Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:X72:X44
Extra
PDB:
ATOM 1 O3' C A 71 11.211 -1.482 17.109 1.00 37.46 O
ATOM 2 P A A 72 12.628 -0.722 17.216 1.00 38.62 P
ATOM 3 OP1 A A 72 12.261 0.497 17.980 1.00 43.72 O
ATOM 4 OP2 A A 72 13.163 -0.595 15.837 1.00 34.56 O
ATOM 5 O5' A A 72 13.598 -1.616 18.094 1.00 31.08 O
ATOM 6 C5' A A 72 13.616 -1.567 19.512 1.00 29.93 C
ATOM 7 C4' A A 72 14.874 -0.899 20.010 1.00 29.42 C
ATOM 8 O4' A A 72 16.035 -1.439 19.320 1.00 25.75 O
ATOM 9 C3' A A 72 14.941 0.606 19.782 1.00 31.28 C
ATOM 10 O3' A A 72 15.681 1.168 20.862 1.00 32.34 O
ATOM 11 C2' A A 72 15.774 0.720 18.503 1.00 28.38 C
ATOM 12 O2' A A 72 16.388 1.982 18.328 1.00 30.94 O
ATOM 13 C1' A A 72 16.788 -0.395 18.737 1.00 27.44 C
ATOM 14 N9 A A 72 17.459 -0.941 17.550 1.00 25.34 N
ATOM 15 C8 A A 72 17.084 -0.876 16.231 1.00 24.42 C
ATOM 16 N7 A A 72 17.917 -1.498 15.427 1.00 22.57 N
ATOM 17 C5 A A 72 18.904 -2.016 16.255 1.00 25.58 C
ATOM 18 C6 A A 72 20.079 -2.772 16.017 1.00 24.22 C
ATOM 19 N6 A A 72 20.500 -3.173 14.810 1.00 27.01 N
ATOM 20 N1 A A 72 20.844 -3.095 17.079 1.00 22.99 N
ATOM 21 C2 A A 72 20.445 -2.708 18.295 1.00 26.87 C
ATOM 22 N3 A A 72 19.378 -1.992 18.647 1.00 24.23 N
ATOM 23 C4 A A 72 18.633 -1.670 17.571 1.00 25.90 C
ATOM 24 P A A 73 15.044 1.350 22.322 1.00 33.20 P
ATOM 25 OP1 A A 73 15.704 0.347 23.197 1.00 34.83 O
ATOM 26 OP2 A A 73 13.567 1.385 22.163 1.00 31.15 O
ATOM 27 O5' A A 73 15.636 2.785 22.682 1.00 31.04 O
TER
ATOM 1 O3' C B 43 25.271 -5.357 15.531 1.00 20.46 O
ATOM 2 P C B 44 26.445 -4.734 16.460 1.00 26.35 P
ATOM 3 OP1 C B 44 27.117 -3.808 15.536 1.00 26.00 O
ATOM 4 OP2 C B 44 27.250 -5.780 17.122 1.00 26.89 O
ATOM 5 O5' C B 44 25.691 -3.918 17.607 1.00 23.40 O
ATOM 6 C5' C B 44 24.803 -2.841 17.367 1.00 22.91 C
ATOM 7 C4' C B 44 24.263 -2.326 18.675 1.00 22.10 C
ATOM 8 O4' C B 44 23.486 -3.370 19.322 1.00 20.26 O
ATOM 9 C3' C B 44 25.327 -1.968 19.706 1.00 22.91 C
ATOM 10 O3' C B 44 25.889 -0.683 19.508 1.00 20.30 O
ATOM 11 C2' C B 44 24.569 -2.093 21.017 1.00 21.08 C
ATOM 12 O2' C B 44 23.738 -0.956 21.212 1.00 22.36 O
ATOM 13 C1' C B 44 23.670 -3.293 20.725 1.00 22.84 C
ATOM 14 N1 C B 44 24.161 -4.595 21.251 1.00 21.38 N
ATOM 15 C2 C B 44 23.941 -4.907 22.594 1.00 22.67 C
ATOM 16 O2 C B 44 23.391 -4.080 23.322 1.00 22.02 O
ATOM 17 N3 C B 44 24.343 -6.107 23.072 1.00 23.43 N
ATOM 18 C4 C B 44 24.945 -6.985 22.267 1.00 23.98 C
ATOM 19 N4 C B 44 25.333 -8.157 22.794 1.00 23.29 N
ATOM 20 C5 C B 44 25.166 -6.699 20.888 1.00 22.74 C
ATOM 21 C6 C B 44 24.761 -5.506 20.435 1.00 23.28 C
