Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A280:A246
Extra
PDB:
ATOM 1 O3' G A 279 -45.352 17.112 -37.837 1.00 36.95 O
ATOM 2 P A A 280 -46.101 16.255 -38.969 1.00 24.45 P
ATOM 3 OP1 A A 280 -46.126 17.081 -40.192 1.00 24.45 O
ATOM 4 OP2 A A 280 -47.399 15.805 -38.394 1.00 24.45 O
ATOM 5 O5' A A 280 -45.120 15.011 -39.177 1.00 24.45 O
ATOM 6 C5' A A 280 -43.971 15.121 -40.000 1.00 24.45 C
ATOM 7 C4' A A 280 -42.709 14.795 -39.244 1.00 24.45 C
ATOM 8 O4' A A 280 -42.757 15.407 -37.932 1.00 24.45 O
ATOM 9 C3' A A 280 -42.462 13.323 -38.947 1.00 24.45 C
ATOM 10 O3' A A 280 -41.934 12.603 -40.050 1.00 24.45 O
ATOM 11 C2' A A 280 -41.532 13.380 -37.748 1.00 24.45 C
ATOM 12 O2' A A 280 -40.203 13.662 -38.146 1.00 24.45 O
ATOM 13 C1' A A 280 -42.085 14.588 -36.997 1.00 24.45 C
ATOM 14 N9 A A 280 -43.041 14.193 -35.947 1.00 25.01 N
ATOM 15 C8 A A 280 -44.295 14.714 -35.723 1.00 25.01 C
ATOM 16 N7 A A 280 -44.932 14.165 -34.712 1.00 25.01 N
ATOM 17 C5 A A 280 -44.034 13.230 -34.240 1.00 25.01 C
ATOM 18 C6 A A 280 -44.124 12.336 -33.183 1.00 25.01 C
ATOM 19 N6 A A 280 -45.199 12.263 -32.403 1.00 25.01 N
ATOM 20 N1 A A 280 -43.073 11.530 -32.955 1.00 25.01 N
ATOM 21 C2 A A 280 -42.010 11.631 -33.756 1.00 25.01 C
ATOM 22 N3 A A 280 -41.812 12.446 -34.785 1.00 25.01 N
ATOM 23 C4 A A 280 -42.872 13.231 -34.979 1.00 25.01 C
ATOM 24 P U A 281 -42.904 11.646 -40.908 1.00 25.03 P
ATOM 25 OP1 U A 281 -42.201 11.320 -42.170 1.00 25.03 O
ATOM 26 OP2 U A 281 -44.225 12.339 -40.991 1.00 25.03 O
ATOM 27 O5' U A 281 -43.041 10.331 -39.985 1.00 25.03 O
TER
ATOM 1 O3' G B 245 -41.618 7.685 -29.406 1.00 35.28 O
ATOM 2 P C B 246 -40.511 6.615 -29.900 1.00 37.30 P
ATOM 3 OP1 C B 246 -41.191 5.314 -30.054 1.00 37.30 O
ATOM 4 OP2 C B 246 -39.358 6.706 -28.976 1.00 37.30 O
ATOM 5 O5' C B 246 -40.112 7.172 -31.322 1.00 37.30 O
ATOM 6 C5' C B 246 -41.104 7.367 -32.303 1.00 37.30 C
ATOM 7 C4' C B 246 -40.503 7.694 -33.639 1.00 37.30 C
ATOM 8 O4' C B 246 -39.908 9.025 -33.610 1.00 37.30 O
ATOM 9 C3' C B 246 -39.355 6.814 -34.100 1.00 37.30 C
ATOM 10 O3' C B 246 -39.759 5.525 -34.544 1.00 37.30 O
ATOM 11 C2' C B 246 -38.734 7.686 -35.184 1.00 37.30 C
ATOM 12 O2' C B 246 -39.552 7.709 -36.356 1.00 37.30 O
ATOM 13 C1' C B 246 -38.814 9.063 -34.514 1.00 37.30 C
ATOM 14 N1 C B 246 -37.563 9.400 -33.764 1.00 37.28 N
ATOM 15 C2 C B 246 -36.519 10.014 -34.488 1.00 37.28 C
ATOM 16 O2 C B 246 -36.678 10.243 -35.705 1.00 37.28 O
ATOM 17 N3 C B 246 -35.360 10.343 -33.858 1.00 37.28 N
ATOM 18 C4 C B 246 -35.215 10.087 -32.561 1.00 37.28 C
ATOM 19 N4 C B 246 -34.051 10.430 -32.009 1.00 37.28 N
ATOM 20 C5 C B 246 -36.249 9.463 -31.792 1.00 37.28 C
ATOM 21 C6 C B 246 -37.391 9.140 -32.424 1.00 37.28 C
