1.00 61.66 C
ATOM 16 N7 A A 681 65.916 69.106 44.945 1.00 62.06 N
ATOM 17 C5 A A 681 66.874 68.148 44.635 1.00 62.46 C
ATOM 18 C6 A A 681 66.989 66.786 44.966 1.00 62.46 C
ATOM 19 N6 A A 681 66.108 66.132 45.722 1.00 61.42 N
ATOM 20 N1 A A 681 68.057 66.112 44.493 1.00 63.41 N
ATOM 21 C2 A A 681 68.951 66.772 43.746 1.00 64.09 C
ATOM 22 N3 A A 681 68.965 68.052 43.374 1.00 63.38 N
ATOM 23 C4 A A 681 67.883 68.695 43.854 1.00 62.32 C
ATOM 24 P A A 682 65.634 72.247 39.062 1.00 62.73 P
ATOM 25 OP1 A A 682 65.728 73.196 37.902 1.00 62.64 O
ATOM 26 OP2 A A 682 64.310 72.015 39.688 1.00 62.47 O
ATOM 27 O5' A A 682 66.234 70.820 38.646 1.00 62.21 O
TER
ATOM 1 O3' C B2280 73.948 62.509 41.558 1.00 66.80 O
ATOM 2 P C B2281 74.146 63.559 40.368 1.00 67.68 P
ATOM 3 OP1 C B2281 73.418 63.012 39.186 1.00 67.41 O
ATOM 4 OP2 C B2281 75.601 63.852 40.281 1.00 66.13 O
ATOM 5 O5' C B2281 73.435 64.894 40.870 1.00 67.28 O
ATOM 6 C5' C B2281 72.008 64.977 40.975 1.00 65.74 C
ATOM 7 C4' C B2281 71.586 66.380 41.356 1.00 63.77 C
ATOM 8 O4' C B2281 72.121 66.722 42.666 1.00 63.53 O
ATOM 9 C3' C B2281 72.081 67.508 40.478 1.00 63.09 C
ATOM 10 O3' C B2281 71.320 67.632 39.283 1.00 62.20 O
ATOM 11 C2' C B2281 71.878 68.697 41.402 1.00 63.28 C
ATOM 12 O2' C B2281 70.494 68.994 41.513 1.00 61.75 O
ATOM 13 C1' C B2281 72.362 68.119 42.735 1.00 63.44 C
ATOM 14 N1 C B2281 73.813 68.339 42.978 1.00 63.98 N
ATOM 15 C2 C B2281 74.257 69.573 43.512 1.00 63.86 C
ATOM 16 O2 C B2281 73.431 70.452 43.793 1.00 64.33 O
ATOM 17 N3 C B2281 75.585 69.768 43.708 1.00 64.21 N
ATOM 18 C4 C B2281 76.458 68.807 43.400 1.00 64.73 C
ATOM 19 N4 C B2281 77.754 69.065 43.585 1.00 64.91 N
ATOM 20 C5 C B2281 76.040 67.546 42.879 1.00 65.49 C
ATOM 21 C6 C B2281 74.723 67.359 42.685 1.00 65.10 C
ATOM 22 P U B2282 72.025 68.212 37.954 1.00 61.20 P
ATOM 23 OP1 U B2282 70.989 68.225 36.881 1.00 59.53 O
ATOM 24 OP2 U B2282 73.281 67.440 37.761 1.00 61.21 O
ATOM 25 O5' U B2282 72.460 69.707 38.337 1.00 61.68 O
TER
Atoms:
OP1: (63.846,75.321,44.272)
OP2: (63.505,73.137,45.590)
C3': (66.834,72.162,41.427)
C1': (68.286,71.008,42.901)
C5': (66.416,74.064,43.162)
O4': (68.031,72.286,43.454)
C8: (66.359,70.194,44.360)
O2': (69.049,71.298,40.669)
C6: (66.989,66.786,44.966)
C5: (66.874,68.148,44.635)
C4: (67.883,68.695,43.854)
P: (64.414,74.095,44.915)
C4': (67.390,73.125,42.467)
C2': (67.880,71.047,41.427)
C2: (68.951,66.772,43.746)
N1: (68.057,66.112,44.493)
N3: (68.965,68.052,43.374)
N6: (66.108,66.132,45.722)
N7: (65.916,69.106,44.945)
N9: (67.541,70.017,43.674)
O5': (65.369,73.335,43.875)
O3': (66.695,72.803,40.150)
OP2: (63.505,73.137,45.590)
C3': (66.834,72.162,41.427)
C1': (68.286,71.008,42.901)
C5': (66.416,74.064,43.162)
O4': (68.031,72.286,43.454)
C8: (66.359,70.194,44.360)
O2': (69.049,71.298,40.669)
C6: (66.989,66.786,44.966)
C5: (66.874,68.148,44.635)
C4: (67.883,68.695,43.854)
P: (64.414,74.095,44.915)
C4': (67.390,73.125,42.467)
C2': (67.880,71.047,41.427)
C2: (68.951,66.772,43.746)
N1: (68.057,66.112,44.493)
N3: (68.965,68.052,43.374)
N6: (66.108,66.132,45.722)
N7: (65.916,69.106,44.945)
N9: (67.541,70.017,43.674)
O5': (65.369,73.335,43.875)
O3': (66.695,72.803,40.150)
C2: (74.257,69.573,43.512)
OP1: (73.418,63.012,39.186)
OP2: (75.601,63.852,40.281)
C4: (76.458,68.807,43.400)
O5': (73.435,64.894,40.870)
C3': (72.081,67.508,40.478)
C1': (72.362,68.119,42.735)
O4': (72.121,66.722,42.666)
C5': (72.008,64.977,40.975)
P: (74.146,63.559,40.368)
O2: (73.431,70.452,43.793)
C4': (71.586,66.380,41.356)
C2': (71.878,68.697,41.402)
O2': (70.494,68.994,41.513)
N1: (73.813,68.339,42.978)
N3: (75.585,69.768,43.708)
N4: (77.754,69.065,43.585)
C6: (74.723,67.359,42.685)
C5: (76.040,67.546,42.879)
O3': (71.320,67.632,39.283)
OP1: (73.418,63.012,39.186)
OP2: (75.601,63.852,40.281)
C4: (76.458,68.807,43.400)
O5': (73.435,64.894,40.870)
C3': (72.081,67.508,40.478)
C1': (72.362,68.119,42.735)
O4': (72.121,66.722,42.666)
C5': (72.008,64.977,40.975)
P: (74.146,63.559,40.368)
O2: (73.431,70.452,43.793)
C4': (71.586,66.380,41.356)
C2': (71.878,68.697,41.402)
O2': (70.494,68.994,41.513)
N1: (73.813,68.339,42.978)
N3: (75.585,69.768,43.708)
N4: (77.754,69.065,43.585)
C6: (74.723,67.359,42.685)
C5: (76.040,67.546,42.879)
O3': (71.320,67.632,39.283)
Image (generated by PyMOL):