Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1314:1268
Extra
PDB:
ATOM 1 O3' U A 313 51.032 -51.691 127.340 1.00 56.24 O
ATOM 2 P A A 314 50.923 -50.395 128.262 1.00 51.28 P
ATOM 3 OP1 A A 314 52.275 -49.737 128.311 1.00 51.28 O
ATOM 4 OP2 A A 314 50.303 -50.837 129.480 1.00 51.80 O
ATOM 5 O5' A A 314 49.920 -49.496 127.443 1.00 50.65 O
ATOM 6 C5' A A 314 50.225 -49.146 126.106 1.00 50.09 C
ATOM 7 C4' A A 314 49.146 -48.319 125.518 1.00 49.58 C
ATOM 8 O4' A A 314 48.117 -49.188 124.985 1.00 49.49 O
ATOM 9 C3' A A 314 48.427 -47.406 126.497 1.00 49.67 C
ATOM 10 O3' A A 314 49.059 -46.134 126.625 1.00 49.49 O
ATOM 11 C2' A A 314 47.035 -47.308 125.909 1.00 49.32 C
ATOM 12 O2' A A 314 47.049 -46.344 124.877 1.00 48.72 O
ATOM 13 C1' A A 314 46.851 -48.685 125.283 1.00 49.38 C
ATOM 14 N9 A A 314 46.185 -49.659 126.175 1.00 49.89 N
ATOM 15 C8 A A 314 46.799 -50.702 126.776 1.00 50.41 C
ATOM 16 N7 A A 314 46.022 -51.501 127.446 1.00 50.80 N
ATOM 17 C5 A A 314 44.811 -50.954 127.258 1.00 50.51 C
ATOM 18 C6 A A 314 43.593 -51.335 127.722 1.00 50.70 C
ATOM 19 N6 A A 314 43.417 -52.397 128.488 1.00 51.24 N
ATOM 20 N1 A A 314 42.530 -50.592 127.364 1.00 50.31 N
ATOM 21 C2 A A 314 42.677 -49.538 126.570 1.00 49.77 C
ATOM 22 N3 A A 314 43.813 -49.089 126.091 1.00 49.56 N
ATOM 23 C4 A A 314 44.860 -49.847 126.479 1.00 49.95 C
ATOM 24 P A A 315 48.645 -45.171 127.836 1.00 50.35 P
ATOM 25 OP1 A A 315 49.268 -43.832 127.631 1.00 50.05 O
ATOM 26 OP2 A A 315 48.949 -45.927 129.111 1.00 51.04 O
ATOM 27 O5' A A 315 47.096 -45.048 127.647 1.00 50.13 O
TER
ATOM 1 O3' U B 267 39.649 -44.453 125.184 1.00 50.39 O
ATOM 2 P C B 268 39.362 -44.684 123.654 1.00 56.90 P
ATOM 3 OP1 C B 268 40.469 -44.034 122.894 1.00 56.54 O
ATOM 4 OP2 C B 268 37.938 -44.241 123.383 1.00 56.66 O
ATOM 5 O5' C B 268 39.461 -46.275 123.545 1.00 57.19 O
ATOM 6 C5' C B 268 40.697 -46.925 123.336 1.00 57.32 C
ATOM 7 C4' C B 268 40.591 -48.395 123.592 1.00 57.73 C
ATOM 8 O4' C B 268 39.767 -48.631 124.750 1.00 58.16 O
ATOM 9 C3' C B 268 39.904 -49.212 122.528 1.00 57.52 C
ATOM 10 O3' C B 268 40.695 -49.412 121.375 1.00 57.21 O
ATOM 11 C2' C B 268 39.565 -50.484 123.287 1.00 58.07 C
ATOM 12 O2' C B 268 40.715 -51.313 123.471 1.00 58.39 O
ATOM 13 C1' C B 268 39.187 -49.913 124.649 1.00 58.40 C
ATOM 14 N1 C B 268 37.737 -49.802 124.827 1.00 58.38 N
ATOM 15 C2 C B 268 36.994 -50.986 124.800 1.00 58.63 C
ATOM 16 O2 C B 268 37.524 -52.083 124.626 1.00 58.85 O
ATOM 17 N3 C B 268 35.677 -50.944 124.977 1.00 58.64 N
ATOM 18 C4 C B 268 35.093 -49.781 125.193 1.00 58.42 C
ATOM 19 N4 C B 268 33.772 -49.847 125.364 1.00 58.47 N
ATOM 20 C5 C B 268 35.812 -48.545 125.223 1.00 58.17 C
ATOM 21 C6 C B 268 37.132 -48.600 125.044 1.00 58.16 C
