Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01223:0553
Extra
PDB:
ATOM 1 O3' C A1222 7.687 89.073 97.808 1.00 40.20 O
ATOM 2 P U A1223 7.379 89.180 96.239 1.00 41.80 P
ATOM 3 OP1 U A1223 6.535 88.017 95.853 1.00 40.85 O
ATOM 4 OP2 U A1223 8.668 89.396 95.550 1.00 40.64 O
ATOM 5 O5' U A1223 6.515 90.514 96.139 1.00 38.09 O
ATOM 6 C5' U A1223 5.200 90.559 96.713 1.00 37.71 C
ATOM 7 C4' U A1223 4.647 91.962 96.697 1.00 37.34 C
ATOM 8 O4' U A1223 5.443 92.826 97.548 1.00 38.77 O
ATOM 9 C3' U A1223 4.655 92.693 95.372 1.00 36.37 C
ATOM 10 O3' U A1223 3.613 92.294 94.513 1.00 39.61 O
ATOM 11 C2' U A1223 4.479 94.129 95.821 1.00 36.56 C
ATOM 12 O2' U A1223 3.160 94.403 96.215 1.00 33.31 O
ATOM 13 C1' U A1223 5.384 94.158 97.049 1.00 38.15 C
ATOM 14 N1 U A1223 6.741 94.602 96.686 1.00 40.29 N
ATOM 15 C2 U A1223 6.977 95.967 96.669 1.00 40.30 C
ATOM 16 O2 U A1223 6.126 96.791 96.957 1.00 38.37 O
ATOM 17 N3 U A1223 8.248 96.330 96.298 1.00 41.86 N
ATOM 18 C4 U A1223 9.282 95.491 95.947 1.00 41.23 C
ATOM 19 O4 U A1223 10.354 95.977 95.591 1.00 43.00 O
ATOM 20 C5 U A1223 8.967 94.095 95.999 1.00 38.98 C
ATOM 21 C6 U A1223 7.743 93.706 96.358 1.00 38.81 C
ATOM 22 P G A1224 3.733 92.595 92.941 1.00 41.78 P
ATOM 23 OP1 G A1224 2.842 91.629 92.244 1.00 40.29 O
ATOM 24 OP2 G A1224 5.174 92.648 92.585 1.00 41.54 O
ATOM 25 O5' G A1224 3.134 94.061 92.796 1.00 39.39 O
TER
ATOM 1 O3' G B 552 -5.722 94.699 96.748 1.00 51.06 O
ATOM 2 P A B 553 -5.200 93.784 97.968 1.00 52.97 P
ATOM 3 OP1 A B 553 -5.738 92.412 97.772 1.00 49.89 O
ATOM 4 OP2 A B 553 -5.399 94.479 99.273 1.00 49.07 O
ATOM 5 O5' A B 553 -3.639 93.675 97.679 1.00 52.35 O
ATOM 6 C5' A B 553 -3.174 93.023 96.482 1.00 51.78 C
ATOM 7 C4' A B 553 -1.676 93.120 96.368 1.00 50.34 C
ATOM 8 O4' A B 553 -1.275 94.469 96.020 1.00 48.74 O
ATOM 9 C3' A B 553 -0.894 92.834 97.634 1.00 49.12 C
ATOM 10 O3' A B 553 -0.785 91.445 97.880 1.00 47.47 O
ATOM 11 C2' A B 553 0.448 93.461 97.305 1.00 48.07 C
ATOM 12 O2' A B 553 1.159 92.623 96.412 1.00 46.88 O
ATOM 13 C1' A B 553 0.006 94.729 96.569 1.00 47.13 C
ATOM 14 N9 A B 553 -0.084 95.939 97.390 1.00 46.67 N
ATOM 15 C8 A B 553 -1.208 96.478 97.965 1.00 47.44 C
ATOM 16 N7 A B 553 -0.994 97.616 98.584 1.00 47.62 N
ATOM 17 C5 A B 553 0.366 97.837 98.419 1.00 46.48 C
ATOM 18 C6 A B 553 1.217 98.887 98.833 1.00 46.77 C
ATOM 19 N6 A B 553 0.803 99.957 99.516 1.00 46.54 N
ATOM 20 N1 A B 553 2.523 98.799 98.512 1.00 45.12 N
ATOM 21 C2 A B 553 2.941 97.729 97.823 1.00 46.61 C
ATOM 22 N3 A B 553 2.245 96.686 97.373 1.00 46.84 N
ATOM 23 C4 A B 553 0.946 96.801 97.706 1.00 47.49 C
