Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:088:072
Extra
PDB:
ATOM 1 O3' G A 87 37.747 160.005 17.970 1.00 76.24 O
ATOM 2 P A A 88 39.052 159.118 18.266 1.00 75.73 P
ATOM 3 OP1 A A 88 40.115 159.507 17.297 1.00 76.30 O
ATOM 4 OP2 A A 88 38.621 157.706 18.346 1.00 76.17 O
ATOM 5 O5' A A 88 39.503 159.580 19.720 1.00 74.09 O
ATOM 6 C5' A A 88 40.322 160.747 19.903 1.00 71.63 C
ATOM 7 C4' A A 88 40.027 161.382 21.236 1.00 70.91 C
ATOM 8 O4' A A 88 38.645 161.839 21.259 1.00 71.94 O
ATOM 9 C3' A A 88 40.117 160.448 22.429 1.00 70.09 C
ATOM 10 O3' A A 88 41.454 160.257 22.872 1.00 68.40 O
ATOM 11 C2' A A 88 39.241 161.160 23.448 1.00 70.79 C
ATOM 12 O2' A A 88 39.889 162.269 24.038 1.00 71.60 O
ATOM 13 C1' A A 88 38.100 161.655 22.557 1.00 71.04 C
ATOM 14 N9 A A 88 37.029 160.665 22.460 1.00 71.23 N
ATOM 15 C8 A A 88 36.742 159.855 21.391 1.00 71.53 C
ATOM 16 N7 A A 88 35.747 159.031 21.603 1.00 73.26 N
ATOM 17 C5 A A 88 35.339 159.322 22.899 1.00 73.09 C
ATOM 18 C6 A A 88 34.321 158.782 23.723 1.00 72.57 C
ATOM 19 N6 A A 88 33.511 157.785 23.347 1.00 70.93 N
ATOM 20 N1 A A 88 34.173 159.304 24.962 1.00 72.01 N
ATOM 21 C2 A A 88 35.002 160.289 25.345 1.00 72.54 C
ATOM 22 N3 A A 88 36.000 160.871 24.669 1.00 72.65 N
ATOM 23 C4 A A 88 36.116 160.337 23.437 1.00 72.57 C
ATOM 24 P A A 89 41.944 158.784 23.283 1.00 67.76 P
ATOM 25 OP1 A A 89 43.351 158.875 23.747 1.00 68.66 O
ATOM 26 OP2 A A 89 41.604 157.859 22.175 1.00 68.74 O
ATOM 27 O5' A A 89 41.020 158.404 24.527 1.00 68.87 O
TER
ATOM 1 O3' G B 71 31.483 158.588 29.608 1.00 57.98 O
ATOM 2 P C B 72 31.916 159.004 31.102 1.00 57.18 P
ATOM 3 OP1 C B 72 31.664 157.829 31.970 1.00 56.89 O
ATOM 4 OP2 C B 72 31.271 160.304 31.426 1.00 56.28 O
ATOM 5 O5' C B 72 33.488 159.238 30.984 1.00 55.91 O
ATOM 6 C5' C B 72 34.320 158.332 30.226 1.00 55.64 C
ATOM 7 C4' C B 72 35.563 159.047 29.742 1.00 56.59 C
ATOM 8 O4' C B 72 35.171 160.184 28.925 1.00 55.62 O
ATOM 9 C3' C B 72 36.426 159.670 30.831 1.00 56.94 C
ATOM 10 O3' C B 72 37.300 158.720 31.435 1.00 59.29 O
ATOM 11 C2' C B 72 37.165 160.764 30.073 1.00 54.36 C
ATOM 12 O2' C B 72 38.230 160.271 29.282 1.00 52.47 O
ATOM 13 C1' C B 72 36.058 161.271 29.151 1.00 53.05 C
ATOM 14 N1 C B 72 35.291 162.393 29.729 1.00 50.23 N
ATOM 15 C2 C B 72 35.903 163.654 29.830 1.00 49.44 C
ATOM 16 O2 C B 72 37.069 163.791 29.431 1.00 49.01 O
ATOM 17 N3 C B 72 35.205 164.689 30.357 1.00 48.35 N
ATOM 18 C4 C B 72 33.947 164.505 30.769 1.00 48.46 C
ATOM 19 N4 C B 72 33.292 165.554 31.278 1.00 47.06 N
ATOM 20 C5 C B 72 33.302 163.237 30.678 1.00 49.53 C
ATOM 21 C6 C B 72 34.004 162.217 30.160 1.00 49.88 C