ATOM 22 P U B 247 -38.722 4.286 -34.476 1.00 47.72 P
ATOM 23 OP1 U B 247 -39.380 3.116 -35.127 1.00 47.72 O
ATOM 24 OP2 U B 247 -38.277 4.164 -33.057 1.00 47.72 O
ATOM 25 O5' U B 247 -37.512 4.790 -35.382 1.00 47.72 O
TER
ATOM 2 P A A 280 -46.101 16.255 -38.969 1.00 24.45 P
ATOM 3 OP1 A A 280 -46.126 17.081 -40.192 1.00 24.45 O
ATOM 4 OP2 A A 280 -47.399 15.805 -38.394 1.00 24.45 O
ATOM 5 O5' A A 280 -45.120 15.011 -39.177 1.00 24.45 O
ATOM 6 C5' A A 280 -43.971 15.121 -40.000 1.00 24.45 C
ATOM 7 C4' A A 280 -42.709 14.795 -39.244 1.00 24.45 C
ATOM 8 O4' A A 280 -42.757 15.407 -37.932 1.00 24.45 O
ATOM 9 C3' A A 280 -42.462 13.323 -38.947 1.00 24.45 C
ATOM 10 O3' A A 280 -41.934 12.603 -40.050 1.00 24.45 O
ATOM 11 C2' A A 280 -41.532 13.380 -37.748 1.00 24.45 C
ATOM 12 O2' A A 280 -40.203 13.662 -38.146 1.00 24.45 O
ATOM 13 C1' A A 280 -42.085 14.588 -36.997 1.00 24.45 C
ATOM 14 N9 A A 280 -43.041 14.193 -35.947 1.00 25.01 N
ATOM 15 C8 A A 280 -44.295 14.714 -35.723 1.00 25.01 C
ATOM 16 N7 A A 280 -44.932 14.165 -34.712 1.00 25.01 N
ATOM 17 C5 A A 280 -44.034 13.230 -34.240 1.00 25.01 C
ATOM 18 C6 A A 280 -44.124 12.336 -33.183 1.00 25.01 C
ATOM 19 N6 A A 280 -45.199 12.263 -32.403 1.00 25.01 N
ATOM 20 N1 A A 280 -43.073 11.530 -32.955 1.00 25.01 N
ATOM 21 C2 A A 280 -42.010 11.631 -33.756 1.00 25.01 C
ATOM 22 N3 A A 280 -41.812 12.446 -34.785 1.00 25.01 N
ATOM 23 C4 A A 280 -42.872 13.231 -34.979 1.00 25.01 C
ATOM 24 P U A 281 -42.904 11.646 -40.908 1.00 25.03 P
ATOM 25 OP1 U A 281 -42.201 11.320 -42.170 1.00 25.03 O
ATOM 26 OP2 U A 281 -44.225 12.339 -40.991 1.00 25.03 O
ATOM 27 O5' U A 281 -43.041 10.331 -39.985 1.00 25.03 O
TER
ATOM 1 O3' G B 245 -41.618 7.685 -29.406 1.00 35.28 O
ATOM 2 P C B 246 -40.511 6.615 -29.900 1.00 37.30 P
ATOM 3 OP1 C B 246 -41.191 5.314 -30.054 1.00 37.30 O
ATOM 4 OP2 C B 246 -39.358 6.706 -28.976 1.00 37.30 O
ATOM 5 O5' C B 246 -40.112 7.172 -31.322 1.00 37.30 O
ATOM 6 C5' C B 246 -41.104 7.367 -32.303 1.00 37.30 C
ATOM 7 C4' C B 246 -40.503 7.694 -33.639 1.00 37.30 C
ATOM 8 O4' C B 246 -39.908 9.025 -33.610 1.00 37.30 O
ATOM 9 C3' C B 246 -39.355 6.814 -34.100 1.00 37.30 C
ATOM 10 O3' C B 246 -39.759 5.525 -34.544 1.00 37.30 O
ATOM 11 C2' C B 246 -38.734 7.686 -35.184 1.00 37.30 C
ATOM 12 O2' C B 246 -39.552 7.709 -36.356 1.00 37.30 O
ATOM 13 C1' C B 246 -38.814 9.063 -34.514 1.00 37.30 C
ATOM 14 N1 C B 246 -37.563 9.400 -33.764 1.00 37.28 N
ATOM 15 C2 C B 246 -36.519 10.014 -34.488 1.00 37.28 C
ATOM 16 O2 C B 246 -36.678 10.243 -35.705 1.00 37.28 O
ATOM 17 N3 C B 246 -35.360 10.343 -33.858 1.00 37.28 N
ATOM 18 C4 C B 246 -35.215 10.087 -32.561 1.00 37.28 C
ATOM 19 N4 C B 246 -34.051 10.430 -32.009 1.00 37.28 N
ATOM 20 C5 C B 246 -36.249 9.463 -31.792 1.00 37.28 C
