ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1943:A1972

Extra

PDB:
ATOM 1 O3' U A1942 92.999 125.162 118.079 1.00 38.71 O
ATOM 2 P A A1943 94.426 125.749 117.626 1.00 40.95 P
ATOM 3 OP1 A A1943 94.826 124.973 116.428 1.00 40.36 O
ATOM 4 OP2 A A1943 95.352 125.836 118.778 1.00 41.74 O
ATOM 5 O5' A A1943 94.089 127.241 117.201 1.00 41.33 O
ATOM 6 C5' A A1943 93.068 127.537 116.245 1.00 38.94 C
ATOM 7 C4' A A1943 93.081 129.009 115.956 1.00 37.57 C
ATOM 8 O4' A A1943 92.644 129.723 117.134 1.00 35.66 O
ATOM 9 C3' A A1943 94.446 129.595 115.623 1.00 36.45 C
ATOM 10 O3' A A1943 94.734 129.460 114.244 1.00 36.79 O
ATOM 11 C2' A A1943 94.273 131.052 116.012 1.00 36.30 C
ATOM 12 O2' A A1943 93.674 131.823 114.997 1.00 39.20 O
ATOM 13 C1' A A1943 93.334 130.946 117.213 1.00 35.95 C
ATOM 14 N9 A A1943 94.107 130.960 118.443 1.00 35.78 N
ATOM 15 C8 A A1943 94.177 130.059 119.469 1.00 35.99 C
ATOM 16 N7 A A1943 94.984 130.425 120.428 1.00 35.85 N
ATOM 17 C5 A A1943 95.480 131.646 119.999 1.00 35.81 C
ATOM 18 C6 A A1943 96.386 132.553 120.564 1.00 36.01 C
ATOM 19 N6 A A1943 96.988 132.373 121.737 1.00 37.99 N
ATOM 20 N1 A A1943 96.666 133.669 119.871 1.00 35.55 N
ATOM 21 C2 A A1943 96.079 133.853 118.686 1.00 37.46 C
ATOM 22 N3 A A1943 95.218 133.076 118.051 1.00 37.95 N
ATOM 23 C4 A A1943 94.956 131.978 118.776 1.00 36.31 C
ATOM 24 P G A1944 96.238 129.212 113.752 1.00 37.93 P
ATOM 25 OP1 G A1944 96.266 129.421 112.296 1.00 38.41 O
ATOM 26 OP2 G A1944 96.699 127.917 114.315 1.00 39.00 O
ATOM 27 O5' G A1944 97.054 130.433 114.342 1.00 38.95 O
TER

ATOM 1 O3' G B1971 92.808 135.027 111.799 1.00 42.06 O
ATOM 2 P C B1972 92.381 136.313 112.653 1.00 43.78 P
ATOM 3 OP1 C B1972 91.208 135.954 113.469 1.00 45.20 O
ATOM 4 OP2 C B1972 92.266 137.416 111.647 1.00 42.06 O
ATOM 5 O5' C B1972 93.621 136.532 113.631 1.00 43.80 O
ATOM 6 C5' C B1972 94.065 135.467 114.492 1.00 42.95 C
ATOM 7 C4' C B1972 95.359 135.840 115.203 1.00 43.60 C
ATOM 8 O4' C B1972 96.463 135.922 114.269 1.00 44.18 O
ATOM 9 C3' C B1972 95.390 137.161 115.945 1.00 42.78 C
ATOM 10 O3' C B1972 94.776 137.082 117.222 1.00 42.95 O
ATOM 11 C2' C B1972 96.881 137.476 116.029 1.00 42.21 C
ATOM 12 O2' C B1972 97.569 136.895 117.124 1.00 41.24 O
ATOM 13 C1' C B1972 97.404 136.866 114.731 1.00 43.68 C
ATOM 14 N1 C B1972 97.575 137.907 113.717 1.00 45.28 N
ATOM 15 C2 C B1972 98.688 138.728 113.807 1.00 45.75 C
ATOM 16 O2 C B1972 99.508 138.511 114.701 1.00 46.22 O
ATOM 17 N3 C B1972 98.842 139.731 112.921 1.00 47.07 N
ATOM 18 C4 C B1972 97.928 139.917 111.965 1.00 47.89 C
ATOM 19 N4 C B1972 98.114 140.923 111.120 1.00 48.64 N
ATOM 20 C5 C B1972 96.787 139.077 111.836 1.00 47.80 C
ATOM 21 C6 C B1972 96.655 138.091 112.719 1.00 47.35 C
ATOM 22 P U B1973 94.231 138.425 117.899 1.00 44.62 P
ATOM 23 OP1 U B1973 93.334 138.074 119.021 1.00 43.63 O
ATOM 24 OP2 U B1973 93.732 139.255 116.786 1.00 43.38 O
ATOM 25 O5' U B1973 95.538 139.142 118.471 1.00 46.79 O
TER

Atoms:
OP1: (94.826,124.973,116.428)
OP2: (95.352,125.836,118.778)
C3': (94.446,129.595,115.623)
C1': (93.334,130.946,117.213)
C5': (93.068,127.537,116.245)
O4': (92.644,129.723,117.134)
C8: (94.177,130.059,119.469)
O2': (93.674,131.823,114.997)
C6: (96.386,132.553,120.564)
C5: (95.480,131.646,119.999)
C4: (94.956,131.978,118.776)
P: (94.426,125.749,117.626)
C4': (93.081,129.009,115.956)
C2': (94.273,131.052,116.012)
C2: (96.079,133.853,118.686)
N1: (96.666,133.669,119.871)
N3: (95.218,133.076,118.051)
N6: (96.988,132.373,121.737)
N7: (94.984,130.425,120.428)
N9: (94.107,130.960,118.443)
O5': (94.089,127.241,117.201)
O3': (94.734,129.460,114.244)
C2: (98.688,138.728,113.807)
OP1: (91.208,135.954,113.469)
OP2: (92.266,137.416,111.647)
C4: (97.928,139.917,111.965)
O5': (93.621,136.532,113.631)
C3': (95.390,137.161,115.945)
C1': (97.404,136.866,114.731)
O4': (96.463,135.922,114.269)
C5': (94.065,135.467,114.492)
P: (92.381,136.313,112.653)
O2: (99.508,138.511,114.701)
C4': (95.359,135.840,115.203)
C2': (96.881,137.476,116.029)
O2': (97.569,136.895,117.124)
N1: (97.575,137.907,113.717)
N3: (98.842,139.731,112.921)
N4: (98.114,140.923,111.120)
C6: (96.655,138.091,112.719)
C5: (96.787,139.077,111.836)
O3': (94.776,137.082,117.222)
Image (generated by PyMOL):
PyMOL image
show in jmol