ATOM 22 P A B 45 27.410 -0.370 19.895 1.00 23.90 P
ATOM 23 OP1 A B 45 27.656 0.898 19.176 1.00 25.96 O
ATOM 24 OP2 A B 45 28.206 -1.584 19.558 1.00 25.39 O
ATOM 25 O5' A B 45 27.420 -0.069 21.456 1.00 20.23 O
TER
ATOM 2 P A A 72 12.628 -0.722 17.216 1.00 38.62 P
ATOM 3 OP1 A A 72 12.261 0.497 17.980 1.00 43.72 O
ATOM 4 OP2 A A 72 13.163 -0.595 15.837 1.00 34.56 O
ATOM 5 O5' A A 72 13.598 -1.616 18.094 1.00 31.08 O
ATOM 6 C5' A A 72 13.616 -1.567 19.512 1.00 29.93 C
ATOM 7 C4' A A 72 14.874 -0.899 20.010 1.00 29.42 C
ATOM 8 O4' A A 72 16.035 -1.439 19.320 1.00 25.75 O
ATOM 9 C3' A A 72 14.941 0.606 19.782 1.00 31.28 C
ATOM 10 O3' A A 72 15.681 1.168 20.862 1.00 32.34 O
ATOM 11 C2' A A 72 15.774 0.720 18.503 1.00 28.38 C
ATOM 12 O2' A A 72 16.388 1.982 18.328 1.00 30.94 O
ATOM 13 C1' A A 72 16.788 -0.395 18.737 1.00 27.44 C
ATOM 14 N9 A A 72 17.459 -0.941 17.550 1.00 25.34 N
ATOM 15 C8 A A 72 17.084 -0.876 16.231 1.00 24.42 C
ATOM 16 N7 A A 72 17.917 -1.498 15.427 1.00 22.57 N
ATOM 17 C5 A A 72 18.904 -2.016 16.255 1.00 25.58 C
ATOM 18 C6 A A 72 20.079 -2.772 16.017 1.00 24.22 C
ATOM 19 N6 A A 72 20.500 -3.173 14.810 1.00 27.01 N
ATOM 20 N1 A A 72 20.844 -3.095 17.079 1.00 22.99 N
ATOM 21 C2 A A 72 20.445 -2.708 18.295 1.00 26.87 C
ATOM 22 N3 A A 72 19.378 -1.992 18.647 1.00 24.23 N
ATOM 23 C4 A A 72 18.633 -1.670 17.571 1.00 25.90 C
ATOM 24 P A A 73 15.044 1.350 22.322 1.00 33.20 P
ATOM 25 OP1 A A 73 15.704 0.347 23.197 1.00 34.83 O
ATOM 26 OP2 A A 73 13.567 1.385 22.163 1.00 31.15 O
ATOM 27 O5' A A 73 15.636 2.785 22.682 1.00 31.04 O
TER
ATOM 1 O3' C B 43 25.271 -5.357 15.531 1.00 20.46 O
ATOM 2 P C B 44 26.445 -4.734 16.460 1.00 26.35 P
ATOM 3 OP1 C B 44 27.117 -3.808 15.536 1.00 26.00 O
ATOM 4 OP2 C B 44 27.250 -5.780 17.122 1.00 26.89 O
ATOM 5 O5' C B 44 25.691 -3.918 17.607 1.00 23.40 O
ATOM 6 C5' C B 44 24.803 -2.841 17.367 1.00 22.91 C
ATOM 7 C4' C B 44 24.263 -2.326 18.675 1.00 22.10 C
ATOM 8 O4' C B 44 23.486 -3.370 19.322 1.00 20.26 O
ATOM 9 C3' C B 44 25.327 -1.968 19.706 1.00 22.91 C
ATOM 10 O3' C B 44 25.889 -0.683 19.508 1.00 20.30 O
ATOM 11 C2' C B 44 24.569 -2.093 21.017 1.00 21.08 C
ATOM 12 O2' C B 44 23.738 -0.956 21.212 1.00 22.36 O
ATOM 13 C1' C B 44 23.670 -3.293 20.725 1.00 22.84 C
ATOM 14 N1 C B 44 24.161 -4.595 21.251 1.00 21.38 N
ATOM 15 C2 C B 44 23.941 -4.907 22.594 1.00 22.67 C
ATOM 16 O2 C B 44 23.391 -4.080 23.322 1.00 22.02 O
ATOM 17 N3 C B 44 24.343 -6.107 23.072 1.00 23.43 N
ATOM 18 C4 C B 44 24.945 -6.985 22.267 1.00 23.98 C
ATOM 19 N4 C B 44 25.333 -8.157 22.794 1.00 23.29 N
