Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1563:1436
Extra
PDB:
ATOM 1 O3' C A 562 103.551 18.408 37.152 1.00 68.98 O
ATOM 2 P A A 563 104.675 18.745 38.250 1.00 70.62 P
ATOM 3 OP1 A A 563 104.189 19.955 39.003 1.00 70.59 O
ATOM 4 OP2 A A 563 105.975 18.815 37.530 1.00 71.05 O
ATOM 5 O5' A A 563 104.659 17.464 39.210 1.00 70.33 O
ATOM 6 C5' A A 563 104.762 17.598 40.624 1.00 70.23 C
ATOM 7 C4' A A 563 104.676 16.257 41.307 1.00 69.96 C
ATOM 8 O4' A A 563 104.430 15.261 40.282 1.00 69.88 O
ATOM 9 C3' A A 563 105.945 15.763 42.002 1.00 70.16 C
ATOM 10 O3' A A 563 106.153 16.198 43.380 1.00 70.15 O
ATOM 11 C2' A A 563 105.823 14.242 41.858 1.00 69.96 C
ATOM 12 O2' A A 563 104.900 13.717 42.792 1.00 69.58 O
ATOM 13 C1' A A 563 105.225 14.125 40.474 1.00 69.93 C
ATOM 14 N9 A A 563 106.274 14.119 39.433 1.00 70.32 N
ATOM 15 C8 A A 563 106.601 15.152 38.553 1.00 70.62 C
ATOM 16 N7 A A 563 107.624 14.904 37.748 1.00 70.96 N
ATOM 17 C5 A A 563 108.019 13.615 38.125 1.00 70.87 C
ATOM 18 C6 A A 563 109.065 12.784 37.652 1.00 71.13 C
ATOM 19 N6 A A 563 109.894 13.153 36.672 1.00 71.51 N
ATOM 20 N1 A A 563 109.197 11.555 38.220 1.00 70.98 N
ATOM 21 C2 A A 563 108.342 11.205 39.217 1.00 70.60 C
ATOM 22 N3 A A 563 107.322 11.899 39.763 1.00 70.33 N
ATOM 23 C4 A A 563 107.199 13.114 39.160 1.00 70.48 C
ATOM 24 P U A 564 105.532 17.562 44.020 1.00 94.47 P
ATOM 25 OP1 U A 564 105.692 18.657 43.013 1.00 94.75 O
ATOM 26 OP2 U A 564 106.184 17.733 45.356 1.00 94.56 O
ATOM 27 O5' U A 564 103.966 17.165 44.216 1.00 94.00 O
TER
ATOM 1 O3' A B 435 105.086 4.739 46.415 1.00116.98 O
ATOM 2 P C B 436 106.626 4.890 46.847 1.00159.73 P
ATOM 3 OP1 C B 436 107.116 3.532 47.196 1.00159.77 O
ATOM 4 OP2 C B 436 106.689 5.959 47.878 1.00159.75 O
ATOM 5 O5' C B 436 107.314 5.393 45.497 1.00160.04 O
ATOM 6 C5' C B 436 107.387 6.778 45.194 1.00160.17 C
ATOM 7 C4' C B 436 106.981 7.082 43.764 1.00160.19 C
ATOM 8 O4' C B 436 106.018 8.157 43.768 1.00160.01 O
ATOM 9 C3' C B 436 108.122 7.535 42.841 1.00160.62 C
ATOM 10 O3' C B 436 108.380 6.636 41.775 1.00160.73 O
ATOM 11 C2' C B 436 107.765 8.938 42.360 1.00160.67 C
ATOM 12 O2' C B 436 107.378 8.931 40.995 1.00160.69 O
ATOM 13 C1' C B 436 106.568 9.321 43.222 1.00160.30 C
ATOM 14 N1 C B 436 106.932 10.206 44.347 1.00160.38 N
ATOM 15 C2 C B 436 107.886 11.248 44.300 1.00160.74 C
ATOM 16 O2 C B 436 108.571 11.529 43.289 1.00161.03 O
ATOM 17 N3 C B 436 108.057 11.955 45.440 1.00160.77 N
ATOM 18 C4 C B 436 107.348 11.689 46.540 1.00160.47 C
ATOM 19 N4 C B 436 107.578 12.437 47.610 1.00160.54 N
ATOM 20 C5 C B 436 106.379 10.658 46.615 1.00160.10 C
ATOM 21 C6 C B 436 106.212 9.964 45.495 1.00160.07 C
