ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1JJ2:0423:0223

Extra

PDB:
ATOM 1 O3' U A 422 66.548 115.656 15.822 1.00 32.48 O
ATOM 2 P A A 423 65.523 115.363 17.020 1.00 32.53 P
ATOM 3 OP1 A A 423 65.712 116.387 18.063 1.00 33.59 O
ATOM 4 OP2 A A 423 65.652 113.927 17.370 1.00 34.36 O
ATOM 5 O5' A A 423 64.084 115.600 16.389 1.00 31.51 O
ATOM 6 C5' A A 423 63.745 116.825 15.710 1.00 31.32 C
ATOM 7 C4' A A 423 62.437 116.642 14.985 1.00 32.01 C
ATOM 8 O4' A A 423 62.597 115.573 14.020 1.00 32.87 O
ATOM 9 C3' A A 423 61.312 116.183 15.898 1.00 34.28 C
ATOM 10 O3' A A 423 60.634 117.314 16.433 1.00 37.01 O
ATOM 11 C2' A A 423 60.430 115.353 14.976 1.00 34.19 C
ATOM 12 O2' A A 423 59.555 116.139 14.198 1.00 37.26 O
ATOM 13 C1' A A 423 61.468 114.716 14.054 1.00 32.96 C
ATOM 14 N9 A A 423 61.925 113.387 14.457 1.00 34.69 N
ATOM 15 C8 A A 423 63.133 113.060 15.029 1.00 34.31 C
ATOM 16 N7 A A 423 63.298 111.777 15.221 1.00 33.60 N
ATOM 17 C5 A A 423 62.116 111.217 14.762 1.00 34.17 C
ATOM 18 C6 A A 423 61.676 109.890 14.677 1.00 34.06 C
ATOM 19 N6 A A 423 62.406 108.842 15.060 1.00 34.02 N
ATOM 20 N1 A A 423 60.448 109.671 14.172 1.00 36.96 N
ATOM 21 C2 A A 423 59.719 110.725 13.776 1.00 37.71 C
ATOM 22 N3 A A 423 60.026 112.018 13.798 1.00 35.37 N
ATOM 23 C4 A A 423 61.253 112.199 14.306 1.00 34.36 C
ATOM 24 P A A 424 59.832 117.188 17.815 1.00 37.97 P
ATOM 25 OP1 A A 424 59.013 118.416 17.937 1.00 39.42 O
ATOM 26 OP2 A A 424 60.774 116.826 18.899 1.00 40.50 O
ATOM 27 O5' A A 424 58.879 115.933 17.586 1.00 40.69 O
TER

ATOM 1 O3' A B 222 53.275 110.131 16.618 1.00 40.18 O
ATOM 2 P C B 223 53.400 110.015 15.020 1.00 41.07 P
ATOM 3 OP1 C B 223 53.191 111.383 14.484 1.00 43.38 O
ATOM 4 OP2 C B 223 52.565 108.899 14.521 1.00 41.56 O
ATOM 5 O5' C B 223 54.924 109.622 14.826 1.00 39.77 O
ATOM 6 C5' C B 223 55.332 108.783 13.761 1.00 38.51 C
ATOM 7 C4' C B 223 56.679 108.198 14.071 1.00 38.96 C
ATOM 8 O4' C B 223 56.580 107.247 15.164 1.00 39.39 O
ATOM 9 C3' C B 223 57.252 107.392 12.932 1.00 38.32 C
ATOM 10 O3' C B 223 57.832 108.289 11.998 1.00 39.34 O
ATOM 11 C2' C B 223 58.241 106.483 13.645 1.00 37.64 C
ATOM 12 O2' C B 223 59.446 107.128 13.989 1.00 38.38 O
ATOM 13 C1' C B 223 57.471 106.162 14.929 1.00 38.93 C
ATOM 14 N1 C B 223 56.688 104.911 14.823 1.00 38.68 N
ATOM 15 C2 C B 223 57.375 103.687 14.786 1.00 38.91 C
ATOM 16 O2 C B 223 58.610 103.682 14.875 1.00 41.04 O
ATOM 17 N3 C B 223 56.677 102.541 14.655 1.00 40.48 N
ATOM 18 C4 C B 223 55.347 102.574 14.566 1.00 40.75 C
ATOM 19 N4 C B 223 54.708 101.410 14.416 1.00 42.14 N
ATOM 20 C5 C B 223 54.616 103.800 14.621 1.00 38.61 C
ATOM 21 C6 C B 223 55.320 104.934 14.748 1.00 38.88 C
ATOM 22 P A B 224 58.062 107.825 10.484 1.00 37.42 P
ATOM 23 OP1 A B 224 58.327 109.062 9.711 1.00 40.89 O
ATOM 24 OP2 A B 224 56.934 106.944 10.098 1.00 38.94 O
ATOM 25 O5' A B 224 59.401 106.970 10.587 1.00 35.17 O
TER

Atoms:
OP1: (65.712,116.387,18.063)
OP2: (65.652,113.927,17.370)
C3': (61.312,116.183,15.898)
C1': (61.468,114.716,14.054)
C5': (63.745,116.825,15.710)
O4': (62.597,115.573,14.020)
C8: (63.133,113.060,15.029)
O2': (59.555,116.139,14.198)
C6: (61.676,109.890,14.677)
C5: (62.116,111.217,14.762)
C4: (61.253,112.199,14.306)
P: (65.523,115.363,17.020)
C4': (62.437,116.642,14.985)
C2': (60.430,115.353,14.976)
C2: (59.719,110.725,13.776)
N1: (60.448,109.671,14.172)
N3: (60.026,112.018,13.798)
N6: (62.406,108.842,15.060)
N7: (63.298,111.777,15.221)
N9: (61.925,113.387,14.457)
O5': (64.084,115.600,16.389)
O3': (60.634,117.314,16.433)
C2: (57.375,103.687,14.786)
OP1: (53.191,111.383,14.484)
OP2: (52.565,108.899,14.521)
C4: (55.347,102.574,14.566)
O5': (54.924,109.622,14.826)
C3': (57.252,107.392,12.932)
C1': (57.471,106.162,14.929)
O4': (56.580,107.247,15.164)
C5': (55.332,108.783,13.761)
P: (53.400,110.015,15.020)
O2: (58.610,103.682,14.875)
C4': (56.679,108.198,14.071)
C2': (58.241,106.483,13.645)
O2': (59.446,107.128,13.989)
N1: (56.688,104.911,14.823)
N3: (56.677,102.541,14.655)
N4: (54.708,101.410,14.416)
C6: (55.320,104.934,14.748)
C5: (54.616,103.800,14.621)
O3': (57.832,108.289,11.998)
Image (generated by PyMOL):
PyMOL image
show in jmol