ATOM 21 C6 C B 246 -37.391 9.140 -32.424 1.00 37.28 C
ATOM 22 P U B 247 -38.722 4.286 -34.476 1.00 47.72 P
ATOM 23 OP1 U B 247 -39.380 3.116 -35.127 1.00 47.72 O
ATOM 24 OP2 U B 247 -38.277 4.164 -33.057 1.00 47.72 O
ATOM 25 O5' U B 247 -37.512 4.790 -35.382 1.00 47.72 O
TER
Atoms:
OP1: (-46.126,17.081,-40.192)
OP2: (-47.399,15.805,-38.394)
C3': (-42.462,13.323,-38.947)
C1': (-42.085,14.588,-36.997)
C5': (-43.971,15.121,-40.000)
O4': (-42.757,15.407,-37.932)
C8: (-44.295,14.714,-35.723)
O2': (-40.203,13.662,-38.146)
C6: (-44.124,12.336,-33.183)
C5: (-44.034,13.230,-34.240)
C4: (-42.872,13.231,-34.979)
P: (-46.101,16.255,-38.969)
C4': (-42.709,14.795,-39.244)
C2': (-41.532,13.380,-37.748)
C2: (-42.010,11.631,-33.756)
N1: (-43.073,11.530,-32.955)
N3: (-41.812,12.446,-34.785)
N6: (-45.199,12.263,-32.403)
N7: (-44.932,14.165,-34.712)
N9: (-43.041,14.193,-35.947)
O5': (-45.120,15.011,-39.177)
O3': (-41.934,12.603,-40.050)
OP2: (-47.399,15.805,-38.394)
C3': (-42.462,13.323,-38.947)
C1': (-42.085,14.588,-36.997)
C5': (-43.971,15.121,-40.000)
O4': (-42.757,15.407,-37.932)
C8: (-44.295,14.714,-35.723)
O2': (-40.203,13.662,-38.146)
C6: (-44.124,12.336,-33.183)
C5: (-44.034,13.230,-34.240)
C4: (-42.872,13.231,-34.979)
P: (-46.101,16.255,-38.969)
C4': (-42.709,14.795,-39.244)
C2': (-41.532,13.380,-37.748)
C2: (-42.010,11.631,-33.756)
N1: (-43.073,11.530,-32.955)
N3: (-41.812,12.446,-34.785)
N6: (-45.199,12.263,-32.403)
N7: (-44.932,14.165,-34.712)
N9: (-43.041,14.193,-35.947)
O5': (-45.120,15.011,-39.177)
O3': (-41.934,12.603,-40.050)
C2: (-36.519,10.014,-34.488)
OP1: (-41.191,5.314,-30.054)
OP2: (-39.358,6.706,-28.976)
C4: (-35.215,10.087,-32.561)
O5': (-40.112,7.172,-31.322)
C3': (-39.355,6.814,-34.100)
C1': (-38.814,9.063,-34.514)
O4': (-39.908,9.025,-33.610)
C5': (-41.104,7.367,-32.303)
P: (-40.511,6.615,-29.900)
O2: (-36.678,10.243,-35.705)
C4': (-40.503,7.694,-33.639)
C2': (-38.734,7.686,-35.184)
O2': (-39.552,7.709,-36.356)
N1: (-37.563,9.400,-33.764)
N3: (-35.360,10.343,-33.858)
N4: (-34.051,10.430,-32.009)
C6: (-37.391,9.140,-32.424)
C5: (-36.249,9.463,-31.792)
O3': (-39.759,5.525,-34.544)
OP1: (-41.191,5.314,-30.054)
OP2: (-39.358,6.706,-28.976)
C4: (-35.215,10.087,-32.561)
O5': (-40.112,7.172,-31.322)
C3': (-39.355,6.814,-34.100)
C1': (-38.814,9.063,-34.514)
O4': (-39.908,9.025,-33.610)
C5': (-41.104,7.367,-32.303)
P: (-40.511,6.615,-29.900)
O2: (-36.678,10.243,-35.705)
C4': (-40.503,7.694,-33.639)
C2': (-38.734,7.686,-35.184)
O2': (-39.552,7.709,-36.356)
N1: (-37.563,9.400,-33.764)
N3: (-35.360,10.343,-33.858)
N4: (-34.051,10.430,-32.009)
C6: (-37.391,9.140,-32.424)
C5: (-36.249,9.463,-31.792)
O3': (-39.759,5.525,-34.544)
Image (generated by PyMOL):