Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2023:A2492
Extra
PDB:
ATOM 1 O3' G A2022 -90.366 -79.190 0.006 1.00 0.01 O
ATOM 2 P A A2023 -90.980 -77.735 0.198 1.00 0.01 P
ATOM 3 OP1 A A2023 -92.015 -77.815 1.230 1.00 0.01 O
ATOM 4 OP2 A A2023 -91.362 -77.245 -1.129 1.00 0.01 O
ATOM 5 O5' A A2023 -89.744 -76.915 0.732 1.00 0.01 O
ATOM 6 C5' A A2023 -89.381 -76.935 2.103 1.00 0.01 C
ATOM 7 C4' A A2023 -88.165 -76.085 2.352 1.00 0.01 C
ATOM 8 O4' A A2023 -88.135 -75.660 3.740 1.00 0.01 O
ATOM 9 C3' A A2023 -86.823 -76.753 2.079 1.00 0.01 C
ATOM 10 O3' A A2023 -85.984 -75.853 1.355 1.00 0.01 O
ATOM 11 C2' A A2023 -86.270 -76.964 3.491 1.00 0.01 C
ATOM 12 O2' A A2023 -84.881 -76.985 3.583 1.00 0.01 O
ATOM 13 C1' A A2023 -86.828 -75.774 4.211 1.00 0.01 C
ATOM 14 N9 A A2023 -86.840 -75.890 5.677 1.00 0.01 N
ATOM 15 C8 A A2023 -87.414 -76.826 6.477 1.00 0.01 C
ATOM 16 N7 A A2023 -87.246 -76.606 7.754 1.00 0.01 N
ATOM 17 C5 A A2023 -86.495 -75.457 7.846 1.00 0.01 C
ATOM 18 C6 A A2023 -85.962 -74.713 8.942 1.00 0.01 C
ATOM 19 N6 A A2023 -86.072 -74.961 10.268 1.00 0.01 N
ATOM 20 N1 A A2023 -85.268 -73.610 8.599 1.00 0.01 N
ATOM 21 C2 A A2023 -85.101 -73.302 7.309 1.00 0.01 C
ATOM 22 N3 A A2023 -85.530 -73.927 6.226 1.00 0.01 N
ATOM 23 C4 A A2023 -86.239 -75.013 6.560 1.00 0.01 C
ATOM 24 P A A2024 -85.648 -76.091 -0.205 1.00 0.01 P
ATOM 25 OP1 A A2024 -85.311 -77.486 -0.362 1.00 0.01 O
ATOM 26 OP2 A A2024 -84.662 -75.071 -0.589 1.00 0.01 O
ATOM 27 O5' A A2024 -87.024 -75.806 -0.924 1.00 0.01 O
TER
ATOM 1 O3' C B2491 -89.118 -70.259 5.740 1.00 0.01 O
ATOM 2 P C B2492 -87.862 -69.582 6.430 1.00 0.01 P
ATOM 3 OP1 C B2492 -87.567 -70.354 7.653 1.00 0.01 O
ATOM 4 OP2 C B2492 -88.130 -68.138 6.545 1.00 0.01 O
ATOM 5 O5' C B2492 -86.755 -69.829 5.366 1.00 0.01 O
ATOM 6 C5' C B2492 -86.501 -71.121 4.906 1.00 0.01 C
ATOM 7 C4' C B2492 -85.319 -71.127 4.010 1.00 0.01 C
ATOM 8 O4' C B2492 -85.671 -70.527 2.765 1.00 0.01 O
ATOM 9 C3' C B2492 -84.154 -70.297 4.476 1.00 0.01 C
ATOM 10 O3' C B2492 -83.378 -70.954 5.444 1.00 0.01 O
ATOM 11 C2' C B2492 -83.421 -70.034 3.184 1.00 0.01 C
ATOM 12 O2' C B2492 -82.695 -71.179 2.783 1.00 0.01 O
ATOM 13 C1' C B2492 -84.572 -69.865 2.228 1.00 0.01 C
ATOM 14 N1 C B2492 -84.940 -68.483 2.022 1.00 0.01 N
ATOM 15 C2 C B2492 -84.203 -67.847 1.050 1.00 0.01 C
ATOM 16 O2 C B2492 -83.273 -68.501 0.534 1.00 0.01 O
ATOM 17 N3 C B2492 -84.541 -66.567 0.737 1.00 0.01 N
ATOM 18 C4 C B2492 -85.543 -65.959 1.348 1.00 0.01 C
ATOM 19 N4 C B2492 -85.776 -64.709 0.991 1.00 0.01 N
ATOM 20 C5 C B2492 -86.309 -66.608 2.346 1.00 0.01 C
ATOM 21 C6 C B2492 -85.989 -67.871 2.639 1.00 0.01 C
