Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A643:A2308
Extra
PDB:
ATOM 1 O3' A A 642 108.705 -53.084 -73.022 1.00 57.69 O
ATOM 2 P A A 643 108.897 -54.310 -74.036 1.00 54.63 P
ATOM 3 OP1 A A 643 107.620 -55.071 -73.997 1.00 58.46 O
ATOM 4 OP2 A A 643 110.169 -54.983 -73.652 1.00 50.85 O
ATOM 5 O5' A A 643 108.975 -53.634 -75.474 1.00 55.98 O
ATOM 6 C5' A A 643 107.841 -52.948 -75.975 1.00 59.57 C
ATOM 7 C4' A A 643 108.256 -51.753 -76.789 1.00 58.50 C
ATOM 8 O4' A A 643 109.247 -50.978 -76.073 1.00 57.99 O
ATOM 9 C3' A A 643 108.888 -52.050 -78.135 1.00 60.34 C
ATOM 10 O3' A A 643 107.848 -52.216 -79.081 1.00 61.70 O
ATOM 11 C2' A A 643 109.699 -50.787 -78.411 1.00 63.30 C
ATOM 12 O2' A A 643 108.923 -49.762 -78.992 1.00 65.49 O
ATOM 13 C1' A A 643 110.124 -50.363 -76.999 1.00 61.53 C
ATOM 14 N9 A A 643 111.499 -50.732 -76.660 1.00 61.61 N
ATOM 15 C8 A A 643 111.914 -51.648 -75.727 1.00 65.06 C
ATOM 16 N7 A A 643 113.215 -51.754 -75.635 1.00 67.04 N
ATOM 17 C5 A A 643 113.692 -50.856 -76.570 1.00 63.85 C
ATOM 18 C6 A A 643 114.978 -50.507 -76.954 1.00 64.58 C
ATOM 19 N6 A A 643 116.077 -51.045 -76.418 1.00 63.85 N
ATOM 20 N1 A A 643 115.114 -49.577 -77.913 1.00 64.69 N
ATOM 21 C2 A A 643 114.014 -49.040 -78.443 1.00 66.22 C
ATOM 22 N3 A A 643 112.745 -49.285 -78.170 1.00 64.60 N
ATOM 23 C4 A A 643 112.648 -50.217 -77.211 1.00 62.20 C
ATOM 24 P A A 644 107.862 -53.468 -80.071 1.00 64.04 P
ATOM 25 OP1 A A 644 106.450 -53.862 -80.272 1.00 66.36 O
ATOM 26 OP2 A A 644 108.846 -54.470 -79.596 1.00 58.23 O
ATOM 27 O5' A A 644 108.357 -52.802 -81.419 1.00 62.59 O
TER
ATOM 1 O3' C B2307 115.762 -43.475 -82.518 1.00 79.33 O
ATOM 2 P C B2308 114.238 -43.024 -82.629 1.00 77.16 P
ATOM 3 OP1 C B2308 113.743 -43.155 -84.030 1.00 69.94 O
ATOM 4 OP2 C B2308 114.215 -41.692 -81.941 1.00 63.04 O
ATOM 5 O5' C B2308 113.503 -44.105 -81.723 1.00 81.75 O
ATOM 6 C5' C B2308 113.913 -45.475 -81.747 1.00 74.08 C
ATOM 7 C4' C B2308 113.039 -46.295 -80.832 1.00 71.19 C
ATOM 8 O4' C B2308 113.337 -45.957 -79.451 1.00 64.37 O
ATOM 9 C3' C B2308 111.553 -46.017 -80.995 1.00 69.46 C
ATOM 10 O3' C B2308 110.958 -46.755 -82.063 1.00 67.98 O
ATOM 11 C2' C B2308 111.001 -46.337 -79.614 1.00 64.14 C
ATOM 12 O2' C B2308 110.796 -47.724 -79.414 1.00 64.93 O
ATOM 13 C1' C B2308 112.136 -45.839 -78.715 1.00 60.24 C
ATOM 14 N1 C B2308 111.997 -44.418 -78.358 1.00 58.47 N
ATOM 15 C2 C B2308 110.936 -44.006 -77.557 1.00 60.07 C
ATOM 16 O2 C B2308 110.115 -44.846 -77.169 1.00 62.01 O
ATOM 17 N3 C B2308 110.829 -42.697 -77.230 1.00 62.36 N
ATOM 18 C4 C B2308 111.734 -41.819 -77.678 1.00 61.46 C
ATOM 19 N4 C B2308 111.607 -40.548 -77.324 1.00 65.58 N
ATOM 20 C5 C B2308 112.813 -42.213 -78.505 1.00 63.23 C
ATOM 21 C6 C B2308 112.909 -43.506 -78.814 1.00 65.85 C
ATOM 22 P C B2309 109.875 -46.035 -83.000 1.00 62.06 P
