Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0681:02281
Extra
PDB:
ATOM 1 O3' A A 680 65.130 74.337 45.673 1.00 37.58 O
ATOM 2 P A A 681 64.158 73.849 44.501 1.00 38.50 P
ATOM 3 OP1 A A 681 63.543 75.041 43.866 1.00 37.54 O
ATOM 4 OP2 A A 681 63.285 72.808 45.093 1.00 41.15 O
ATOM 5 O5' A A 681 65.143 73.169 43.454 1.00 36.70 O
ATOM 6 C5' A A 681 66.122 73.953 42.766 1.00 38.51 C
ATOM 7 C4' A A 681 67.119 73.063 42.075 1.00 39.87 C
ATOM 8 O4' A A 681 67.734 72.202 43.060 1.00 40.26 O
ATOM 9 C3' A A 681 66.566 72.109 41.032 1.00 40.72 C
ATOM 10 O3' A A 681 66.429 72.766 39.774 1.00 42.36 O
ATOM 11 C2' A A 681 67.638 71.032 41.007 1.00 40.88 C
ATOM 12 O2' A A 681 68.799 71.452 40.329 1.00 40.60 O
ATOM 13 C1' A A 681 67.987 70.934 42.490 1.00 42.10 C
ATOM 14 N9 A A 681 67.171 69.951 43.201 1.00 45.60 N
ATOM 15 C8 A A 681 65.929 70.124 43.768 1.00 46.69 C
ATOM 16 N7 A A 681 65.457 69.048 44.348 1.00 46.83 N
ATOM 17 C5 A A 681 66.452 68.103 44.149 1.00 47.83 C
ATOM 18 C6 A A 681 66.558 66.763 44.520 1.00 49.19 C
ATOM 19 N6 A A 681 65.618 66.112 45.207 1.00 50.38 N
ATOM 20 N1 A A 681 67.676 66.098 44.158 1.00 50.57 N
ATOM 21 C2 A A 681 68.618 66.752 43.467 1.00 49.12 C
ATOM 22 N3 A A 681 68.636 68.012 43.064 1.00 48.54 N
ATOM 23 C4 A A 681 67.511 68.643 43.441 1.00 47.15 C
ATOM 24 P A A 682 65.389 72.209 38.682 1.00 42.89 P
ATOM 25 OP1 A A 682 65.453 73.140 37.529 1.00 43.24 O
ATOM 26 OP2 A A 682 64.088 71.970 39.348 1.00 42.25 O
ATOM 27 O5' A A 682 66.024 70.819 38.223 1.00 42.91 O
TER
ATOM 1 O3' C B2280 73.656 62.640 40.994 1.00 43.86 O
ATOM 2 P C B2281 74.016 63.621 39.773 1.00 45.76 P
ATOM 3 OP1 C B2281 73.394 63.053 38.545 1.00 45.92 O
ATOM 4 OP2 C B2281 75.481 63.859 39.809 1.00 44.93 O
ATOM 5 O5' C B2281 73.259 64.982 40.118 1.00 44.20 O
ATOM 6 C5' C B2281 71.817 65.027 40.198 1.00 42.07 C
ATOM 7 C4' C B2281 71.348 66.362 40.746 1.00 40.46 C
ATOM 8 O4' C B2281 71.875 66.564 42.084 1.00 39.54 O
ATOM 9 C3' C B2281 71.800 67.596 39.989 1.00 39.67 C
ATOM 10 O3' C B2281 70.990 67.825 38.846 1.00 39.78 O
ATOM 11 C2' C B2281 71.666 68.684 41.048 1.00 38.54 C
ATOM 12 O2' C B2281 70.339 69.100 41.294 1.00 36.30 O
ATOM 13 C1' C B2281 72.155 67.939 42.286 1.00 38.34 C
ATOM 14 N1 C B2281 73.604 68.099 42.502 1.00 38.64 N
ATOM 15 C2 C B2281 74.077 69.316 43.006 1.00 39.15 C
ATOM 16 O2 C B2281 73.264 70.222 43.241 1.00 41.06 O
ATOM 17 N3 C B2281 75.403 69.474 43.222 1.00 38.39 N
ATOM 18 C4 C B2281 76.244 68.476 42.954 1.00 38.32 C
ATOM 19 N4 C B2281 77.541 68.670 43.188 1.00 37.84 N
ATOM 20 C5 C B2281 75.791 67.228 42.434 1.00 39.57 C
ATOM 21 C6 C B2281 74.477 67.085 42.224 1.00 38.15 C