ATOM 22 P U B2493 -82.916 -70.174 6.726 1.00 0.01 P
ATOM 23 OP1 U B2493 -82.316 -71.137 7.619 1.00 0.01 O
ATOM 24 OP2 U B2493 -84.041 -69.407 7.196 1.00 0.01 O
ATOM 25 O5' U B2493 -81.807 -69.235 6.140 1.00 0.01 O
TER
ATOM 2 P A A2023 -90.980 -77.735 0.198 1.00 0.01 P
ATOM 3 OP1 A A2023 -92.015 -77.815 1.230 1.00 0.01 O
ATOM 4 OP2 A A2023 -91.362 -77.245 -1.129 1.00 0.01 O
ATOM 5 O5' A A2023 -89.744 -76.915 0.732 1.00 0.01 O
ATOM 6 C5' A A2023 -89.381 -76.935 2.103 1.00 0.01 C
ATOM 7 C4' A A2023 -88.165 -76.085 2.352 1.00 0.01 C
ATOM 8 O4' A A2023 -88.135 -75.660 3.740 1.00 0.01 O
ATOM 9 C3' A A2023 -86.823 -76.753 2.079 1.00 0.01 C
ATOM 10 O3' A A2023 -85.984 -75.853 1.355 1.00 0.01 O
ATOM 11 C2' A A2023 -86.270 -76.964 3.491 1.00 0.01 C
ATOM 12 O2' A A2023 -84.881 -76.985 3.583 1.00 0.01 O
ATOM 13 C1' A A2023 -86.828 -75.774 4.211 1.00 0.01 C
ATOM 14 N9 A A2023 -86.840 -75.890 5.677 1.00 0.01 N
ATOM 15 C8 A A2023 -87.414 -76.826 6.477 1.00 0.01 C
ATOM 16 N7 A A2023 -87.246 -76.606 7.754 1.00 0.01 N
ATOM 17 C5 A A2023 -86.495 -75.457 7.846 1.00 0.01 C
ATOM 18 C6 A A2023 -85.962 -74.713 8.942 1.00 0.01 C
ATOM 19 N6 A A2023 -86.072 -74.961 10.268 1.00 0.01 N
ATOM 20 N1 A A2023 -85.268 -73.610 8.599 1.00 0.01 N
ATOM 21 C2 A A2023 -85.101 -73.302 7.309 1.00 0.01 C
ATOM 22 N3 A A2023 -85.530 -73.927 6.226 1.00 0.01 N
ATOM 23 C4 A A2023 -86.239 -75.013 6.560 1.00 0.01 C
ATOM 24 P A A2024 -85.648 -76.091 -0.205 1.00 0.01 P
ATOM 25 OP1 A A2024 -85.311 -77.486 -0.362 1.00 0.01 O
ATOM 26 OP2 A A2024 -84.662 -75.071 -0.589 1.00 0.01 O
ATOM 27 O5' A A2024 -87.024 -75.806 -0.924 1.00 0.01 O
TER
ATOM 1 O3' C B2491 -89.118 -70.259 5.740 1.00 0.01 O
ATOM 2 P C B2492 -87.862 -69.582 6.430 1.00 0.01 P
ATOM 3 OP1 C B2492 -87.567 -70.354 7.653 1.00 0.01 O
ATOM 4 OP2 C B2492 -88.130 -68.138 6.545 1.00 0.01 O
ATOM 5 O5' C B2492 -86.755 -69.829 5.366 1.00 0.01 O
ATOM 6 C5' C B2492 -86.501 -71.121 4.906 1.00 0.01 C
ATOM 7 C4' C B2492 -85.319 -71.127 4.010 1.00 0.01 C
ATOM 8 O4' C B2492 -85.671 -70.527 2.765 1.00 0.01 O
ATOM 9 C3' C B2492 -84.154 -70.297 4.476 1.00 0.01 C
ATOM 10 O3' C B2492 -83.378 -70.954 5.444 1.00 0.01 O
ATOM 11 C2' C B2492 -83.421 -70.034 3.184 1.00 0.01 C
ATOM 12 O2' C B2492 -82.695 -71.179 2.783 1.00 0.01 O
ATOM 13 C1' C B2492 -84.572 -69.865 2.228 1.00 0.01 C
ATOM 14 N1 C B2492 -84.940 -68.483 2.022 1.00 0.01 N
ATOM 15 C2 C B2492 -84.203 -67.847 1.050 1.00 0.01 C
ATOM 16 O2 C B2492 -83.273 -68.501 0.534 1.00 0.01 O
ATOM 17 N3 C B2492 -84.541 -66.567 0.737 1.00 0.01 N
ATOM 18 C4 C B2492 -85.543 -65.959 1.348 1.00 0.01 C
ATOM 19 N4 C B2492 -85.776 -64.709 0.991 1.00 0.01 N
ATOM 20 C5 C B2492 -86.309 -66.608 2.346 1.00 0.01 C