ATOM 22 P G B 269 40.211 -48.817 119.950 1.00 56.26 P
ATOM 23 OP1 G B 269 41.319 -49.018 118.985 1.00 56.04 O
ATOM 24 OP2 G B 269 39.738 -47.444 120.191 1.00 56.01 O
ATOM 25 O5' G B 269 38.964 -49.779 119.582 1.00 56.32 O
TER
ATOM 2 P A A 314 50.923 -50.395 128.262 1.00 51.28 P
ATOM 3 OP1 A A 314 52.275 -49.737 128.311 1.00 51.28 O
ATOM 4 OP2 A A 314 50.303 -50.837 129.480 1.00 51.80 O
ATOM 5 O5' A A 314 49.920 -49.496 127.443 1.00 50.65 O
ATOM 6 C5' A A 314 50.225 -49.146 126.106 1.00 50.09 C
ATOM 7 C4' A A 314 49.146 -48.319 125.518 1.00 49.58 C
ATOM 8 O4' A A 314 48.117 -49.188 124.985 1.00 49.49 O
ATOM 9 C3' A A 314 48.427 -47.406 126.497 1.00 49.67 C
ATOM 10 O3' A A 314 49.059 -46.134 126.625 1.00 49.49 O
ATOM 11 C2' A A 314 47.035 -47.308 125.909 1.00 49.32 C
ATOM 12 O2' A A 314 47.049 -46.344 124.877 1.00 48.72 O
ATOM 13 C1' A A 314 46.851 -48.685 125.283 1.00 49.38 C
ATOM 14 N9 A A 314 46.185 -49.659 126.175 1.00 49.89 N
ATOM 15 C8 A A 314 46.799 -50.702 126.776 1.00 50.41 C
ATOM 16 N7 A A 314 46.022 -51.501 127.446 1.00 50.80 N
ATOM 17 C5 A A 314 44.811 -50.954 127.258 1.00 50.51 C
ATOM 18 C6 A A 314 43.593 -51.335 127.722 1.00 50.70 C
ATOM 19 N6 A A 314 43.417 -52.397 128.488 1.00 51.24 N
ATOM 20 N1 A A 314 42.530 -50.592 127.364 1.00 50.31 N
ATOM 21 C2 A A 314 42.677 -49.538 126.570 1.00 49.77 C
ATOM 22 N3 A A 314 43.813 -49.089 126.091 1.00 49.56 N
ATOM 23 C4 A A 314 44.860 -49.847 126.479 1.00 49.95 C
ATOM 24 P A A 315 48.645 -45.171 127.836 1.00 50.35 P
ATOM 25 OP1 A A 315 49.268 -43.832 127.631 1.00 50.05 O
ATOM 26 OP2 A A 315 48.949 -45.927 129.111 1.00 51.04 O
ATOM 27 O5' A A 315 47.096 -45.048 127.647 1.00 50.13 O
TER
ATOM 1 O3' U B 267 39.649 -44.453 125.184 1.00 50.39 O
ATOM 2 P C B 268 39.362 -44.684 123.654 1.00 56.90 P
ATOM 3 OP1 C B 268 40.469 -44.034 122.894 1.00 56.54 O
ATOM 4 OP2 C B 268 37.938 -44.241 123.383 1.00 56.66 O
ATOM 5 O5' C B 268 39.461 -46.275 123.545 1.00 57.19 O
ATOM 6 C5' C B 268 40.697 -46.925 123.336 1.00 57.32 C
ATOM 7 C4' C B 268 40.591 -48.395 123.592 1.00 57.73 C
ATOM 8 O4' C B 268 39.767 -48.631 124.750 1.00 58.16 O
ATOM 9 C3' C B 268 39.904 -49.212 122.528 1.00 57.52 C
ATOM 10 O3' C B 268 40.695 -49.412 121.375 1.00 57.21 O
ATOM 11 C2' C B 268 39.565 -50.484 123.287 1.00 58.07 C
ATOM 12 O2' C B 268 40.715 -51.313 123.471 1.00 58.39 O
ATOM 13 C1' C B 268 39.187 -49.913 124.649 1.00 58.40 C
ATOM 14 N1 C B 268 37.737 -49.802 124.827 1.00 58.38 N
ATOM 15 C2 C B 268 36.994 -50.986 124.800 1.00 58.63 C
ATOM 16 O2 C B 268 37.524 -52.083 124.626 1.00 58.85 O
ATOM 17 N3 C B 268 35.677 -50.944 124.977 1.00 58.64 N
ATOM 18 C4 C B 268 35.093 -49.781 125.193 1.00 58.42 C
ATOM 19 N4 C B 268 33.772 -49.847 125.364 1.00 58.47 N
ATOM 20 C5 C B 268 35.812 -48.545 125.223 1.00 58.17 C