ATOM 22 P U B2282 71.643 68.449 37.517 1.00 38.53 P
ATOM 23 OP1 U B2282 70.531 68.576 36.540 1.00 38.15 O
ATOM 24 OP2 U B2282 72.860 67.680 37.151 1.00 37.63 O
ATOM 25 O5' U B2282 72.117 69.905 37.961 1.00 38.46 O
TER
ATOM 2 P A A 681 64.158 73.849 44.501 1.00 38.50 P
ATOM 3 OP1 A A 681 63.543 75.041 43.866 1.00 37.54 O
ATOM 4 OP2 A A 681 63.285 72.808 45.093 1.00 41.15 O
ATOM 5 O5' A A 681 65.143 73.169 43.454 1.00 36.70 O
ATOM 6 C5' A A 681 66.122 73.953 42.766 1.00 38.51 C
ATOM 7 C4' A A 681 67.119 73.063 42.075 1.00 39.87 C
ATOM 8 O4' A A 681 67.734 72.202 43.060 1.00 40.26 O
ATOM 9 C3' A A 681 66.566 72.109 41.032 1.00 40.72 C
ATOM 10 O3' A A 681 66.429 72.766 39.774 1.00 42.36 O
ATOM 11 C2' A A 681 67.638 71.032 41.007 1.00 40.88 C
ATOM 12 O2' A A 681 68.799 71.452 40.329 1.00 40.60 O
ATOM 13 C1' A A 681 67.987 70.934 42.490 1.00 42.10 C
ATOM 14 N9 A A 681 67.171 69.951 43.201 1.00 45.60 N
ATOM 15 C8 A A 681 65.929 70.124 43.768 1.00 46.69 C
ATOM 16 N7 A A 681 65.457 69.048 44.348 1.00 46.83 N
ATOM 17 C5 A A 681 66.452 68.103 44.149 1.00 47.83 C
ATOM 18 C6 A A 681 66.558 66.763 44.520 1.00 49.19 C
ATOM 19 N6 A A 681 65.618 66.112 45.207 1.00 50.38 N
ATOM 20 N1 A A 681 67.676 66.098 44.158 1.00 50.57 N
ATOM 21 C2 A A 681 68.618 66.752 43.467 1.00 49.12 C
ATOM 22 N3 A A 681 68.636 68.012 43.064 1.00 48.54 N
ATOM 23 C4 A A 681 67.511 68.643 43.441 1.00 47.15 C
ATOM 24 P A A 682 65.389 72.209 38.682 1.00 42.89 P
ATOM 25 OP1 A A 682 65.453 73.140 37.529 1.00 43.24 O
ATOM 26 OP2 A A 682 64.088 71.970 39.348 1.00 42.25 O
ATOM 27 O5' A A 682 66.024 70.819 38.223 1.00 42.91 O
TER
ATOM 1 O3' C B2280 73.656 62.640 40.994 1.00 43.86 O
ATOM 2 P C B2281 74.016 63.621 39.773 1.00 45.76 P
ATOM 3 OP1 C B2281 73.394 63.053 38.545 1.00 45.92 O
ATOM 4 OP2 C B2281 75.481 63.859 39.809 1.00 44.93 O
ATOM 5 O5' C B2281 73.259 64.982 40.118 1.00 44.20 O
ATOM 6 C5' C B2281 71.817 65.027 40.198 1.00 42.07 C
ATOM 7 C4' C B2281 71.348 66.362 40.746 1.00 40.46 C
ATOM 8 O4' C B2281 71.875 66.564 42.084 1.00 39.54 O
ATOM 9 C3' C B2281 71.800 67.596 39.989 1.00 39.67 C
ATOM 10 O3' C B2281 70.990 67.825 38.846 1.00 39.78 O
ATOM 11 C2' C B2281 71.666 68.684 41.048 1.00 38.54 C
ATOM 12 O2' C B2281 70.339 69.100 41.294 1.00 36.30 O
ATOM 13 C1' C B2281 72.155 67.939 42.286 1.00 38.34 C
ATOM 14 N1 C B2281 73.604 68.099 42.502 1.00 38.64 N
ATOM 15 C2 C B2281 74.077 69.316 43.006 1.00 39.15 C
ATOM 16 O2 C B2281 73.264 70.222 43.241 1.00 41.06 O
ATOM 17 N3 C B2281 75.403 69.474 43.222 1.00 38.39 N
ATOM 18 C4 C B2281 76.244 68.476 42.954 1.00 38.32 C
ATOM 19 N4 C B2281 77.541 68.670 43.188 1.00 37.84 N
