ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A197:A165

Extra

PDB:
ATOM 1 O3' G A 196 53.803 -64.718 -76.404 1.00 70.16 O
ATOM 2 P A A 197 54.433 -63.924 -77.671 1.00 66.88 P
ATOM 3 OP1 A A 197 53.351 -63.358 -78.536 1.00 71.99 O
ATOM 4 OP2 A A 197 55.440 -64.834 -78.262 1.00 47.45 O
ATOM 5 O5' A A 197 55.276 -62.720 -77.047 1.00 58.33 O
ATOM 6 C5' A A 197 56.493 -62.960 -76.363 1.00 55.90 C
ATOM 7 C4' A A 197 56.614 -61.990 -75.227 1.00 55.22 C
ATOM 8 O4' A A 197 57.443 -62.536 -74.169 1.00 54.50 O
ATOM 9 C3' A A 197 57.216 -60.626 -75.523 1.00 54.25 C
ATOM 10 O3' A A 197 56.288 -59.729 -76.094 1.00 58.64 O
ATOM 11 C2' A A 197 57.599 -60.160 -74.129 1.00 58.00 C
ATOM 12 O2' A A 197 56.456 -59.667 -73.444 1.00 56.90 O
ATOM 13 C1' A A 197 58.083 -61.468 -73.488 1.00 60.53 C
ATOM 14 N9 A A 197 59.539 -61.661 -73.559 1.00 58.37 N
ATOM 15 C8 A A 197 60.257 -62.460 -74.424 1.00 57.17 C
ATOM 16 N7 A A 197 61.556 -62.434 -74.218 1.00 58.97 N
ATOM 17 C5 A A 197 61.708 -61.555 -73.149 1.00 58.44 C
ATOM 18 C6 A A 197 62.853 -61.098 -72.439 1.00 58.83 C
ATOM 19 N6 A A 197 64.108 -61.495 -72.691 1.00 58.48 N
ATOM 20 N1 A A 197 62.650 -60.206 -71.442 1.00 57.92 N
ATOM 21 C2 A A 197 61.395 -59.819 -71.170 1.00 58.97 C
ATOM 22 N3 A A 197 60.249 -60.184 -71.749 1.00 55.34 N
ATOM 23 C4 A A 197 60.474 -61.062 -72.742 1.00 56.16 C
ATOM 24 P G A 198 56.817 -58.482 -76.954 1.00 55.75 P
ATOM 25 OP1 G A 198 55.625 -57.701 -77.377 1.00 59.87 O
ATOM 26 OP2 G A 198 57.735 -59.041 -77.981 1.00 60.02 O
ATOM 27 O5' G A 198 57.634 -57.580 -75.926 1.00 53.16 O
TER

ATOM 1 O3' C B 164 64.238 -61.020 -66.580 1.00 58.10 O
ATOM 2 P C B 165 64.974 -59.609 -66.353 1.00 58.66 P
ATOM 3 OP1 C B 165 66.364 -59.732 -66.844 1.00 59.26 O
ATOM 4 OP2 C B 165 64.729 -59.163 -64.957 1.00 54.97 O
ATOM 5 O5' C B 165 64.190 -58.628 -67.324 1.00 53.01 O
ATOM 6 C5' C B 165 64.090 -58.920 -68.708 1.00 55.19 C
ATOM 7 C4' C B 165 63.251 -57.882 -69.382 1.00 53.70 C
ATOM 8 O4' C B 165 61.900 -57.954 -68.872 1.00 51.77 O
ATOM 9 C3' C B 165 63.651 -56.448 -69.101 1.00 52.83 C
ATOM 10 O3' C B 165 64.721 -56.046 -69.926 1.00 50.99 O
ATOM 11 C2' C B 165 62.375 -55.690 -69.421 1.00 49.70 C
ATOM 12 O2' C B 165 62.246 -55.524 -70.818 1.00 49.20 O
ATOM 13 C1' C B 165 61.306 -56.674 -68.952 1.00 46.91 C
ATOM 14 N1 C B 165 60.660 -56.344 -67.666 1.00 44.78 N
ATOM 15 C2 C B 165 59.718 -55.301 -67.633 1.00 51.09 C
ATOM 16 O2 C B 165 59.497 -54.653 -68.662 1.00 54.23 O
ATOM 17 N3 C B 165 59.076 -55.029 -66.487 1.00 49.12 N
ATOM 18 C4 C B 165 59.335 -55.743 -65.399 1.00 47.31 C
ATOM 19 N4 C B 165 58.649 -55.464 -64.300 1.00 52.72 N
ATOM 20 C5 C B 165 60.305 -56.783 -65.394 1.00 44.15 C
ATOM 21 C6 C B 165 60.941 -57.045 -66.536 1.00 44.07 C
ATOM 22 P U B 166 65.937 -55.222 -69.290 1.00 54.94 P
ATOM 23 OP1 U B 166 67.169 -55.616 -70.037 1.00 51.55 O
ATOM 24 OP2 U B 166 65.864 -55.386 -67.802 1.00 49.05 O
ATOM 25 O5' U B 166 65.590 -53.712 -69.634 1.00 48.97 O
TER

Atoms:
OP1: (53.351,-63.358,-78.536)
OP2: (55.440,-64.834,-78.262)
C3': (57.216,-60.626,-75.523)
C1': (58.083,-61.468,-73.488)
C5': (56.493,-62.960,-76.363)
O4': (57.443,-62.536,-74.169)
C8: (60.257,-62.460,-74.424)
O2': (56.456,-59.667,-73.444)
C6: (62.853,-61.098,-72.439)
C5: (61.708,-61.555,-73.149)
C4: (60.474,-61.062,-72.742)
P: (54.433,-63.924,-77.671)
C4': (56.614,-61.990,-75.227)
C2': (57.599,-60.160,-74.129)
C2: (61.395,-59.819,-71.170)
N1: (62.650,-60.206,-71.442)
N3: (60.249,-60.184,-71.749)
N6: (64.108,-61.495,-72.691)
N7: (61.556,-62.434,-74.218)
N9: (59.539,-61.661,-73.559)
O5': (55.276,-62.720,-77.047)
O3': (56.288,-59.729,-76.094)
C2: (59.718,-55.301,-67.633)
OP1: (66.364,-59.732,-66.844)
OP2: (64.729,-59.163,-64.957)
C4: (59.335,-55.743,-65.399)
O5': (64.190,-58.628,-67.324)
C3': (63.651,-56.448,-69.101)
C1': (61.306,-56.674,-68.952)
O4': (61.900,-57.954,-68.872)
C5': (64.090,-58.920,-68.708)
P: (64.974,-59.609,-66.353)
O2: (59.497,-54.653,-68.662)
C4': (63.251,-57.882,-69.382)
C2': (62.375,-55.690,-69.421)
O2': (62.246,-55.524,-70.818)
N1: (60.660,-56.344,-67.666)
N3: (59.076,-55.029,-66.487)
N4: (58.649,-55.464,-64.300)
C6: (60.941,-57.045,-66.536)
C5: (60.305,-56.783,-65.394)
O3': (64.721,-56.046,-69.926)
Image (generated by PyMOL):
PyMOL image
show in jmol