ATOM 23 OP1 C B2309 109.773 -46.782 -84.271 1.00 61.00 O
ATOM 24 OP2 C B2309 110.254 -44.590 -83.024 1.00 63.24 O
ATOM 25 O5' C B2309 108.515 -46.216 -82.190 1.00 68.00 O
TER
ATOM 2 P A A 643 108.897 -54.310 -74.036 1.00 54.63 P
ATOM 3 OP1 A A 643 107.620 -55.071 -73.997 1.00 58.46 O
ATOM 4 OP2 A A 643 110.169 -54.983 -73.652 1.00 50.85 O
ATOM 5 O5' A A 643 108.975 -53.634 -75.474 1.00 55.98 O
ATOM 6 C5' A A 643 107.841 -52.948 -75.975 1.00 59.57 C
ATOM 7 C4' A A 643 108.256 -51.753 -76.789 1.00 58.50 C
ATOM 8 O4' A A 643 109.247 -50.978 -76.073 1.00 57.99 O
ATOM 9 C3' A A 643 108.888 -52.050 -78.135 1.00 60.34 C
ATOM 10 O3' A A 643 107.848 -52.216 -79.081 1.00 61.70 O
ATOM 11 C2' A A 643 109.699 -50.787 -78.411 1.00 63.30 C
ATOM 12 O2' A A 643 108.923 -49.762 -78.992 1.00 65.49 O
ATOM 13 C1' A A 643 110.124 -50.363 -76.999 1.00 61.53 C
ATOM 14 N9 A A 643 111.499 -50.732 -76.660 1.00 61.61 N
ATOM 15 C8 A A 643 111.914 -51.648 -75.727 1.00 65.06 C
ATOM 16 N7 A A 643 113.215 -51.754 -75.635 1.00 67.04 N
ATOM 17 C5 A A 643 113.692 -50.856 -76.570 1.00 63.85 C
ATOM 18 C6 A A 643 114.978 -50.507 -76.954 1.00 64.58 C
ATOM 19 N6 A A 643 116.077 -51.045 -76.418 1.00 63.85 N
ATOM 20 N1 A A 643 115.114 -49.577 -77.913 1.00 64.69 N
ATOM 21 C2 A A 643 114.014 -49.040 -78.443 1.00 66.22 C
ATOM 22 N3 A A 643 112.745 -49.285 -78.170 1.00 64.60 N
ATOM 23 C4 A A 643 112.648 -50.217 -77.211 1.00 62.20 C
ATOM 24 P A A 644 107.862 -53.468 -80.071 1.00 64.04 P
ATOM 25 OP1 A A 644 106.450 -53.862 -80.272 1.00 66.36 O
ATOM 26 OP2 A A 644 108.846 -54.470 -79.596 1.00 58.23 O
ATOM 27 O5' A A 644 108.357 -52.802 -81.419 1.00 62.59 O
TER
ATOM 1 O3' C B2307 115.762 -43.475 -82.518 1.00 79.33 O
ATOM 2 P C B2308 114.238 -43.024 -82.629 1.00 77.16 P
ATOM 3 OP1 C B2308 113.743 -43.155 -84.030 1.00 69.94 O
ATOM 4 OP2 C B2308 114.215 -41.692 -81.941 1.00 63.04 O
ATOM 5 O5' C B2308 113.503 -44.105 -81.723 1.00 81.75 O
ATOM 6 C5' C B2308 113.913 -45.475 -81.747 1.00 74.08 C
ATOM 7 C4' C B2308 113.039 -46.295 -80.832 1.00 71.19 C
ATOM 8 O4' C B2308 113.337 -45.957 -79.451 1.00 64.37 O
ATOM 9 C3' C B2308 111.553 -46.017 -80.995 1.00 69.46 C
ATOM 10 O3' C B2308 110.958 -46.755 -82.063 1.00 67.98 O
ATOM 11 C2' C B2308 111.001 -46.337 -79.614 1.00 64.14 C
ATOM 12 O2' C B2308 110.796 -47.724 -79.414 1.00 64.93 O
ATOM 13 C1' C B2308 112.136 -45.839 -78.715 1.00 60.24 C
ATOM 14 N1 C B2308 111.997 -44.418 -78.358 1.00 58.47 N
ATOM 15 C2 C B2308 110.936 -44.006 -77.557 1.00 60.07 C
ATOM 16 O2 C B2308 110.115 -44.846 -77.169 1.00 62.01 O
ATOM 17 N3 C B2308 110.829 -42.697 -77.230 1.00 62.36 N
ATOM 18 C4 C B2308 111.734 -41.819 -77.678 1.00 61.46 C
ATOM 19 N4 C B2308 111.607 -40.548 -77.324 1.00 65.58 N
ATOM 20 C5 C B2308 112.813 -42.213 -78.505 1.00 63.23 C
