ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQF:A253:A223

Extra

PDB:
ATOM 1 O3' A A 252 110.169 60.360 -19.827 1.00 67.54 O
ATOM 2 P A A 253 110.716 60.216 -21.326 1.00 69.40 P
ATOM 3 OP1 A A 253 109.563 59.983 -22.252 1.00 69.78 O
ATOM 4 OP2 A A 253 111.850 59.267 -21.302 1.00 69.63 O
ATOM 5 O5' A A 253 111.264 61.651 -21.638 1.00 68.13 O
ATOM 6 C5' A A 253 110.370 62.770 -21.717 1.00 65.95 C
ATOM 7 C4' A A 253 111.156 64.042 -21.882 1.00 63.81 C
ATOM 8 O4' A A 253 111.788 64.407 -20.631 1.00 63.43 O
ATOM 9 C3' A A 253 112.283 63.959 -22.892 1.00 62.07 C
ATOM 10 O3' A A 253 111.762 64.207 -24.187 1.00 62.23 O
ATOM 11 C2' A A 253 113.235 65.044 -22.408 1.00 61.04 C
ATOM 12 O2' A A 253 112.811 66.315 -22.831 1.00 62.00 O
ATOM 13 C1' A A 253 113.053 64.979 -20.889 1.00 61.31 C
ATOM 14 N9 A A 253 114.067 64.162 -20.224 1.00 60.79 N
ATOM 15 C8 A A 253 114.140 62.795 -20.188 1.00 61.57 C
ATOM 16 N7 A A 253 115.205 62.339 -19.578 1.00 60.03 N
ATOM 17 C5 A A 253 115.867 63.483 -19.173 1.00 57.53 C
ATOM 18 C6 A A 253 117.067 63.673 -18.509 1.00 56.45 C
ATOM 19 N6 A A 253 117.863 62.679 -18.132 1.00 55.79 N
ATOM 20 N1 A A 253 117.444 64.936 -18.245 1.00 57.02 N
ATOM 21 C2 A A 253 116.663 65.934 -18.644 1.00 57.16 C
ATOM 22 N3 A A 253 115.515 65.884 -19.297 1.00 60.18 N
ATOM 23 C4 A A 253 115.167 64.611 -19.538 1.00 59.14 C
ATOM 24 P U A 254 112.596 63.770 -25.487 1.00 64.11 P
ATOM 25 OP1 U A 254 111.631 63.563 -26.607 1.00 62.50 O
ATOM 26 OP2 U A 254 113.512 62.681 -25.083 1.00 64.57 O
ATOM 27 O5' U A 254 113.458 65.068 -25.847 1.00 64.84 O
TER

ATOM 1 O3' G B 222 120.998 67.063 -15.165 1.00 56.52 O
ATOM 2 P C B 223 122.053 68.115 -15.762 1.00 57.74 P
ATOM 3 OP1 C B 223 123.313 67.375 -16.087 1.00 55.49 O
ATOM 4 OP2 C B 223 122.085 69.280 -14.823 1.00 56.30 O
ATOM 5 O5' C B 223 121.385 68.550 -17.126 1.00 55.97 O
ATOM 6 C5' C B 223 121.021 67.566 -18.089 1.00 54.83 C
ATOM 7 C4' C B 223 120.145 68.173 -19.153 1.00 55.36 C
ATOM 8 O4' C B 223 118.831 68.473 -18.616 1.00 55.23 O
ATOM 9 C3' C B 223 120.611 69.493 -19.740 1.00 56.00 C
ATOM 10 O3' C B 223 121.633 69.334 -20.703 1.00 56.47 O
ATOM 11 C2' C B 223 119.317 70.051 -20.317 1.00 55.38 C
ATOM 12 O2' C B 223 118.978 69.430 -21.538 1.00 54.98 O
ATOM 13 C1' C B 223 118.305 69.623 -19.256 1.00 55.33 C
ATOM 14 N1 C B 223 118.113 70.681 -18.246 1.00 55.87 N
ATOM 15 C2 C B 223 117.283 71.758 -18.553 1.00 56.99 C
ATOM 16 O2 C B 223 116.699 71.772 -19.642 1.00 60.19 O
ATOM 17 N3 C B 223 117.131 72.758 -17.657 1.00 56.59 N
ATOM 18 C4 C B 223 117.758 72.702 -16.485 1.00 55.56 C
ATOM 19 N4 C B 223 117.575 73.711 -15.632 1.00 55.37 N
ATOM 20 C5 C B 223 118.598 71.608 -16.133 1.00 56.60 C
ATOM 21 C6 C B 223 118.746 70.628 -17.035 1.00 56.90 C
ATOM 22 P C B 224 122.701 70.517 -20.924 1.00 55.73 P
ATOM 23 OP1 C B 224 123.654 69.993 -21.949 1.00 55.82 O
ATOM 24 OP2 C B 224 123.201 71.023 -19.616 1.00 55.48 O
ATOM 25 O5' C B 224 121.842 71.655 -21.621 1.00 56.41 O
TER

Atoms:
OP1: (109.563,59.983,-22.252)
OP2: (111.850,59.267,-21.302)
C3': (112.283,63.959,-22.892)
C1': (113.053,64.979,-20.889)
C5': (110.370,62.770,-21.717)
O4': (111.788,64.407,-20.631)
C8: (114.140,62.795,-20.188)
O2': (112.811,66.315,-22.831)
C6: (117.067,63.673,-18.509)
C5: (115.867,63.483,-19.173)
C4: (115.167,64.611,-19.538)
P: (110.716,60.216,-21.326)
C4': (111.156,64.042,-21.882)
C2': (113.235,65.044,-22.408)
C2: (116.663,65.934,-18.644)
N1: (117.444,64.936,-18.245)
N3: (115.515,65.884,-19.297)
N6: (117.863,62.679,-18.132)
N7: (115.205,62.339,-19.578)
N9: (114.067,64.162,-20.224)
O5': (111.264,61.651,-21.638)
O3': (111.762,64.207,-24.187)
C2: (117.283,71.758,-18.553)
OP1: (123.313,67.375,-16.087)
OP2: (122.085,69.280,-14.823)
C4: (117.758,72.702,-16.485)
O5': (121.385,68.550,-17.126)
C3': (120.611,69.493,-19.740)
C1': (118.305,69.623,-19.256)
O4': (118.831,68.473,-18.616)
C5': (121.021,67.566,-18.089)
P: (122.053,68.115,-15.762)
O2: (116.699,71.772,-19.642)
C4': (120.145,68.173,-19.153)
C2': (119.317,70.051,-20.317)
O2': (118.978,69.430,-21.538)
N1: (118.113,70.681,-18.246)
N3: (117.131,72.758,-17.657)
N4: (117.575,73.711,-15.632)
C6: (118.746,70.628,-17.035)
C5: (118.598,71.608,-16.133)
O3': (121.633,69.334,-20.703)
Image (generated by PyMOL):
PyMOL image
show in jmol