ATOM 20 C5 C B2281 75.791 67.228 42.434 1.00 39.57 C
ATOM 21 C6 C B2281 74.477 67.085 42.224 1.00 38.15 C
ATOM 22 P U B2282 71.643 68.449 37.517 1.00 38.53 P
ATOM 23 OP1 U B2282 70.531 68.576 36.540 1.00 38.15 O
ATOM 24 OP2 U B2282 72.860 67.680 37.151 1.00 37.63 O
ATOM 25 O5' U B2282 72.117 69.905 37.961 1.00 38.46 O
TER
Atoms:
OP1: (63.543,75.041,43.866)
OP2: (63.285,72.808,45.093)
C3': (66.566,72.109,41.032)
C1': (67.987,70.934,42.490)
C5': (66.122,73.953,42.766)
O4': (67.734,72.202,43.060)
C8: (65.929,70.124,43.768)
O2': (68.799,71.452,40.329)
C6: (66.558,66.763,44.520)
C5: (66.452,68.103,44.149)
C4: (67.511,68.643,43.441)
P: (64.158,73.849,44.501)
C4': (67.119,73.063,42.075)
C2': (67.638,71.032,41.007)
C2: (68.618,66.752,43.467)
N1: (67.676,66.098,44.158)
N3: (68.636,68.012,43.064)
N6: (65.618,66.112,45.207)
N7: (65.457,69.048,44.348)
N9: (67.171,69.951,43.201)
O5': (65.143,73.169,43.454)
O3': (66.429,72.766,39.774)
OP2: (63.285,72.808,45.093)
C3': (66.566,72.109,41.032)
C1': (67.987,70.934,42.490)
C5': (66.122,73.953,42.766)
O4': (67.734,72.202,43.060)
C8: (65.929,70.124,43.768)
O2': (68.799,71.452,40.329)
C6: (66.558,66.763,44.520)
C5: (66.452,68.103,44.149)
C4: (67.511,68.643,43.441)
P: (64.158,73.849,44.501)
C4': (67.119,73.063,42.075)
C2': (67.638,71.032,41.007)
C2: (68.618,66.752,43.467)
N1: (67.676,66.098,44.158)
N3: (68.636,68.012,43.064)
N6: (65.618,66.112,45.207)
N7: (65.457,69.048,44.348)
N9: (67.171,69.951,43.201)
O5': (65.143,73.169,43.454)
O3': (66.429,72.766,39.774)
C2: (74.077,69.316,43.006)
OP1: (73.394,63.053,38.545)
OP2: (75.481,63.859,39.809)
C4: (76.244,68.476,42.954)
O5': (73.259,64.982,40.118)
C3': (71.800,67.596,39.989)
C1': (72.155,67.939,42.286)
O4': (71.875,66.564,42.084)
C5': (71.817,65.027,40.198)
P: (74.016,63.621,39.773)
O2: (73.264,70.222,43.241)
C4': (71.348,66.362,40.746)
C2': (71.666,68.684,41.048)
O2': (70.339,69.100,41.294)
N1: (73.604,68.099,42.502)
N3: (75.403,69.474,43.222)
N4: (77.541,68.670,43.188)
C6: (74.477,67.085,42.224)
C5: (75.791,67.228,42.434)
O3': (70.990,67.825,38.846)
OP1: (73.394,63.053,38.545)
OP2: (75.481,63.859,39.809)
C4: (76.244,68.476,42.954)
O5': (73.259,64.982,40.118)
C3': (71.800,67.596,39.989)
C1': (72.155,67.939,42.286)
O4': (71.875,66.564,42.084)
C5': (71.817,65.027,40.198)
P: (74.016,63.621,39.773)
O2: (73.264,70.222,43.241)
C4': (71.348,66.362,40.746)
C2': (71.666,68.684,41.048)
O2': (70.339,69.100,41.294)
N1: (73.604,68.099,42.502)
N3: (75.403,69.474,43.222)
N4: (77.541,68.670,43.188)
C6: (74.477,67.085,42.224)
C5: (75.791,67.228,42.434)
O3': (70.990,67.825,38.846)
Image (generated by PyMOL):