ATOM 24 P A B 554 -0.899 90.901 99.386 1.00 48.23 P
ATOM 25 OP1 A B 554 -1.059 89.421 99.299 1.00 46.18 O
ATOM 26 OP2 A B 554 -1.908 91.717 100.113 1.00 47.89 O
ATOM 27 O5' A B 554 0.514 91.234 100.043 1.00 48.59 O
TER
ATOM 2 P U A1223 7.379 89.180 96.239 1.00 41.80 P
ATOM 3 OP1 U A1223 6.535 88.017 95.853 1.00 40.85 O
ATOM 4 OP2 U A1223 8.668 89.396 95.550 1.00 40.64 O
ATOM 5 O5' U A1223 6.515 90.514 96.139 1.00 38.09 O
ATOM 6 C5' U A1223 5.200 90.559 96.713 1.00 37.71 C
ATOM 7 C4' U A1223 4.647 91.962 96.697 1.00 37.34 C
ATOM 8 O4' U A1223 5.443 92.826 97.548 1.00 38.77 O
ATOM 9 C3' U A1223 4.655 92.693 95.372 1.00 36.37 C
ATOM 10 O3' U A1223 3.613 92.294 94.513 1.00 39.61 O
ATOM 11 C2' U A1223 4.479 94.129 95.821 1.00 36.56 C
ATOM 12 O2' U A1223 3.160 94.403 96.215 1.00 33.31 O
ATOM 13 C1' U A1223 5.384 94.158 97.049 1.00 38.15 C
ATOM 14 N1 U A1223 6.741 94.602 96.686 1.00 40.29 N
ATOM 15 C2 U A1223 6.977 95.967 96.669 1.00 40.30 C
ATOM 16 O2 U A1223 6.126 96.791 96.957 1.00 38.37 O
ATOM 17 N3 U A1223 8.248 96.330 96.298 1.00 41.86 N
ATOM 18 C4 U A1223 9.282 95.491 95.947 1.00 41.23 C
ATOM 19 O4 U A1223 10.354 95.977 95.591 1.00 43.00 O
ATOM 20 C5 U A1223 8.967 94.095 95.999 1.00 38.98 C
ATOM 21 C6 U A1223 7.743 93.706 96.358 1.00 38.81 C
ATOM 22 P G A1224 3.733 92.595 92.941 1.00 41.78 P
ATOM 23 OP1 G A1224 2.842 91.629 92.244 1.00 40.29 O
ATOM 24 OP2 G A1224 5.174 92.648 92.585 1.00 41.54 O
ATOM 25 O5' G A1224 3.134 94.061 92.796 1.00 39.39 O
TER
ATOM 1 O3' G B 552 -5.722 94.699 96.748 1.00 51.06 O
ATOM 2 P A B 553 -5.200 93.784 97.968 1.00 52.97 P
ATOM 3 OP1 A B 553 -5.738 92.412 97.772 1.00 49.89 O
ATOM 4 OP2 A B 553 -5.399 94.479 99.273 1.00 49.07 O
ATOM 5 O5' A B 553 -3.639 93.675 97.679 1.00 52.35 O
ATOM 6 C5' A B 553 -3.174 93.023 96.482 1.00 51.78 C
ATOM 7 C4' A B 553 -1.676 93.120 96.368 1.00 50.34 C
ATOM 8 O4' A B 553 -1.275 94.469 96.020 1.00 48.74 O
ATOM 9 C3' A B 553 -0.894 92.834 97.634 1.00 49.12 C
ATOM 10 O3' A B 553 -0.785 91.445 97.880 1.00 47.47 O
ATOM 11 C2' A B 553 0.448 93.461 97.305 1.00 48.07 C
ATOM 12 O2' A B 553 1.159 92.623 96.412 1.00 46.88 O
ATOM 13 C1' A B 553 0.006 94.729 96.569 1.00 47.13 C
ATOM 14 N9 A B 553 -0.084 95.939 97.390 1.00 46.67 N
ATOM 15 C8 A B 553 -1.208 96.478 97.965 1.00 47.44 C
ATOM 16 N7 A B 553 -0.994 97.616 98.584 1.00 47.62 N
ATOM 17 C5 A B 553 0.366 97.837 98.419 1.00 46.48 C
ATOM 18 C6 A B 553 1.217 98.887 98.833 1.00 46.77 C
ATOM 19 N6 A B 553 0.803 99.957 99.516 1.00 46.54 N
ATOM 20 N1 A B 553 2.523 98.799 98.512 1.00 45.12 N
ATOM 21 C2 A B 553 2.941 97.729 97.823 1.00 46.61 C