ATOM 22 P A B 437 109.331 5.372 41.992 1.00200.59 P
ATOM 23 OP1 A B 437 108.736 4.256 41.238 1.00200.44 O
ATOM 24 OP2 A B 437 109.476 5.206 43.423 1.00200.50 O
ATOM 25 O5' A B 437 110.714 5.849 41.308 1.00201.08 O
TER
ATOM 2 P A A 563 104.675 18.745 38.250 1.00 70.62 P
ATOM 3 OP1 A A 563 104.189 19.955 39.003 1.00 70.59 O
ATOM 4 OP2 A A 563 105.975 18.815 37.530 1.00 71.05 O
ATOM 5 O5' A A 563 104.659 17.464 39.210 1.00 70.33 O
ATOM 6 C5' A A 563 104.762 17.598 40.624 1.00 70.23 C
ATOM 7 C4' A A 563 104.676 16.257 41.307 1.00 69.96 C
ATOM 8 O4' A A 563 104.430 15.261 40.282 1.00 69.88 O
ATOM 9 C3' A A 563 105.945 15.763 42.002 1.00 70.16 C
ATOM 10 O3' A A 563 106.153 16.198 43.380 1.00 70.15 O
ATOM 11 C2' A A 563 105.823 14.242 41.858 1.00 69.96 C
ATOM 12 O2' A A 563 104.900 13.717 42.792 1.00 69.58 O
ATOM 13 C1' A A 563 105.225 14.125 40.474 1.00 69.93 C
ATOM 14 N9 A A 563 106.274 14.119 39.433 1.00 70.32 N
ATOM 15 C8 A A 563 106.601 15.152 38.553 1.00 70.62 C
ATOM 16 N7 A A 563 107.624 14.904 37.748 1.00 70.96 N
ATOM 17 C5 A A 563 108.019 13.615 38.125 1.00 70.87 C
ATOM 18 C6 A A 563 109.065 12.784 37.652 1.00 71.13 C
ATOM 19 N6 A A 563 109.894 13.153 36.672 1.00 71.51 N
ATOM 20 N1 A A 563 109.197 11.555 38.220 1.00 70.98 N
ATOM 21 C2 A A 563 108.342 11.205 39.217 1.00 70.60 C
ATOM 22 N3 A A 563 107.322 11.899 39.763 1.00 70.33 N
ATOM 23 C4 A A 563 107.199 13.114 39.160 1.00 70.48 C
ATOM 24 P U A 564 105.532 17.562 44.020 1.00 94.47 P
ATOM 25 OP1 U A 564 105.692 18.657 43.013 1.00 94.75 O
ATOM 26 OP2 U A 564 106.184 17.733 45.356 1.00 94.56 O
ATOM 27 O5' U A 564 103.966 17.165 44.216 1.00 94.00 O
TER
ATOM 1 O3' A B 435 105.086 4.739 46.415 1.00116.98 O
ATOM 2 P C B 436 106.626 4.890 46.847 1.00159.73 P
ATOM 3 OP1 C B 436 107.116 3.532 47.196 1.00159.77 O
ATOM 4 OP2 C B 436 106.689 5.959 47.878 1.00159.75 O
ATOM 5 O5' C B 436 107.314 5.393 45.497 1.00160.04 O
ATOM 6 C5' C B 436 107.387 6.778 45.194 1.00160.17 C
ATOM 7 C4' C B 436 106.981 7.082 43.764 1.00160.19 C
ATOM 8 O4' C B 436 106.018 8.157 43.768 1.00160.01 O
ATOM 9 C3' C B 436 108.122 7.535 42.841 1.00160.62 C
ATOM 10 O3' C B 436 108.380 6.636 41.775 1.00160.73 O
ATOM 11 C2' C B 436 107.765 8.938 42.360 1.00160.67 C
ATOM 12 O2' C B 436 107.378 8.931 40.995 1.00160.69 O
ATOM 13 C1' C B 436 106.568 9.321 43.222 1.00160.30 C
ATOM 14 N1 C B 436 106.932 10.206 44.347 1.00160.38 N
ATOM 15 C2 C B 436 107.886 11.248 44.300 1.00160.74 C
ATOM 16 O2 C B 436 108.571 11.529 43.289 1.00161.03 O
ATOM 17 N3 C B 436 108.057 11.955 45.440 1.00160.77 N
ATOM 18 C4 C B 436 107.348 11.689 46.540 1.00160.47 C
ATOM 19 N4 C B 436 107.578 12.437 47.610 1.00160.54 N