ATOM 21 C6 C B2492 -85.989 -67.871 2.639 1.00 0.01 C
ATOM 22 P U B2493 -82.916 -70.174 6.726 1.00 0.01 P
ATOM 23 OP1 U B2493 -82.316 -71.137 7.619 1.00 0.01 O
ATOM 24 OP2 U B2493 -84.041 -69.407 7.196 1.00 0.01 O
ATOM 25 O5' U B2493 -81.807 -69.235 6.140 1.00 0.01 O
TER
Atoms:
OP1: (-92.015,-77.815,1.230)
OP2: (-91.362,-77.245,-1.129)
C3': (-86.823,-76.753,2.079)
C1': (-86.828,-75.774,4.211)
C5': (-89.381,-76.935,2.103)
O4': (-88.135,-75.660,3.740)
C8: (-87.414,-76.826,6.477)
O2': (-84.881,-76.985,3.583)
C6: (-85.962,-74.713,8.942)
C5: (-86.495,-75.457,7.846)
C4: (-86.239,-75.013,6.560)
P: (-90.980,-77.735,0.198)
C4': (-88.165,-76.085,2.352)
C2': (-86.270,-76.964,3.491)
C2: (-85.101,-73.302,7.309)
N1: (-85.268,-73.610,8.599)
N3: (-85.530,-73.927,6.226)
N6: (-86.072,-74.961,10.268)
N7: (-87.246,-76.606,7.754)
N9: (-86.840,-75.890,5.677)
O5': (-89.744,-76.915,0.732)
O3': (-85.984,-75.853,1.355)
OP2: (-91.362,-77.245,-1.129)
C3': (-86.823,-76.753,2.079)
C1': (-86.828,-75.774,4.211)
C5': (-89.381,-76.935,2.103)
O4': (-88.135,-75.660,3.740)
C8: (-87.414,-76.826,6.477)
O2': (-84.881,-76.985,3.583)
C6: (-85.962,-74.713,8.942)
C5: (-86.495,-75.457,7.846)
C4: (-86.239,-75.013,6.560)
P: (-90.980,-77.735,0.198)
C4': (-88.165,-76.085,2.352)
C2': (-86.270,-76.964,3.491)
C2: (-85.101,-73.302,7.309)
N1: (-85.268,-73.610,8.599)
N3: (-85.530,-73.927,6.226)
N6: (-86.072,-74.961,10.268)
N7: (-87.246,-76.606,7.754)
N9: (-86.840,-75.890,5.677)
O5': (-89.744,-76.915,0.732)
O3': (-85.984,-75.853,1.355)
C2: (-84.203,-67.847,1.050)
OP1: (-87.567,-70.354,7.653)
OP2: (-88.130,-68.138,6.545)
C4: (-85.543,-65.959,1.348)
O5': (-86.755,-69.829,5.366)
C3': (-84.154,-70.297,4.476)
C1': (-84.572,-69.865,2.228)
O4': (-85.671,-70.527,2.765)
C5': (-86.501,-71.121,4.906)
P: (-87.862,-69.582,6.430)
O2: (-83.273,-68.501,0.534)
C4': (-85.319,-71.127,4.010)
C2': (-83.421,-70.034,3.184)
O2': (-82.695,-71.179,2.783)
N1: (-84.940,-68.483,2.022)
N3: (-84.541,-66.567,0.737)
N4: (-85.776,-64.709,0.991)
C6: (-85.989,-67.871,2.639)
C5: (-86.309,-66.608,2.346)
O3': (-83.378,-70.954,5.444)
OP1: (-87.567,-70.354,7.653)
OP2: (-88.130,-68.138,6.545)
C4: (-85.543,-65.959,1.348)
O5': (-86.755,-69.829,5.366)
C3': (-84.154,-70.297,4.476)
C1': (-84.572,-69.865,2.228)
O4': (-85.671,-70.527,2.765)
C5': (-86.501,-71.121,4.906)
P: (-87.862,-69.582,6.430)
O2: (-83.273,-68.501,0.534)
C4': (-85.319,-71.127,4.010)
C2': (-83.421,-70.034,3.184)
O2': (-82.695,-71.179,2.783)
N1: (-84.940,-68.483,2.022)
N3: (-84.541,-66.567,0.737)
N4: (-85.776,-64.709,0.991)
C6: (-85.989,-67.871,2.639)
C5: (-86.309,-66.608,2.346)
O3': (-83.378,-70.954,5.444)
Image (generated by PyMOL):