ATOM 21 C6 C B2308 112.909 -43.506 -78.814 1.00 65.85 C
ATOM 22 P C B2309 109.875 -46.035 -83.000 1.00 62.06 P
ATOM 23 OP1 C B2309 109.773 -46.782 -84.271 1.00 61.00 O
ATOM 24 OP2 C B2309 110.254 -44.590 -83.024 1.00 63.24 O
ATOM 25 O5' C B2309 108.515 -46.216 -82.190 1.00 68.00 O
TER
Atoms:
OP1: (107.620,-55.071,-73.997)
OP2: (110.169,-54.983,-73.652)
C3': (108.888,-52.050,-78.135)
C1': (110.124,-50.363,-76.999)
C5': (107.841,-52.948,-75.975)
O4': (109.247,-50.978,-76.073)
C8: (111.914,-51.648,-75.727)
O2': (108.923,-49.762,-78.992)
C6: (114.978,-50.507,-76.954)
C5: (113.692,-50.856,-76.570)
C4: (112.648,-50.217,-77.211)
P: (108.897,-54.310,-74.036)
C4': (108.256,-51.753,-76.789)
C2': (109.699,-50.787,-78.411)
C2: (114.014,-49.040,-78.443)
N1: (115.114,-49.577,-77.913)
N3: (112.745,-49.285,-78.170)
N6: (116.077,-51.045,-76.418)
N7: (113.215,-51.754,-75.635)
N9: (111.499,-50.732,-76.660)
O5': (108.975,-53.634,-75.474)
O3': (107.848,-52.216,-79.081)
OP2: (110.169,-54.983,-73.652)
C3': (108.888,-52.050,-78.135)
C1': (110.124,-50.363,-76.999)
C5': (107.841,-52.948,-75.975)
O4': (109.247,-50.978,-76.073)
C8: (111.914,-51.648,-75.727)
O2': (108.923,-49.762,-78.992)
C6: (114.978,-50.507,-76.954)
C5: (113.692,-50.856,-76.570)
C4: (112.648,-50.217,-77.211)
P: (108.897,-54.310,-74.036)
C4': (108.256,-51.753,-76.789)
C2': (109.699,-50.787,-78.411)
C2: (114.014,-49.040,-78.443)
N1: (115.114,-49.577,-77.913)
N3: (112.745,-49.285,-78.170)
N6: (116.077,-51.045,-76.418)
N7: (113.215,-51.754,-75.635)
N9: (111.499,-50.732,-76.660)
O5': (108.975,-53.634,-75.474)
O3': (107.848,-52.216,-79.081)
C2: (110.936,-44.006,-77.557)
OP1: (113.743,-43.155,-84.030)
OP2: (114.215,-41.692,-81.941)
C4: (111.734,-41.819,-77.678)
O5': (113.503,-44.105,-81.723)
C3': (111.553,-46.017,-80.995)
C1': (112.136,-45.839,-78.715)
O4': (113.337,-45.957,-79.451)
C5': (113.913,-45.475,-81.747)
P: (114.238,-43.024,-82.629)
O2: (110.115,-44.846,-77.169)
C4': (113.039,-46.295,-80.832)
C2': (111.001,-46.337,-79.614)
O2': (110.796,-47.724,-79.414)
N1: (111.997,-44.418,-78.358)
N3: (110.829,-42.697,-77.230)
N4: (111.607,-40.548,-77.324)
C6: (112.909,-43.506,-78.814)
C5: (112.813,-42.213,-78.505)
O3': (110.958,-46.755,-82.063)
OP1: (113.743,-43.155,-84.030)
OP2: (114.215,-41.692,-81.941)
C4: (111.734,-41.819,-77.678)
O5': (113.503,-44.105,-81.723)
C3': (111.553,-46.017,-80.995)
C1': (112.136,-45.839,-78.715)
O4': (113.337,-45.957,-79.451)
C5': (113.913,-45.475,-81.747)
P: (114.238,-43.024,-82.629)
O2: (110.115,-44.846,-77.169)
C4': (113.039,-46.295,-80.832)
C2': (111.001,-46.337,-79.614)
O2': (110.796,-47.724,-79.414)
N1: (111.997,-44.418,-78.358)
N3: (110.829,-42.697,-77.230)
N4: (111.607,-40.548,-77.324)
C6: (112.909,-43.506,-78.814)
C5: (112.813,-42.213,-78.505)
O3': (110.958,-46.755,-82.063)
Image (generated by PyMOL):