ATOM 20 C5 C B 44 25.166 -6.699 20.888 1.00 22.74 C
ATOM 21 C6 C B 44 24.761 -5.506 20.435 1.00 23.28 C
ATOM 22 P A B 45 27.410 -0.370 19.895 1.00 23.90 P
ATOM 23 OP1 A B 45 27.656 0.898 19.176 1.00 25.96 O
ATOM 24 OP2 A B 45 28.206 -1.584 19.558 1.00 25.39 O
ATOM 25 O5' A B 45 27.420 -0.069 21.456 1.00 20.23 O
TER
Atoms:
OP1: (12.261,0.497,17.980)
OP2: (13.163,-0.595,15.837)
C3': (14.941,0.606,19.782)
C1': (16.788,-0.395,18.737)
C5': (13.616,-1.567,19.512)
O4': (16.035,-1.439,19.320)
C8: (17.084,-0.876,16.231)
O2': (16.388,1.982,18.328)
C6: (20.079,-2.772,16.017)
C5: (18.904,-2.016,16.255)
C4: (18.633,-1.670,17.571)
P: (12.628,-0.722,17.216)
C4': (14.874,-0.899,20.010)
C2': (15.774,0.720,18.503)
C2: (20.445,-2.708,18.295)
N1: (20.844,-3.095,17.079)
N3: (19.378,-1.992,18.647)
N6: (20.500,-3.173,14.810)
N7: (17.917,-1.498,15.427)
N9: (17.459,-0.941,17.550)
O5': (13.598,-1.616,18.094)
O3': (15.681,1.168,20.862)
OP2: (13.163,-0.595,15.837)
C3': (14.941,0.606,19.782)
C1': (16.788,-0.395,18.737)
C5': (13.616,-1.567,19.512)
O4': (16.035,-1.439,19.320)
C8: (17.084,-0.876,16.231)
O2': (16.388,1.982,18.328)
C6: (20.079,-2.772,16.017)
C5: (18.904,-2.016,16.255)
C4: (18.633,-1.670,17.571)
P: (12.628,-0.722,17.216)
C4': (14.874,-0.899,20.010)
C2': (15.774,0.720,18.503)
C2: (20.445,-2.708,18.295)
N1: (20.844,-3.095,17.079)
N3: (19.378,-1.992,18.647)
N6: (20.500,-3.173,14.810)
N7: (17.917,-1.498,15.427)
N9: (17.459,-0.941,17.550)
O5': (13.598,-1.616,18.094)
O3': (15.681,1.168,20.862)
C2: (23.941,-4.907,22.594)
OP1: (27.117,-3.808,15.536)
OP2: (27.250,-5.780,17.122)
C4: (24.945,-6.985,22.267)
O5': (25.691,-3.918,17.607)
C3': (25.327,-1.968,19.706)
C1': (23.670,-3.293,20.725)
O4': (23.486,-3.370,19.322)
C5': (24.803,-2.841,17.367)
P: (26.445,-4.734,16.460)
O2: (23.391,-4.080,23.322)
C4': (24.263,-2.326,18.675)
C2': (24.569,-2.093,21.017)
O2': (23.738,-0.956,21.212)
N1: (24.161,-4.595,21.251)
N3: (24.343,-6.107,23.072)
N4: (25.333,-8.157,22.794)
C6: (24.761,-5.506,20.435)
C5: (25.166,-6.699,20.888)
O3': (25.889,-0.683,19.508)
OP1: (27.117,-3.808,15.536)
OP2: (27.250,-5.780,17.122)
C4: (24.945,-6.985,22.267)
O5': (25.691,-3.918,17.607)
C3': (25.327,-1.968,19.706)
C1': (23.670,-3.293,20.725)
O4': (23.486,-3.370,19.322)
C5': (24.803,-2.841,17.367)
P: (26.445,-4.734,16.460)
O2: (23.391,-4.080,23.322)
C4': (24.263,-2.326,18.675)
C2': (24.569,-2.093,21.017)
O2': (23.738,-0.956,21.212)
N1: (24.161,-4.595,21.251)
N3: (24.343,-6.107,23.072)
N4: (25.333,-8.157,22.794)
C6: (24.761,-5.506,20.435)
C5: (25.166,-6.699,20.888)
O3': (25.889,-0.683,19.508)
Image (generated by PyMOL):