ATOM 20 C5 C B 436 106.379 10.658 46.615 1.00160.10 C
ATOM 21 C6 C B 436 106.212 9.964 45.495 1.00160.07 C
ATOM 22 P A B 437 109.331 5.372 41.992 1.00200.59 P
ATOM 23 OP1 A B 437 108.736 4.256 41.238 1.00200.44 O
ATOM 24 OP2 A B 437 109.476 5.206 43.423 1.00200.50 O
ATOM 25 O5' A B 437 110.714 5.849 41.308 1.00201.08 O
TER
Atoms:
OP1: (104.189,19.955,39.003)
OP2: (105.975,18.815,37.530)
C3': (105.945,15.763,42.002)
C1': (105.225,14.125,40.474)
C5': (104.762,17.598,40.624)
O4': (104.430,15.261,40.282)
C8: (106.601,15.152,38.553)
O2': (104.900,13.717,42.792)
C6: (109.065,12.784,37.652)
C5: (108.019,13.615,38.125)
C4: (107.199,13.114,39.160)
P: (104.675,18.745,38.250)
C4': (104.676,16.257,41.307)
C2': (105.823,14.242,41.858)
C2: (108.342,11.205,39.217)
N1: (109.197,11.555,38.220)
N3: (107.322,11.899,39.763)
N6: (109.894,13.153,36.672)
N7: (107.624,14.904,37.748)
N9: (106.274,14.119,39.433)
O5': (104.659,17.464,39.210)
O3': (106.153,16.198,43.380)
OP2: (105.975,18.815,37.530)
C3': (105.945,15.763,42.002)
C1': (105.225,14.125,40.474)
C5': (104.762,17.598,40.624)
O4': (104.430,15.261,40.282)
C8: (106.601,15.152,38.553)
O2': (104.900,13.717,42.792)
C6: (109.065,12.784,37.652)
C5: (108.019,13.615,38.125)
C4: (107.199,13.114,39.160)
P: (104.675,18.745,38.250)
C4': (104.676,16.257,41.307)
C2': (105.823,14.242,41.858)
C2: (108.342,11.205,39.217)
N1: (109.197,11.555,38.220)
N3: (107.322,11.899,39.763)
N6: (109.894,13.153,36.672)
N7: (107.624,14.904,37.748)
N9: (106.274,14.119,39.433)
O5': (104.659,17.464,39.210)
O3': (106.153,16.198,43.380)
C2: (107.886,11.248,44.300)
OP1: (107.116,3.532,47.196)
OP2: (106.689,5.959,47.878)
C4: (107.348,11.689,46.540)
O5': (107.314,5.393,45.497)
C3': (108.122,7.535,42.841)
C1': (106.568,9.321,43.222)
O4': (106.018,8.157,43.768)
C5': (107.387,6.778,45.194)
P: (106.626,4.890,46.847)
O2: (108.571,11.529,43.289)
C4': (106.981,7.082,43.764)
C2': (107.765,8.938,42.360)
O2': (107.378,8.931,40.995)
N1: (106.932,10.206,44.347)
N3: (108.057,11.955,45.440)
N4: (107.578,12.437,47.610)
C6: (106.212,9.964,45.495)
C5: (106.379,10.658,46.615)
O3': (108.380,6.636,41.775)
OP1: (107.116,3.532,47.196)
OP2: (106.689,5.959,47.878)
C4: (107.348,11.689,46.540)
O5': (107.314,5.393,45.497)
C3': (108.122,7.535,42.841)
C1': (106.568,9.321,43.222)
O4': (106.018,8.157,43.768)
C5': (107.387,6.778,45.194)
P: (106.626,4.890,46.847)
O2: (108.571,11.529,43.289)
C4': (106.981,7.082,43.764)
C2': (107.765,8.938,42.360)
O2': (107.378,8.931,40.995)
N1: (106.932,10.206,44.347)
N3: (108.057,11.955,45.440)
N4: (107.578,12.437,47.610)
C6: (106.212,9.964,45.495)
C5: (106.379,10.658,46.615)
O3': (108.380,6.636,41.775)
Image (generated by PyMOL):