ATOM 22 P C B 73 37.751 158.916 32.964 1.00 58.48 P
ATOM 23 OP1 C B 73 38.452 157.668 33.331 1.00 58.98 O
ATOM 24 OP2 C B 73 36.577 159.366 33.759 1.00 58.92 O
ATOM 25 O5' C B 73 38.808 160.107 32.914 1.00 59.10 O
TER
ATOM 2 P A A 88 39.052 159.118 18.266 1.00 75.73 P
ATOM 3 OP1 A A 88 40.115 159.507 17.297 1.00 76.30 O
ATOM 4 OP2 A A 88 38.621 157.706 18.346 1.00 76.17 O
ATOM 5 O5' A A 88 39.503 159.580 19.720 1.00 74.09 O
ATOM 6 C5' A A 88 40.322 160.747 19.903 1.00 71.63 C
ATOM 7 C4' A A 88 40.027 161.382 21.236 1.00 70.91 C
ATOM 8 O4' A A 88 38.645 161.839 21.259 1.00 71.94 O
ATOM 9 C3' A A 88 40.117 160.448 22.429 1.00 70.09 C
ATOM 10 O3' A A 88 41.454 160.257 22.872 1.00 68.40 O
ATOM 11 C2' A A 88 39.241 161.160 23.448 1.00 70.79 C
ATOM 12 O2' A A 88 39.889 162.269 24.038 1.00 71.60 O
ATOM 13 C1' A A 88 38.100 161.655 22.557 1.00 71.04 C
ATOM 14 N9 A A 88 37.029 160.665 22.460 1.00 71.23 N
ATOM 15 C8 A A 88 36.742 159.855 21.391 1.00 71.53 C
ATOM 16 N7 A A 88 35.747 159.031 21.603 1.00 73.26 N
ATOM 17 C5 A A 88 35.339 159.322 22.899 1.00 73.09 C
ATOM 18 C6 A A 88 34.321 158.782 23.723 1.00 72.57 C
ATOM 19 N6 A A 88 33.511 157.785 23.347 1.00 70.93 N
ATOM 20 N1 A A 88 34.173 159.304 24.962 1.00 72.01 N
ATOM 21 C2 A A 88 35.002 160.289 25.345 1.00 72.54 C
ATOM 22 N3 A A 88 36.000 160.871 24.669 1.00 72.65 N
ATOM 23 C4 A A 88 36.116 160.337 23.437 1.00 72.57 C
ATOM 24 P A A 89 41.944 158.784 23.283 1.00 67.76 P
ATOM 25 OP1 A A 89 43.351 158.875 23.747 1.00 68.66 O
ATOM 26 OP2 A A 89 41.604 157.859 22.175 1.00 68.74 O
ATOM 27 O5' A A 89 41.020 158.404 24.527 1.00 68.87 O
TER
ATOM 1 O3' G B 71 31.483 158.588 29.608 1.00 57.98 O
ATOM 2 P C B 72 31.916 159.004 31.102 1.00 57.18 P
ATOM 3 OP1 C B 72 31.664 157.829 31.970 1.00 56.89 O
ATOM 4 OP2 C B 72 31.271 160.304 31.426 1.00 56.28 O
ATOM 5 O5' C B 72 33.488 159.238 30.984 1.00 55.91 O
ATOM 6 C5' C B 72 34.320 158.332 30.226 1.00 55.64 C
ATOM 7 C4' C B 72 35.563 159.047 29.742 1.00 56.59 C
ATOM 8 O4' C B 72 35.171 160.184 28.925 1.00 55.62 O
ATOM 9 C3' C B 72 36.426 159.670 30.831 1.00 56.94 C
ATOM 10 O3' C B 72 37.300 158.720 31.435 1.00 59.29 O
ATOM 11 C2' C B 72 37.165 160.764 30.073 1.00 54.36 C
ATOM 12 O2' C B 72 38.230 160.271 29.282 1.00 52.47 O
ATOM 13 C1' C B 72 36.058 161.271 29.151 1.00 53.05 C
ATOM 14 N1 C B 72 35.291 162.393 29.729 1.00 50.23 N
ATOM 15 C2 C B 72 35.903 163.654 29.830 1.00 49.44 C
ATOM 16 O2 C B 72 37.069 163.791 29.431 1.00 49.01 O
ATOM 17 N3 C B 72 35.205 164.689 30.357 1.00 48.35 N
ATOM 18 C4 C B 72 33.947 164.505 30.769 1.00 48.46 C
ATOM 19 N4 C B 72 33.292 165.554 31.278 1.00 47.06 N
ATOM 20 C5 C B 72 33.302 163.237 30.678 1.00 49.53 C
