ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A1251:A1258

Extra

PDB:
ATOM 1 O3' G A1250 -186.469 53.631 -5.408 1.00133.54 O
ATOM 2 P A A1251 -185.750 54.721 -6.346 1.00151.00 P
ATOM 3 OP1 A A1251 -186.822 55.630 -6.821 1.00156.28 O
ATOM 4 OP2 A A1251 -184.887 54.025 -7.338 1.00156.28 O
ATOM 5 O5' A A1251 -184.808 55.532 -5.344 1.00117.74 O
ATOM 6 C5' A A1251 -185.376 56.463 -4.405 1.00117.74 C
ATOM 7 C4' A A1251 -184.295 57.186 -3.628 1.00117.74 C
ATOM 8 O4' A A1251 -183.604 56.266 -2.742 1.00117.74 O
ATOM 9 C3' A A1251 -183.174 57.871 -4.399 1.00117.74 C
ATOM 10 O3' A A1251 -183.540 59.145 -4.920 1.00117.74 O
ATOM 11 C2' A A1251 -182.088 58.012 -3.336 1.00117.74 C
ATOM 12 O2' A A1251 -182.258 59.153 -2.512 1.00117.74 O
ATOM 13 C1' A A1251 -182.288 56.743 -2.505 1.00117.74 C
ATOM 14 N9 A A1251 -181.318 55.700 -2.847 1.00151.28 N
ATOM 15 C8 A A1251 -181.481 54.589 -3.642 1.00151.28 C
ATOM 16 N7 A A1251 -180.397 53.858 -3.757 1.00151.28 N
ATOM 17 C5 A A1251 -179.456 54.529 -2.985 1.00151.28 C
ATOM 18 C6 A A1251 -178.101 54.265 -2.692 1.00151.28 C
ATOM 19 N6 A A1251 -177.434 53.206 -3.160 1.00151.28 N
ATOM 20 N1 A A1251 -177.449 55.137 -1.889 1.00151.28 N
ATOM 21 C2 A A1251 -178.117 56.196 -1.416 1.00151.28 C
ATOM 22 N3 A A1251 -179.386 56.550 -1.615 1.00151.28 N
ATOM 23 C4 A A1251 -180.009 55.665 -2.418 1.00151.28 C
ATOM 24 P G A1252 -182.684 59.785 -6.124 1.00157.15 P
ATOM 25 OP1 G A1252 -183.245 61.133 -6.408 1.00128.02 O
ATOM 26 OP2 G A1252 -182.587 58.781 -7.221 1.00128.02 O
ATOM 27 O5' G A1252 -181.228 59.980 -5.506 1.00159.14 O
TER

ATOM 1 O3' U B1257 -172.298 64.337 -1.070 1.00159.96 O
ATOM 2 P C B1258 -172.576 64.090 0.503 1.00138.32 P
ATOM 3 OP1 C B1258 -173.830 64.815 0.836 1.00188.36 O
ATOM 4 OP2 C B1258 -171.351 64.345 1.304 1.00188.36 O
ATOM 5 O5' C B1258 -172.867 62.523 0.587 1.00105.27 O
ATOM 6 C5' C B1258 -174.204 62.042 0.783 1.00103.36 C
ATOM 7 C4' C B1258 -174.466 60.806 -0.049 1.00101.85 C
ATOM 8 O4' C B1258 -174.169 61.067 -1.450 1.00100.87 O
ATOM 9 C3' C B1258 -173.666 59.556 0.273 1.00101.18 C
ATOM 10 O3' C B1258 -174.191 58.855 1.395 1.00101.02 O
ATOM 11 C2' C B1258 -173.786 58.759 -1.026 1.00101.14 C
ATOM 12 O2' C B1258 -175.020 58.070 -1.158 1.00 99.92 O
ATOM 13 C1' C B1258 -173.723 59.869 -2.077 1.00101.45 C
ATOM 14 N1 C B1258 -172.338 60.062 -2.562 1.00115.24 N
ATOM 15 C2 C B1258 -171.850 59.233 -3.593 1.00115.41 C
ATOM 16 O2 C B1258 -172.611 58.402 -4.114 1.00115.02 O
ATOM 17 N3 C B1258 -170.564 59.365 -3.991 1.00115.56 N
ATOM 18 C4 C B1258 -169.776 60.278 -3.415 1.00115.19 C
ATOM 19 N4 C B1258 -168.504 60.356 -3.818 1.00114.56 N
ATOM 20 C5 C B1258 -170.253 61.151 -2.395 1.00115.13 C
ATOM 21 C6 C B1258 -171.526 61.012 -2.004 1.00115.70 C
ATOM 22 P G B1259 -173.188 58.103 2.404 1.00117.84 P
ATOM 23 OP1 G B1259 -174.000 57.657 3.565 1.00114.43 O
ATOM 24 OP2 G B1259 -172.001 58.971 2.629 1.00113.58 O
ATOM 25 O5' G B1259 -172.721 56.808 1.596 1.00114.90 O
TER

Atoms:
OP1: (-186.822,55.630,-6.821)
OP2: (-184.887,54.025,-7.338)
C3': (-183.174,57.871,-4.399)
C1': (-182.288,56.743,-2.505)
C5': (-185.376,56.463,-4.405)
O4': (-183.604,56.266,-2.742)
C8: (-181.481,54.589,-3.642)
O2': (-182.258,59.153,-2.512)
C6: (-178.101,54.265,-2.692)
C5: (-179.456,54.529,-2.985)
C4: (-180.009,55.665,-2.418)
P: (-185.750,54.721,-6.346)
C4': (-184.295,57.186,-3.628)
C2': (-182.088,58.012,-3.336)
C2: (-178.117,56.196,-1.416)
N1: (-177.449,55.137,-1.889)
N3: (-179.386,56.550,-1.615)
N6: (-177.434,53.206,-3.160)
N7: (-180.397,53.858,-3.757)
N9: (-181.318,55.700,-2.847)
O5': (-184.808,55.532,-5.344)
O3': (-183.540,59.145,-4.920)
C2: (-171.850,59.233,-3.593)
OP1: (-173.830,64.815,0.836)
OP2: (-171.351,64.345,1.304)
C4: (-169.776,60.278,-3.415)
O5': (-172.867,62.523,0.587)
C3': (-173.666,59.556,0.273)
C1': (-173.723,59.869,-2.077)
O4': (-174.169,61.067,-1.450)
C5': (-174.204,62.042,0.783)
P: (-172.576,64.090,0.503)
O2: (-172.611,58.402,-4.114)
C4': (-174.466,60.806,-0.049)
C2': (-173.786,58.759,-1.026)
O2': (-175.020,58.070,-1.158)
N1: (-172.338,60.062,-2.562)
N3: (-170.564,59.365,-3.991)
N4: (-168.504,60.356,-3.818)
C6: (-171.526,61.012,-2.004)
C5: (-170.253,61.151,-2.395)
O3': (-174.191,58.855,1.395)
Image (generated by PyMOL):
PyMOL image
show in jmol