ATOM 22 N3 A B 553 2.245 96.686 97.373 1.00 46.84 N
ATOM 23 C4 A B 553 0.946 96.801 97.706 1.00 47.49 C
ATOM 24 P A B 554 -0.899 90.901 99.386 1.00 48.23 P
ATOM 25 OP1 A B 554 -1.059 89.421 99.299 1.00 46.18 O
ATOM 26 OP2 A B 554 -1.908 91.717 100.113 1.00 47.89 O
ATOM 27 O5' A B 554 0.514 91.234 100.043 1.00 48.59 O
TER
Atoms:
C4: (9.282,95.491,95.947)
N3: (8.248,96.330,96.298)
OP1: (6.535,88.017,95.853)
OP2: (8.668,89.396,95.550)
C2: (6.977,95.967,96.669)
C1': (5.384,94.158,97.049)
C3': (4.655,92.693,95.372)
O5': (6.515,90.514,96.139)
O4': (5.443,92.826,97.548)
C5': (5.200,90.559,96.713)
P: (7.379,89.180,96.239)
C4': (4.647,91.962,96.697)
C2': (4.479,94.129,95.821)
O2': (3.160,94.403,96.215)
N1: (6.741,94.602,96.686)
O4: (10.354,95.977,95.591)
O2: (6.126,96.791,96.957)
C6: (7.743,93.706,96.358)
C5: (8.967,94.095,95.999)
O3': (3.613,92.294,94.513)
N3: (8.248,96.330,96.298)
OP1: (6.535,88.017,95.853)
OP2: (8.668,89.396,95.550)
C2: (6.977,95.967,96.669)
C1': (5.384,94.158,97.049)
C3': (4.655,92.693,95.372)
O5': (6.515,90.514,96.139)
O4': (5.443,92.826,97.548)
C5': (5.200,90.559,96.713)
P: (7.379,89.180,96.239)
C4': (4.647,91.962,96.697)
C2': (4.479,94.129,95.821)
O2': (3.160,94.403,96.215)
N1: (6.741,94.602,96.686)
O4: (10.354,95.977,95.591)
O2: (6.126,96.791,96.957)
C6: (7.743,93.706,96.358)
C5: (8.967,94.095,95.999)
O3': (3.613,92.294,94.513)
OP1: (-5.738,92.412,97.772)
OP2: (-5.399,94.479,99.273)
C3': (-0.894,92.834,97.634)
C1': (0.006,94.729,96.569)
C5': (-3.174,93.023,96.482)
O4': (-1.275,94.469,96.020)
C8: (-1.208,96.478,97.965)
O2': (1.159,92.623,96.412)
C6: (1.217,98.887,98.833)
C5: (0.366,97.837,98.419)
C4: (0.946,96.801,97.706)
P: (-5.200,93.784,97.968)
C4': (-1.676,93.120,96.368)
C2': (0.448,93.461,97.305)
C2: (2.941,97.729,97.823)
N1: (2.523,98.799,98.512)
N3: (2.245,96.686,97.373)
N6: (0.803,99.957,99.516)
N7: (-0.994,97.616,98.584)
N9: (-0.084,95.939,97.390)
O5': (-3.639,93.675,97.679)
O3': (-0.785,91.445,97.880)
OP2: (-5.399,94.479,99.273)
C3': (-0.894,92.834,97.634)
C1': (0.006,94.729,96.569)
C5': (-3.174,93.023,96.482)
O4': (-1.275,94.469,96.020)
C8: (-1.208,96.478,97.965)
O2': (1.159,92.623,96.412)
C6: (1.217,98.887,98.833)
C5: (0.366,97.837,98.419)
C4: (0.946,96.801,97.706)
P: (-5.200,93.784,97.968)
C4': (-1.676,93.120,96.368)
C2': (0.448,93.461,97.305)
C2: (2.941,97.729,97.823)
N1: (2.523,98.799,98.512)
N3: (2.245,96.686,97.373)
N6: (0.803,99.957,99.516)
N7: (-0.994,97.616,98.584)
N9: (-0.084,95.939,97.390)
O5': (-3.639,93.675,97.679)
O3': (-0.785,91.445,97.880)
Image (generated by PyMOL):