ATOM 21 C6 C B 72 34.004 162.217 30.160 1.00 49.88 C
ATOM 22 P C B 73 37.751 158.916 32.964 1.00 58.48 P
ATOM 23 OP1 C B 73 38.452 157.668 33.331 1.00 58.98 O
ATOM 24 OP2 C B 73 36.577 159.366 33.759 1.00 58.92 O
ATOM 25 O5' C B 73 38.808 160.107 32.914 1.00 59.10 O
TER
Atoms:
OP1: (40.115,159.507,17.297)
OP2: (38.621,157.706,18.346)
C3': (40.117,160.448,22.429)
C1': (38.100,161.655,22.557)
C5': (40.322,160.747,19.903)
O4': (38.645,161.839,21.259)
C8: (36.742,159.855,21.391)
O2': (39.889,162.269,24.038)
C6: (34.321,158.782,23.723)
C5: (35.339,159.322,22.899)
C4: (36.116,160.337,23.437)
P: (39.052,159.118,18.266)
C4': (40.027,161.382,21.236)
C2': (39.241,161.160,23.448)
C2: (35.002,160.289,25.345)
N1: (34.173,159.304,24.962)
N3: (36.000,160.871,24.669)
N6: (33.511,157.785,23.347)
N7: (35.747,159.031,21.603)
N9: (37.029,160.665,22.460)
O5': (39.503,159.580,19.720)
O3': (41.454,160.257,22.872)
OP2: (38.621,157.706,18.346)
C3': (40.117,160.448,22.429)
C1': (38.100,161.655,22.557)
C5': (40.322,160.747,19.903)
O4': (38.645,161.839,21.259)
C8: (36.742,159.855,21.391)
O2': (39.889,162.269,24.038)
C6: (34.321,158.782,23.723)
C5: (35.339,159.322,22.899)
C4: (36.116,160.337,23.437)
P: (39.052,159.118,18.266)
C4': (40.027,161.382,21.236)
C2': (39.241,161.160,23.448)
C2: (35.002,160.289,25.345)
N1: (34.173,159.304,24.962)
N3: (36.000,160.871,24.669)
N6: (33.511,157.785,23.347)
N7: (35.747,159.031,21.603)
N9: (37.029,160.665,22.460)
O5': (39.503,159.580,19.720)
O3': (41.454,160.257,22.872)
C2: (35.903,163.654,29.830)
OP1: (31.664,157.829,31.970)
OP2: (31.271,160.304,31.426)
C4: (33.947,164.505,30.769)
O5': (33.488,159.238,30.984)
C3': (36.426,159.670,30.831)
C1': (36.058,161.271,29.151)
O4': (35.171,160.184,28.925)
C5': (34.320,158.332,30.226)
P: (31.916,159.004,31.102)
O2: (37.069,163.791,29.431)
C4': (35.563,159.047,29.742)
C2': (37.165,160.764,30.073)
O2': (38.230,160.271,29.282)
N1: (35.291,162.393,29.729)
N3: (35.205,164.689,30.357)
N4: (33.292,165.554,31.278)
C6: (34.004,162.217,30.160)
C5: (33.302,163.237,30.678)
O3': (37.300,158.720,31.435)
OP1: (31.664,157.829,31.970)
OP2: (31.271,160.304,31.426)
C4: (33.947,164.505,30.769)
O5': (33.488,159.238,30.984)
C3': (36.426,159.670,30.831)
C1': (36.058,161.271,29.151)
O4': (35.171,160.184,28.925)
C5': (34.320,158.332,30.226)
P: (31.916,159.004,31.102)
O2: (37.069,163.791,29.431)
C4': (35.563,159.047,29.742)
C2': (37.165,160.764,30.073)
O2': (38.230,160.271,29.282)
N1: (35.291,162.393,29.729)
N3: (35.205,164.689,30.357)
N4: (33.292,165.554,31.278)
C6: (34.004,162.217,30.160)
C5: (33.302,163.237,30.678)
O3': (37.300,158.720,31.435)
Image (generated by PyMOL):