ATOM 21 C6 C B 268 37.132 -48.600 125.044 1.00 58.16 C
ATOM 22 P G B 269 40.211 -48.817 119.950 1.00 56.26 P
ATOM 23 OP1 G B 269 41.319 -49.018 118.985 1.00 56.04 O
ATOM 24 OP2 G B 269 39.738 -47.444 120.191 1.00 56.01 O
ATOM 25 O5' G B 269 38.964 -49.779 119.582 1.00 56.32 O
TER
Atoms:
OP1: (52.275,-49.737,128.311)
OP2: (50.303,-50.837,129.480)
C3': (48.427,-47.406,126.497)
C1': (46.851,-48.685,125.283)
C5': (50.225,-49.146,126.106)
O4': (48.117,-49.188,124.985)
C8: (46.799,-50.702,126.776)
O2': (47.049,-46.344,124.877)
C6: (43.593,-51.335,127.722)
C5: (44.811,-50.954,127.258)
C4: (44.860,-49.847,126.479)
P: (50.923,-50.395,128.262)
C4': (49.146,-48.319,125.518)
C2': (47.035,-47.308,125.909)
C2: (42.677,-49.538,126.570)
N1: (42.530,-50.592,127.364)
N3: (43.813,-49.089,126.091)
N6: (43.417,-52.397,128.488)
N7: (46.022,-51.501,127.446)
N9: (46.185,-49.659,126.175)
O5': (49.920,-49.496,127.443)
O3': (49.059,-46.134,126.625)
OP2: (50.303,-50.837,129.480)
C3': (48.427,-47.406,126.497)
C1': (46.851,-48.685,125.283)
C5': (50.225,-49.146,126.106)
O4': (48.117,-49.188,124.985)
C8: (46.799,-50.702,126.776)
O2': (47.049,-46.344,124.877)
C6: (43.593,-51.335,127.722)
C5: (44.811,-50.954,127.258)
C4: (44.860,-49.847,126.479)
P: (50.923,-50.395,128.262)
C4': (49.146,-48.319,125.518)
C2': (47.035,-47.308,125.909)
C2: (42.677,-49.538,126.570)
N1: (42.530,-50.592,127.364)
N3: (43.813,-49.089,126.091)
N6: (43.417,-52.397,128.488)
N7: (46.022,-51.501,127.446)
N9: (46.185,-49.659,126.175)
O5': (49.920,-49.496,127.443)
O3': (49.059,-46.134,126.625)
C2: (36.994,-50.986,124.800)
OP1: (40.469,-44.034,122.894)
OP2: (37.938,-44.241,123.383)
C4: (35.093,-49.781,125.193)
O5': (39.461,-46.275,123.545)
C3': (39.904,-49.212,122.528)
C1': (39.187,-49.913,124.649)
O4': (39.767,-48.631,124.750)
C5': (40.697,-46.925,123.336)
P: (39.362,-44.684,123.654)
O2: (37.524,-52.083,124.626)
C4': (40.591,-48.395,123.592)
C2': (39.565,-50.484,123.287)
O2': (40.715,-51.313,123.471)
N1: (37.737,-49.802,124.827)
N3: (35.677,-50.944,124.977)
N4: (33.772,-49.847,125.364)
C6: (37.132,-48.600,125.044)
C5: (35.812,-48.545,125.223)
O3': (40.695,-49.412,121.375)
OP1: (40.469,-44.034,122.894)
OP2: (37.938,-44.241,123.383)
C4: (35.093,-49.781,125.193)
O5': (39.461,-46.275,123.545)
C3': (39.904,-49.212,122.528)
C1': (39.187,-49.913,124.649)
O4': (39.767,-48.631,124.750)
C5': (40.697,-46.925,123.336)
P: (39.362,-44.684,123.654)
O2: (37.524,-52.083,124.626)
C4': (40.591,-48.395,123.592)
C2': (39.565,-50.484,123.287)
O2': (40.715,-51.313,123.471)
N1: (37.737,-49.802,124.827)
N3: (35.677,-50.944,124.977)
N4: (33.772,-49.847,125.364)
C6: (37.132,-48.600,125.044)
C5: (35.812,-48.545,125.223)
O3': (40.695,-49.412,121.375)
Image (generated by PyMOL):